RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 PSMD12O00232 456 aaPredicted RBP9.14□□□□□ -0.95
MSH5-205ENST00000395853 C2CD2LO14523 706 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 MSI1O43347 362 aaKnown RBP9.14□□□□□ -0.95
MSH5-205ENST00000395853 PI15O43692 258 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 IFNA14P01570 189 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 PLCG1P19174 1290 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 ITIH1P19827 911 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 RRM2P31350 389 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 MAGEA1P43355 309 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 AP2S1P53680 142 aaPredicted RBP9.14□□□□□ -0.95
MSH5-205ENST00000395853 S100A12P80511 92 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 MYBPC1Q00872 1141 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 GALK2Q01415 458 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 ENPEPQ07075 957 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 TFDP1Q14186 410 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 POU6F1Q14863 301 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 TAF1CQ15572 869 aaPredicted RBP9.14□□□□□ -0.95
MSH5-205ENST00000395853 SPDYE2Q495Y8 402 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 BRDTQ58F21 947 aaPredicted RBP9.14□□□□□ -0.95
MSH5-205ENST00000395853 ATAD3BQ5T9A4 648 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 FCRLBQ6BAA4 426 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 GPR180Q86V85 440 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 CLEC10AQ8IUN9 316 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 FAM109AQ8N4B1 249 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 STAMQ92783 540 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 TOE1Q96GM8 510 aaKnown RBP9.14□□□□□ -0.95
MSH5-205ENST00000395853 GCNAQ96QF7 691 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 PANX3Q96QZ0 392 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 PIP5K1AQ99755 562 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 ZSCAN5AQ9BUG6 496 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 TTYH3Q9C0H2 523 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 VAT1LQ9HCJ6 419 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 SH3GLB2Q9NR46 395 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.14□□□□□ -0.95
MSH5-205ENST00000395853 SIK3Q9Y2K2 1263 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 PCDHAC2Q9Y5I4 1007 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 USP17L5A8MUK1 530 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 FTCDO95954 541 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 FAM58BPP0C7Q3 252 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 SRGAP2CP0DJJ0 459 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 SRGAP2BP0DMP2 458 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 KRT3P12035 628 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 CALML3P27482 149 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 ALDH3B2P48448 385 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 NT5C2P49902 561 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 ERFP50548 548 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 EHHADHQ08426 723 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 SNAPC2Q13487 334 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 C6orf10Q5SRN2 563 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 TATDN1Q6P1N9 297 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 SPATA2LQ8IUW3 424 aaPredicted RBP9.14□□□□□ -0.95
MSH5-205ENST00000395853 C4orf32Q8N8J7 132 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 SLC44A1Q8WWI5 657 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 ROPN1BQ9BZX4 212 aaPredicted RBP9.14□□□□□ -0.95
MSH5-205ENST00000395853 ROPN1Q9HAT0 212 aaPredicted RBP9.14□□□□□ -0.95
MSH5-205ENST00000395853 SLC7A8Q9UHI5 535 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 SERPINA10Q9UK55 444 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 DNAJC12Q9UKB3 198 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 GMEB2Q9UKD1 530 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 PCDHA6Q9UN73 950 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 FZD1Q9UP38 647 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 PCDHA8Q9Y5H6 950 aa9.14□□□□□ -0.95
MSH5-205ENST00000395853 MAGEB2O15479 319 aa9.13□□□□□ -0.95
MSH5-205ENST00000395853 PEX1O43933 1283 aa9.13□□□□□ -0.95
MSH5-205ENST00000395853 PALMO75781 387 aa9.13□□□□□ -0.95
MSH5-205ENST00000395853 BMP15O95972 392 aa9.13□□□□□ -0.95
MSH5-205ENST00000395853 KRT10P13645 584 aa9.13□□□□□ -0.95
MSH5-205ENST00000395853 BRAFP15056 766 aa9.13□□□□□ -0.95
MSH5-205ENST00000395853 AKR1B1P15121 316 aa9.13□□□□□ -0.95
MSH5-205ENST00000395853 CREB1P16220 341 aa9.13□□□□□ -0.95
MSH5-205ENST00000395853 FOXN2P32314 431 aa9.13□□□□□ -0.95
MSH5-205ENST00000395853 PTPN5P54829 565 aa9.13□□□□□ -0.95
MSH5-205ENST00000395853 GABPAQ06546 454 aa9.13□□□□□ -0.95
MSH5-205ENST00000395853 SNX17Q15036 470 aa9.13□□□□□ -0.95
MSH5-205ENST00000395853 Q3ZCU0 254 aa9.13□□□□□ -0.95
MSH5-205ENST00000395853 ARSHQ5FYA8 562 aa9.13□□□□□ -0.95
MSH5-205ENST00000395853 FAM209BQ5JX69 171 aa9.13□□□□□ -0.95
MSH5-205ENST00000395853 MEI1Q5TIA1 1274 aa9.13□□□□□ -0.95
MSH5-205ENST00000395853 C1orf146Q5VVC0 180 aa9.13□□□□□ -0.95
MSH5-205ENST00000395853 PGM2L1Q6PCE3 622 aa9.13□□□□□ -0.95
MSH5-205ENST00000395853 AMIGO2Q86SJ2 522 aa9.13□□□□□ -0.95
MSH5-205ENST00000395853 TTC7BQ86TV6 843 aa9.13□□□□□ -0.95
MSH5-205ENST00000395853 SMYD4Q8IYR2 804 aaPredicted RBP9.13□□□□□ -0.95
MSH5-205ENST00000395853 LRRC71Q8N4P6 559 aa9.13□□□□□ -0.95
MSH5-205ENST00000395853 BRI3BPQ8WY22 251 aa9.13□□□□□ -0.95
MSH5-205ENST00000395853 TMIGD2Q96BF3 282 aa9.13□□□□□ -0.95
MSH5-205ENST00000395853 ISOC1Q96CN7 298 aa9.13□□□□□ -0.95
MSH5-205ENST00000395853 TMEM79Q9BSE2 394 aa9.13□□□□□ -0.95
MSH5-205ENST00000395853 PITHD1Q9GZP4 211 aaPredicted RBP9.13□□□□□ -0.95
MSH5-205ENST00000395853 HIPK3Q9H422 1215 aa9.13□□□□□ -0.95
MSH5-205ENST00000395853 MMRN2Q9H8L6 949 aa9.13□□□□□ -0.95
MSH5-205ENST00000395853 TIGARQ9NQ88 270 aa9.13□□□□□ -0.95
MSH5-205ENST00000395853 SLC35C2Q9NQQ7 365 aa9.13□□□□□ -0.95
MSH5-205ENST00000395853 ARL8BQ9NVJ2 186 aa9.13□□□□□ -0.95
MSH5-205ENST00000395853 DNAJC17Q9NVM6 304 aaKnown RBP9.13□□□□□ -0.95
MSH5-205ENST00000395853 BARHL2Q9NY43 387 aa9.13□□□□□ -0.95
MSH5-205ENST00000395853 FBXO40Q9UH90 709 aa9.13□□□□□ -0.95
MSH5-205ENST00000395853 CCL15-CCL14A0A0B4J2E2 113 aa9.13□□□□□ -0.95
MSH5-205ENST00000395853 A0A1W2PPC1 479 aa9.13□□□□□ -0.95
MSH5-205ENST00000395853 CLRN2A0PK11 232 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms