RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 SPAARA0A1B0GVQ0 90 aa17.04■□□□□ 0.32
DDR1-229ENST00000396342 TRIM49BA6NDI0 452 aa17.04■□□□□ 0.32
DDR1-229ENST00000396342 PMM2O15305 246 aa17.04■□□□□ 0.32
DDR1-229ENST00000396342 TBL1XO60907 577 aa17.04■□□□□ 0.32
DDR1-229ENST00000396342 APOEP02649 317 aa17.04■□□□□ 0.32
DDR1-229ENST00000396342 ASLP04424 464 aa17.04■□□□□ 0.32
DDR1-229ENST00000396342 DLDP09622 509 aaKnown RBP17.04■□□□□ 0.32
DDR1-229ENST00000396342 NNMTP40261 264 aa17.04■□□□□ 0.32
DDR1-229ENST00000396342 MATKP42679 507 aa17.04■□□□□ 0.32
DDR1-229ENST00000396342 SNX16P57768 344 aa17.04■□□□□ 0.32
DDR1-229ENST00000396342 RING1Q06587 406 aa17.04■□□□□ 0.32
DDR1-229ENST00000396342 CDH18Q13634 790 aa17.04■□□□□ 0.32
DDR1-229ENST00000396342 TRIP6Q15654 476 aaKnown RBP17.04■□□□□ 0.32
DDR1-229ENST00000396342 ISM2Q6H9L7 571 aa17.04■□□□□ 0.32
DDR1-229ENST00000396342 ADAT2Q7Z6V5 191 aaKnown RBP17.04■□□□□ 0.32
DDR1-229ENST00000396342 PIP4P1Q86T03 277 aa17.04■□□□□ 0.32
DDR1-229ENST00000396342 MFN1Q8IWA4 741 aa17.04■□□□□ 0.32
DDR1-229ENST00000396342 FAM217AQ8IXS0 508 aa17.04■□□□□ 0.32
DDR1-229ENST00000396342 ZC3H3Q8IXZ2 948 aaKnown RBP17.04■□□□□ 0.32
DDR1-229ENST00000396342 ELOA2Q8IYF1 753 aaPredicted RBP17.04■□□□□ 0.32
DDR1-229ENST00000396342 ZCCHC9Q8N567 271 aaKnown RBP17.04■□□□□ 0.32
DDR1-229ENST00000396342 RBBP8NLQ8NC74 664 aaPredicted RBP17.04■□□□□ 0.32
DDR1-229ENST00000396342 NELFBQ8WX92 580 aa17.04■□□□□ 0.32
DDR1-229ENST00000396342 NDRG1Q92597 394 aaKnown RBP17.04■□□□□ 0.32
DDR1-229ENST00000396342 BTBD1Q9H0C5 482 aa17.04■□□□□ 0.32
DDR1-229ENST00000396342 FSCN3Q9NQT6 498 aa17.04■□□□□ 0.32
DDR1-229ENST00000396342 THADAQ6YHU6 1953 aa17.03■□□□□ 0.32
DDR1-229ENST00000396342 METTL12A8MUP2 240 aa17.03■□□□□ 0.32
DDR1-229ENST00000396342 TULP2O00295 520 aa17.03■□□□□ 0.32
DDR1-229ENST00000396342 MSI1O43347 362 aaKnown RBP17.03■□□□□ 0.32
DDR1-229ENST00000396342 MAOBP27338 520 aa17.03■□□□□ 0.32
DDR1-229ENST00000396342 HOXD9P28356 352 aaPredicted RBP17.03■□□□□ 0.32
DDR1-229ENST00000396342 AFF3P51826 1226 aaKnown RBP17.03■□□□□ 0.32
DDR1-229ENST00000396342 GCNT1Q02742 428 aa17.03■□□□□ 0.32
DDR1-229ENST00000396342 GRIK2Q13002 908 aa17.03■□□□□ 0.32
DDR1-229ENST00000396342 ENPP2Q13822 863 aa17.03■□□□□ 0.32
DDR1-229ENST00000396342 INAVAQ3KP66 663 aa17.03■□□□□ 0.32
DDR1-229ENST00000396342 MBLAC2Q68D91 279 aa17.03■□□□□ 0.32
DDR1-229ENST00000396342 ZNF776Q68DI1 518 aaPredicted RBP17.03■□□□□ 0.32
DDR1-229ENST00000396342 CREBRFQ8IUR6 639 aa17.03■□□□□ 0.32
DDR1-229ENST00000396342 NAXDQ8IW45 347 aa17.03■□□□□ 0.32
DDR1-229ENST00000396342 SORCS1Q8WY21 1168 aa17.03■□□□□ 0.32
DDR1-229ENST00000396342 DNASE2BQ8WZ79 361 aa17.03■□□□□ 0.32
DDR1-229ENST00000396342 AZIN2Q96A70 460 aa17.03■□□□□ 0.32
DDR1-229ENST00000396342 PPP1R9BQ96SB3 815 aa17.03■□□□□ 0.32
DDR1-229ENST00000396342 MIS12Q9H081 205 aa17.03■□□□□ 0.32
DDR1-229ENST00000396342 CD248Q9HCU0 757 aa17.03■□□□□ 0.32
DDR1-229ENST00000396342 STIM2Q9P246 746 aa17.03■□□□□ 0.32
DDR1-229ENST00000396342 TJP2Q9UDY2 1190 aa17.03■□□□□ 0.32
DDR1-229ENST00000396342 STOML2Q9UJZ1 356 aa17.03■□□□□ 0.32
DDR1-229ENST00000396342 SCML1Q9UN30 329 aa17.03■□□□□ 0.32
DDR1-229ENST00000396342 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.03■□□□□ 0.32
DDR1-229ENST00000396342 ABCA7Q8IZY2 2146 aa17.02■□□□□ 0.32
DDR1-229ENST00000396342 C1QTNF9BB2RNN3 333 aa17.02■□□□□ 0.32
DDR1-229ENST00000396342 HYAL3O43820 417 aaPredicted RBP17.02■□□□□ 0.32
DDR1-229ENST00000396342 ACSL4O60488 711 aa17.02■□□□□ 0.32
DDR1-229ENST00000396342 AFPP02771 609 aaKnown RBP17.02■□□□□ 0.32
DDR1-229ENST00000396342 C1QTNF9P0C862 333 aa17.02■□□□□ 0.32
DDR1-229ENST00000396342 SPINK2P20155 84 aa17.02■□□□□ 0.32
DDR1-229ENST00000396342 PRKCHP24723 683 aa17.02■□□□□ 0.32
DDR1-229ENST00000396342 BRD2P25440 801 aaKnown RBP17.02■□□□□ 0.32
DDR1-229ENST00000396342 CAMK2GQ13555 558 aaPredicted RBP17.02■□□□□ 0.32
DDR1-229ENST00000396342 MSANTD2Q6P1R3 559 aa17.02■□□□□ 0.32
DDR1-229ENST00000396342 RRAGAQ7L523 313 aa17.02■□□□□ 0.32
DDR1-229ENST00000396342 ENOSF1Q7L5Y1 443 aa17.02■□□□□ 0.32
DDR1-229ENST00000396342 EHBP1Q8NDI1 1231 aa17.02■□□□□ 0.32
DDR1-229ENST00000396342 SPATA20Q8TB22 786 aa17.02■□□□□ 0.32
DDR1-229ENST00000396342 CYB5D2Q8WUJ1 264 aa17.02■□□□□ 0.32
DDR1-229ENST00000396342 SLC35F5Q8WV83 523 aa17.02■□□□□ 0.32
DDR1-229ENST00000396342 MED15Q96RN5 788 aa17.02■□□□□ 0.32
DDR1-229ENST00000396342 CDC6Q99741 560 aa17.02■□□□□ 0.32
DDR1-229ENST00000396342 SGK2Q9HBY8 427 aa17.02■□□□□ 0.32
DDR1-229ENST00000396342 EIF2B4Q9UI10 523 aaKnown RBP17.02■□□□□ 0.32
DDR1-229ENST00000396342 MSRB2Q9Y3D2 182 aa17.02■□□□□ 0.32
DDR1-229ENST00000396342 PIK3R2O00459 728 aa17.01■□□□□ 0.31
DDR1-229ENST00000396342 SH3BP5O60239 455 aa17.01■□□□□ 0.31
DDR1-229ENST00000396342 HLA-EP13747 358 aa17.01■□□□□ 0.31
DDR1-229ENST00000396342 HLA-FP30511 346 aa17.01■□□□□ 0.31
DDR1-229ENST00000396342 PMS1P54277 932 aaKnown RBP17.01■□□□□ 0.31
DDR1-229ENST00000396342 PAK1Q13153 545 aa17.01■□□□□ 0.31
DDR1-229ENST00000396342 PMF1Q6P1K2 205 aa17.01■□□□□ 0.31
DDR1-229ENST00000396342 FOXR2Q6PJQ5 311 aa17.01■□□□□ 0.31
DDR1-229ENST00000396342 CARNMT1Q8N4J0 409 aa17.01■□□□□ 0.31
DDR1-229ENST00000396342 ZCCHC14Q8WYQ9 949 aaKnown RBP17.01■□□□□ 0.31
DDR1-229ENST00000396342 ERCC4Q92889 916 aaPredicted RBP17.01■□□□□ 0.31
DDR1-229ENST00000396342 RNF34Q969K3 372 aa17.01■□□□□ 0.31
DDR1-229ENST00000396342 NOX5Q96PH1 765 aa17.01■□□□□ 0.31
DDR1-229ENST00000396342 GAREM1Q9H706 876 aa17.01■□□□□ 0.31
DDR1-229ENST00000396342 MAN1B1Q9UKM7 699 aa17.01■□□□□ 0.31
DDR1-229ENST00000396342 ZMIZ1Q9ULJ6 1067 aa17.01■□□□□ 0.31
DDR1-229ENST00000396342 CTNND2Q9UQB3 1225 aa17.01■□□□□ 0.31
DDR1-229ENST00000396342 TLR6Q9Y2C9 796 aa17.01■□□□□ 0.31
DDR1-229ENST00000396342 FSBPO95073 299 aa17■□□□□ 0.31
DDR1-229ENST00000396342 SEMA4FO95754 770 aa17■□□□□ 0.31
DDR1-229ENST00000396342 IGLV3-19P01714 112 aa17■□□□□ 0.31
DDR1-229ENST00000396342 SLC2A3P11169 496 aa17■□□□□ 0.31
DDR1-229ENST00000396342 USP8P40818 1118 aa17■□□□□ 0.31
DDR1-229ENST00000396342 OXCT1P55809 520 aa17■□□□□ 0.31
DDR1-229ENST00000396342 C21orf59P57076 290 aa17■□□□□ 0.31
DDR1-229ENST00000396342 KCNH2Q12809 1159 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms