RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 SMIM11AP58511 58 aa13.71□□□□□ -0.21
USP49-203ENST00000394253 INTS11Q5TA45 600 aaKnown RBP13.71□□□□□ -0.21
USP49-203ENST00000394253 GATAD2BQ8WXI9 593 aa13.71□□□□□ -0.21
USP49-203ENST00000394253 ZNF804BA4D1E1 1349 aa13.71□□□□□ -0.21
USP49-203ENST00000394253 SDC2P34741 201 aa13.71□□□□□ -0.21
USP49-203ENST00000394253 CKAP2Q8WWK9 683 aa13.71□□□□□ -0.21
USP49-203ENST00000394253 SKIV2L2P42285 1042 aaKnown RBP13.71□□□□□ -0.22
USP49-203ENST00000394253 RAB43Q86YS6 212 aa13.71□□□□□ -0.22
USP49-203ENST00000394253 SAR1AQ9NR31 198 aa13.71□□□□□ -0.22
USP49-203ENST00000394253 GPRC5DQ9NZD1 345 aa13.71□□□□□ -0.22
USP49-203ENST00000394253 REM1O75628 298 aa13.71□□□□□ -0.22
USP49-203ENST00000394253 SERPINF2P08697 491 aa13.71□□□□□ -0.22
USP49-203ENST00000394253 EIF2AK2P19525 551 aaKnown RBP13.71□□□□□ -0.22
USP49-203ENST00000394253 GALNT18Q6P9A2 607 aa13.71□□□□□ -0.22
USP49-203ENST00000394253 RBM43Q6ZSC3 357 aaKnown RBP13.71□□□□□ -0.22
USP49-203ENST00000394253 BLOC1S5Q8TDH9 187 aa13.71□□□□□ -0.22
USP49-203ENST00000394253 ASB2Q96Q27 587 aa13.71□□□□□ -0.22
USP49-203ENST00000394253 ADGRE3Q9BY15 652 aa13.71□□□□□ -0.22
USP49-203ENST00000394253 LIMD1Q9UGP4 676 aa13.71□□□□□ -0.22
USP49-203ENST00000394253 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.71□□□□□ -0.22
USP49-203ENST00000394253 CHURC1-FNTBB4DL54 471 aa13.71□□□□□ -0.22
USP49-203ENST00000394253 ITGA2P17301 1181 aa13.71□□□□□ -0.22
USP49-203ENST00000394253 SEC24CP53992 1094 aa13.71□□□□□ -0.22
USP49-203ENST00000394253 TTLL4Q14679 1199 aa13.71□□□□□ -0.22
USP49-203ENST00000394253 RIPOR1Q6ZS17 1223 aa13.71□□□□□ -0.22
USP49-203ENST00000394253 SSH3Q8TE77 659 aa13.71□□□□□ -0.22
USP49-203ENST00000394253 GGA2Q9UJY4 613 aa13.71□□□□□ -0.22
USP49-203ENST00000394253 SYNMO15061 1565 aa13.7□□□□□ -0.22
USP49-203ENST00000394253 ASS1P00966 412 aaKnown RBP13.7□□□□□ -0.22
USP49-203ENST00000394253 ZNF302Q9NR11 478 aa13.7□□□□□ -0.22
USP49-203ENST00000394253 INTS10Q9NVR2 710 aaKnown RBP13.7□□□□□ -0.22
USP49-203ENST00000394253 MRPS7Q9Y2R9 242 aaKnown RBP13.7□□□□□ -0.22
USP49-203ENST00000394253 A0A087WWV3 80 aa13.7□□□□□ -0.22
USP49-203ENST00000394253 RAD51CO43502 376 aa13.7□□□□□ -0.22
USP49-203ENST00000394253 UMPSP11172 480 aa13.7□□□□□ -0.22
USP49-203ENST00000394253 ME2P23368 584 aa13.7□□□□□ -0.22
USP49-203ENST00000394253 UGT1A5P35504 534 aa13.7□□□□□ -0.22
USP49-203ENST00000394253 EIF5AL1Q6IS14 154 aaKnown RBP13.7□□□□□ -0.22
USP49-203ENST00000394253 R3HCC1LQ7Z5L2 792 aaKnown RBP13.7□□□□□ -0.22
USP49-203ENST00000394253 PGBD3Q8N328 593 aa13.7□□□□□ -0.22
USP49-203ENST00000394253 PPP1R16BQ96T49 567 aa13.7□□□□□ -0.22
USP49-203ENST00000394253 SPATA5L1Q9BVQ7 753 aa13.7□□□□□ -0.22
USP49-203ENST00000394253 CCNB1IP1Q9NPC3 277 aa13.7□□□□□ -0.22
USP49-203ENST00000394253 KCND2Q9NZV8 630 aa13.7□□□□□ -0.22
USP49-203ENST00000394253 A0A088AWK7 358 aa13.7□□□□□ -0.22
USP49-203ENST00000394253 ZNF10P21506 573 aaPredicted RBP13.7□□□□□ -0.22
USP49-203ENST00000394253 KCNB1Q14721 858 aa13.7□□□□□ -0.22
USP49-203ENST00000394253 USP7Q93009 1102 aa13.7□□□□□ -0.22
USP49-203ENST00000394253 RMDN3Q96TC7 470 aa13.7□□□□□ -0.22
USP49-203ENST00000394253 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.7□□□□□ -0.22
USP49-203ENST00000394253 ZNF37AP17032 561 aaPredicted RBP13.7□□□□□ -0.22
USP49-203ENST00000394253 ARFIP1P53367 373 aa13.7□□□□□ -0.22
USP49-203ENST00000394253 FAM20CQ8IXL6 584 aa13.7□□□□□ -0.22
USP49-203ENST00000394253 OR8H1Q8NGG4 311 aa13.7□□□□□ -0.22
USP49-203ENST00000394253 PNPLA3Q9NST1 481 aa13.7□□□□□ -0.22
USP49-203ENST00000394253 DHRS7Q9Y394 339 aa13.7□□□□□ -0.22
USP49-203ENST00000394253 IFNA7P01567 189 aa13.7□□□□□ -0.22
USP49-203ENST00000394253 NPY2RP49146 381 aa13.7□□□□□ -0.22
USP49-203ENST00000394253 NAB2Q15742 525 aa13.7□□□□□ -0.22
USP49-203ENST00000394253 PHACTR4Q8IZ21 702 aa13.7□□□□□ -0.22
USP49-203ENST00000394253 DCLK3Q9C098 648 aa13.7□□□□□ -0.22
USP49-203ENST00000394253 SLC38A7Q9NVC3 462 aa13.7□□□□□ -0.22
USP49-203ENST00000394253 E2F8A0AVK6 867 aa13.7□□□□□ -0.22
USP49-203ENST00000394253 IREB2P48200 963 aaKnown RBP13.7□□□□□ -0.22
USP49-203ENST00000394253 SCNN1DP51172 638 aa13.7□□□□□ -0.22
USP49-203ENST00000394253 RCAN1P53805 252 aa13.7□□□□□ -0.22
USP49-203ENST00000394253 SIPA1Q96FS4 1042 aa13.7□□□□□ -0.22
USP49-203ENST00000394253 SAE1Q9UBE0 346 aaPredicted RBP13.7□□□□□ -0.22
USP49-203ENST00000394253 PDHBP11177 359 aa13.7□□□□□ -0.22
USP49-203ENST00000394253 BCAMP50895 628 aa13.7□□□□□ -0.22
USP49-203ENST00000394253 PERM1Q5SV97 790 aa13.7□□□□□ -0.22
USP49-203ENST00000394253 USP38Q8NB14 1042 aa13.7□□□□□ -0.22
USP49-203ENST00000394253 POLR3FQ9H1D9 316 aaPredicted RBP13.7□□□□□ -0.22
USP49-203ENST00000394253 SP140LQ9H930 580 aa13.7□□□□□ -0.22
USP49-203ENST00000394253 CLRN2A0PK11 232 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 CRTAMO95727 393 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 UBA1P22314 1058 aaKnown RBP13.69□□□□□ -0.22
USP49-203ENST00000394253 CDC25AP30304 524 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 GPR15P49685 360 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 NFX1Q12986 1120 aaKnown RBP13.69□□□□□ -0.22
USP49-203ENST00000394253 FASTKQ14296 549 aaKnown RBP13.69□□□□□ -0.22
USP49-203ENST00000394253 STK32AQ8WU08 396 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 PIGSQ96S52 555 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 TMEM216Q9P0N5 145 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 FSHRP23945 695 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 MAPK7Q13164 816 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 RHEBQ15382 184 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 TBCDQ9BTW9 1192 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 SH3BP1Q9Y3L3 701 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 REREQ9P2R6 1566 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 TFECO14948 347 aaPredicted RBP13.69□□□□□ -0.22
USP49-203ENST00000394253 NUDT14O95848 222 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 PRKAA1Q13131 559 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 IP6K1Q92551 441 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 FAM240BA0A1B0GVZ2 78 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 PLK4O00444 970 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 ABLIM1O14639 778 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 PLA2G6O60733 806 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 PDGFRAP16234 1089 aa13.69□□□□□ -0.22
USP49-203ENST00000394253 PLD1Q13393 1074 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms