RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 H7C4K7 107 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 GAS2O43903 313 aaKnown RBP9.35□□□□□ -0.91
CDH11-202ENST00000394156 CTNNB1P35222 781 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 SLC6A3Q01959 620 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 TTC39CQ8N584 583 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 TMCO5AQ8N6Q1 288 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 ATP13A1Q9HD20 1204 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 MAFO75444 373 aaPredicted RBP9.35□□□□□ -0.91
CDH11-202ENST00000394156 H2AFXP16104 143 aaPredicted RBP9.35□□□□□ -0.91
CDH11-202ENST00000394156 ITGA9Q13797 1035 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 PLCL1Q15111 1095 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 PRCCQ92733 491 aaPredicted RBP9.35□□□□□ -0.91
CDH11-202ENST00000394156 INPP5DQ92835 1189 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 ZFYVE19Q96K21 471 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 ZNF518BQ9C0D4 1074 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 VCX3AQ9NNX9 186 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 ITGB4P16144 1822 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 NAV1Q8NEY1 1877 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 GPR25O00155 361 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 PIK3CDO00329 1044 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 HSPA8P11142 646 aaKnown RBP9.35□□□□□ -0.91
CDH11-202ENST00000394156 N4BP2L1Q5TBK1 243 aaPredicted RBP9.35□□□□□ -0.91
CDH11-202ENST00000394156 IQSEC1Q6DN90 963 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 RFWD3Q6PCD5 774 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 MILR1Q7Z6M3 343 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 TNS4Q8IZW8 715 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 CLEC4FQ8N1N0 589 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 PABPC3Q9H361 631 aaKnown RBP9.35□□□□□ -0.91
CDH11-202ENST00000394156 TMEM161AQ9NX61 479 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 NINJ2Q9NZG7 142 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 REXO2Q9Y3B8 237 aaKnown RBP9.35□□□□□ -0.91
CDH11-202ENST00000394156 CNTNAP1P78357 1384 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 SRCAPQ6ZRS2 3230 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 MYH4Q9Y623 1939 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 A0A1W2PQH9 124 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 CYP3A4P08684 503 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 KDELR1P24390 212 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 EEF1DP29692 281 aaKnown RBP9.35□□□□□ -0.91
CDH11-202ENST00000394156 YWHAZP63104 245 aaKnown RBP9.35□□□□□ -0.91
CDH11-202ENST00000394156 TRMT11Q7Z4G4 463 aaKnown RBP9.35□□□□□ -0.91
CDH11-202ENST00000394156 SIX5Q8N196 739 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 ACTRT1Q8TDG2 376 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 BAP1Q92560 729 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 SNRNP25Q9BV90 132 aaKnown RBP9.35□□□□□ -0.91
CDH11-202ENST00000394156 CARD9Q9H257 536 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 GPAMQ9HCL2 828 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 CD84Q9UIB8 345 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 MID2Q9UJV3 735 aa9.35□□□□□ -0.91
CDH11-202ENST00000394156 CYP3A7-CYP3A51PA0A087WV96 503 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 TPP1O14773 563 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 ATP6V1B1P15313 513 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 CYP3A7P24462 503 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 TTMPQ5BVD1 217 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 ABHD15Q6UXT9 468 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 TRIM48Q8IWZ4 208 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 FBXL16Q8N461 479 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 SHISA4Q96DD7 197 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 NR1H4Q96RI1 486 aaPredicted RBP9.34□□□□□ -0.91
CDH11-202ENST00000394156 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.34□□□□□ -0.91
CDH11-202ENST00000394156 OR12D3Q9UGF7 316 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 PCDHA3Q9Y5H8 950 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 LAMA4Q16363 1823 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 ARIH2O95376 493 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 ASGR1P07306 291 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 RARGP13631 454 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 NAPEPLDQ6IQ20 393 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 HTR3CQ8WXA8 447 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 NDE1Q9NXR1 346 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 A0A0A6YYK5 440 aaPredicted RBP9.34□□□□□ -0.91
CDH11-202ENST00000394156 HEATR9A2RTY3 570 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 KPNA3O00505 521 aaPredicted RBP9.34□□□□□ -0.91
CDH11-202ENST00000394156 MSX2P35548 267 aaPredicted RBP9.34□□□□□ -0.91
CDH11-202ENST00000394156 GATMP50440 423 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 MAPK10P53779 464 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 SNRPFP62306 86 aaKnown RBP9.34□□□□□ -0.91
CDH11-202ENST00000394156 BOLA3Q53S33 107 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 ZNF470Q6ECI4 717 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 TMCO2Q7Z6W1 182 aaPredicted RBP9.34□□□□□ -0.91
CDH11-202ENST00000394156 SRLQ86TD4 932 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 KCNMB4Q86W47 210 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 LZICQ8WZA0 190 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 FEM1CQ96JP0 617 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 SERAC1Q96JX3 654 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 KCNK16Q96T55 309 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 HSD17B14Q9BPX1 270 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 NFASCO94856 1347 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 NRCAMQ92823 1304 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 NKRFO15226 690 aaKnown RBP eCLIP9.34□□□□□ -0.91
CDH11-202ENST00000394156 STRNO43815 780 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 TRUB2O95900 331 aaKnown RBP9.34□□□□□ -0.91
CDH11-202ENST00000394156 ARL4DP49703 201 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 CNGA3Q16281 694 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 PSMD5Q16401 504 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 PPM1LQ5SGD2 360 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 SDE2Q6IQ49 451 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.34□□□□□ -0.91
CDH11-202ENST00000394156 UNC45BQ8IWX7 931 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 ELOA2Q8IYF1 753 aaPredicted RBP9.34□□□□□ -0.91
CDH11-202ENST00000394156 FOPNLQ96NB1 174 aa9.34□□□□□ -0.91
CDH11-202ENST00000394156 THUMPD3Q9BV44 507 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms