RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 SH3YL1Q96HL8 342 aaPredicted RBP12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 NLRP4Q96MN2 994 aa12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 TARS2Q9BW92 718 aaKnown RBP12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 SEZ6LQ9BYH1 1024 aa12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 PCDHA12Q9UN75 941 aa12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 APOBEC2Q9Y235 224 aaKnown RBP12.87□□□□□ -0.35
SLC28A1-203ENST00000394573 A8MV72 311 aaPredicted RBP12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 C8BP07358 591 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 ADSSP30520 456 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 SERPINB5P36952 375 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 CBWD6Q4V339 395 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 CBWD3Q5JTY5 395 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 CBWD5Q5RIA9 395 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 FAM205BPQ63HN1 556 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 SLFN13Q68D06 897 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 FRMD5Q7Z6J6 570 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 NEK8Q86SG6 692 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 GATAD2AQ86YP4 633 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 CCDC28AQ8IWP9 274 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 ZFP90Q8TF47 636 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 ATL1Q8WXF7 558 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 NARFLQ9H6Q4 476 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 SSU72Q9NP77 194 aaKnown RBP12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 ITM2CQ9NQX7 267 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 PLSCR3Q9NRY6 295 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 PCDHA2Q9Y5H9 948 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 SNX13Q9Y5W8 968 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 A0A0B4J269 797 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 F5H6K3 240 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 CALCAP01258 141 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 KRT3P12035 628 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 KLRC2P26717 231 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 SLC26A2P50443 739 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 TUBB3Q13509 450 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 IQSEC1Q6DN90 963 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 SYDE1Q6ZW31 735 aaPredicted RBP12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 KCTD1Q719H9 257 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 RHPN2Q8IUC4 686 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 OFCC1Q8IZS5 231 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 HM13Q8TCT9 377 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 GIMAP1Q8WWP7 306 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 PPP1R36Q96LQ0 422 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 ZNF778Q96MU6 729 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 CLPBQ9H078 707 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 BMP2KQ9NSY1 1161 aaPredicted RBP12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 ARHGEF35A5YM69 484 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 DNALI1O14645 258 aaPredicted RBP12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 CLASP2O75122 1294 aaKnown RBP12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 ALOX5P09917 674 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 BMP3P12645 472 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 CD58P19256 250 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 QARSP47897 775 aaKnown RBP12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 NAPAP54920 295 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 BBS9Q3SYG4 887 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 BOLA3Q53S33 107 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 ZFYVE27Q5T4F4 411 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 PDPK2PQ6A1A2 396 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 TUBA3EQ6PEY2 450 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 PLEKHG7Q6ZR37 379 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 LSMEM2Q8N112 164 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 BBOF1Q8ND07 529 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 SNX19Q92543 992 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 DACT3Q96B18 629 aaPredicted RBP12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 DMRTB1Q96MA1 342 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 C7orf26Q96N11 449 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 ATP13A3Q9H7F0 1226 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 MOV10Q9HCE1 1003 aaKnown RBP12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 SEPT3Q9UH03 358 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 NUDT5Q9UKK9 219 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 ITGA11Q9UKX5 1188 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 DNPEPQ9ULA0 475 aa12.86□□□□□ -0.35
SLC28A1-203ENST00000394573 ATP8B3O60423 1300 aa12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 PI4K2BG5E9Z4 385 aa12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 ZNF701M0R085 212 aaPredicted RBP12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 ALDH1A2O94788 518 aa12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 FKBP9O95302 570 aa12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 SLC5A1P13866 664 aa12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 BMPR2Q13873 1038 aa12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 TRIM71Q2Q1W2 868 aaKnown RBP12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 FNBP1LQ5T0N5 605 aa12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 HERC6Q8IVU3 1022 aa12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 RDH13Q8NBN7 331 aa12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 FBXO36Q8NEA4 188 aa12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 ADAM32Q8TC27 787 aa12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 ELMO3Q96BJ8 720 aa12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 NACC1Q96RE7 527 aa12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 ZNF347Q96SE7 839 aa12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 VAT1LQ9HCJ6 419 aa12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 STK39Q9UEW8 545 aa12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 KIAA1024Q9UPX6 916 aa12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 PCDHGA7Q9Y5G6 932 aa12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 AKAP11Q9UKA4 1901 aa12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 HTRA2O43464 458 aaPredicted RBP12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 ARHGEF15O94989 841 aa12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 NR3C1P04150 777 aa12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 FDX1P10109 184 aa12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 COX4I1P13073 169 aa12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 ENO3P13929 434 aaPredicted RBP12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 GRIA1P42261 906 aa12.85□□□□□ -0.35
SLC28A1-203ENST00000394573 STX1BP61266 288 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms