RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 UBDO15205 165 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 UBOX5O94941 541 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 ACADSP16219 412 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 ZNF24P17028 368 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 TYMPP19971 482 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 CUL2Q13617 745 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 KPNB1Q14974 876 aaKnown RBP12.51□□□□□ -0.41
SIN3A-202ENST00000394947 TPCN2Q8NHX9 752 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 GRIN3AQ8TCU5 1115 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 PYDC1Q8WXC3 89 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 BPIFA1Q9NP55 256 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 PLXNC1O60486 1568 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 KDM5DQ9BY66 1539 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 ZNF608Q9ULD9 1512 aaPredicted RBP12.51□□□□□ -0.41
SIN3A-202ENST00000394947 MAST1Q9Y2H9 1570 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 BCLAF3A2AJT9 711 aaKnown RBP12.51□□□□□ -0.41
SIN3A-202ENST00000394947 BUD23O43709 281 aaKnown RBP12.51□□□□□ -0.41
SIN3A-202ENST00000394947 NDUFB10O96000 172 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 FAM58BPP0C7Q3 252 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 PRG2P13727 222 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 FDFT1P37268 417 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 ITGA9Q13797 1035 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 EZH2Q15910 746 aaKnown RBP12.51□□□□□ -0.41
SIN3A-202ENST00000394947 HIPK1Q86Z02 1210 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 MRPS31Q92665 395 aaKnown RBP12.51□□□□□ -0.41
SIN3A-202ENST00000394947 APBA2Q99767 749 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 OSBPL3Q9H4L5 887 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 KLHL28Q9NXS3 571 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 PHF11Q9UIL8 331 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 VANGL2Q9ULK5 521 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 AAR2Q9Y312 384 aaKnown RBP12.51□□□□□ -0.41
SIN3A-202ENST00000394947 A0A1W2PQC6 194 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 HIST1H2ABP04908 130 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 CYP4B1P13584 511 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 PRKAA1Q13131 559 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 KLHL12Q53G59 568 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 HIST3H2AQ7L7L0 130 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 HIST1H2ACQ93077 130 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 NIF3L1Q9GZT8 377 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 ISCUQ9H1K1 167 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 ZDHHC6Q9H6R6 413 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 WDR41Q9HAD4 459 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 COMMD9Q9P000 198 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 USP18Q9UMW8 372 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 BTBD3Q9Y2F9 522 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 PDS5AQ29RF7 1337 aaKnown RBP12.51□□□□□ -0.41
SIN3A-202ENST00000394947 TRDMT1O14717 391 aaKnown RBP12.51□□□□□ -0.41
SIN3A-202ENST00000394947 CPA3P15088 417 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 ITGALP20701 1170 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 MGAT1P26572 445 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 IDH2P48735 452 aaKnown RBP12.51□□□□□ -0.41
SIN3A-202ENST00000394947 R3HDM1Q15032 1099 aaKnown RBP12.51□□□□□ -0.41
SIN3A-202ENST00000394947 KBTBD12Q3ZCT8 623 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 N4BP2L1Q5TBK1 243 aaPredicted RBP12.51□□□□□ -0.41
SIN3A-202ENST00000394947 IQSEC1Q6DN90 963 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 SMYD1Q8NB12 490 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 ATP6V1C2Q8NEY4 427 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 FEM1CQ96JP0 617 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 QKIQ96PU8 341 aaKnown RBP eCLIP12.51□□□□□ -0.41
SIN3A-202ENST00000394947 TUBGCP4Q9UGJ1 667 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 PAX7P23759 505 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 FASP25445 335 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 RPL4P36578 427 aaKnown RBP12.51□□□□□ -0.41
SIN3A-202ENST00000394947 EIF2S3P41091 472 aaKnown RBP12.51□□□□□ -0.41
SIN3A-202ENST00000394947 PMF1Q6P1K2 205 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 SCIMPQ6UWF3 145 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 PACS1Q6VY07 963 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 ILDR2Q71H61 639 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 GLT6D1Q7Z4J2 308 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 CENPIQ92674 756 aaPredicted RBP12.51□□□□□ -0.41
SIN3A-202ENST00000394947 TRMT13Q9NUP7 481 aaKnown RBP12.51□□□□□ -0.41
SIN3A-202ENST00000394947 DNAJC5BQ9UF47 199 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 ABCA10Q8WWZ4 1543 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 PTPN5P54829 565 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 IL27RAQ6UWB1 636 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 RXFP2Q8WXD0 754 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 ELMO1Q92556 727 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 RORBQ92753 470 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 CAB39LQ9H9S4 337 aa12.51□□□□□ -0.41
SIN3A-202ENST00000394947 SEMA4BQ9NPR2 832 aaPredicted RBP12.51□□□□□ -0.41
SIN3A-202ENST00000394947 MED26O95402 600 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 ATP6V1G2O95670 118 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 GYPCP04921 128 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 RCVRNP35243 200 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 CPT1AP50416 773 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 CARTPTQ16568 116 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 STRIP1Q5VSL9 837 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 WDR93Q6P2C0 686 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 KRT74Q7RTS7 529 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 C2orf73Q8N5S3 287 aaPredicted RBP12.5□□□□□ -0.41
SIN3A-202ENST00000394947 SETD6Q8TBK2 473 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 GAL3ST3Q96A11 431 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 ZNF354BQ96LW1 612 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 ALKBH4Q9NXW9 302 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 PCDHB2Q9Y5E7 798 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 KPNA6O60684 536 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 KCNH1O95259 989 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 NR3C2P08235 984 aa12.5□□□□□ -0.41
SIN3A-202ENST00000394947 DBTP11182 482 aaKnown RBP12.5□□□□□ -0.41
SIN3A-202ENST00000394947 FNBP1LQ5T0N5 605 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms