RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 TIMM44O43615 452 aa16.05■□□□□ 0.16
CHMP3-202ENST00000393773 PCDHGA12O60330 932 aa16.05■□□□□ 0.16
CHMP3-202ENST00000393773 TSPAN3O60637 253 aa16.05■□□□□ 0.16
CHMP3-202ENST00000393773 SEMA4FO95754 770 aa16.05■□□□□ 0.16
CHMP3-202ENST00000393773 ZBED1O96006 694 aa16.05■□□□□ 0.16
CHMP3-202ENST00000393773 ZSCAN22P10073 491 aaPredicted RBP16.05■□□□□ 0.16
CHMP3-202ENST00000393773 SGSHP51688 502 aa16.05■□□□□ 0.16
CHMP3-202ENST00000393773 TKTL1P51854 596 aa16.05■□□□□ 0.16
CHMP3-202ENST00000393773 MCCD1P59942 119 aaPredicted RBP16.05■□□□□ 0.16
CHMP3-202ENST00000393773 SMAD1Q15797 465 aaKnown RBP16.05■□□□□ 0.16
CHMP3-202ENST00000393773 MPPE1Q53F39 396 aa16.05■□□□□ 0.16
CHMP3-202ENST00000393773 KCNT1Q5JUK3 1230 aa16.05■□□□□ 0.16
CHMP3-202ENST00000393773 PM20D1Q6GTS8 502 aa16.05■□□□□ 0.16
CHMP3-202ENST00000393773 FMNL3Q8IVF7 1028 aa16.05■□□□□ 0.16
CHMP3-202ENST00000393773 CRELD1Q96HD1 420 aa16.05■□□□□ 0.16
CHMP3-202ENST00000393773 TMEM176AQ96HP8 235 aa16.05■□□□□ 0.16
CHMP3-202ENST00000393773 LRIG1Q96JA1 1093 aa16.05■□□□□ 0.16
CHMP3-202ENST00000393773 HEXIM2Q96MH2 286 aaKnown RBP16.05■□□□□ 0.16
CHMP3-202ENST00000393773 FBRSQ9HAH7 460 aa16.05■□□□□ 0.16
CHMP3-202ENST00000393773 PRSS16Q9NQE7 514 aa16.05■□□□□ 0.16
CHMP3-202ENST00000393773 CISHQ9NSE2 258 aa16.05■□□□□ 0.16
CHMP3-202ENST00000393773 GGA2Q9UJY4 613 aa16.05■□□□□ 0.16
CHMP3-202ENST00000393773 PTPRQQ9UMZ3 2332 aa16.04■□□□□ 0.16
CHMP3-202ENST00000393773 A0A087WV48 116 aa16.04■□□□□ 0.16
CHMP3-202ENST00000393773 FAM149AA5PLN7 773 aa16.04■□□□□ 0.16
CHMP3-202ENST00000393773 TRABD2BA6NFA1 517 aa16.04■□□□□ 0.16
CHMP3-202ENST00000393773 H0Y8X5 98 aa16.04■□□□□ 0.16
CHMP3-202ENST00000393773 PAPSS1O43252 624 aaPredicted RBP16.04■□□□□ 0.16
CHMP3-202ENST00000393773 MYL1P05976 194 aa16.04■□□□□ 0.16
CHMP3-202ENST00000393773 PRR29P0C7W0 189 aa16.04■□□□□ 0.16
CHMP3-202ENST00000393773 PFKFB1P16118 471 aa16.04■□□□□ 0.16
CHMP3-202ENST00000393773 CD27P26842 260 aa16.04■□□□□ 0.16
CHMP3-202ENST00000393773 CTSKP43235 329 aa16.04■□□□□ 0.16
CHMP3-202ENST00000393773 ZNF445P59923 1031 aa16.04■□□□□ 0.16
CHMP3-202ENST00000393773 RPS14P62263 151 aaKnown RBP16.04■□□□□ 0.16
CHMP3-202ENST00000393773 ARID5AQ03989 594 aa16.04■□□□□ 0.16
CHMP3-202ENST00000393773 CYP4F3Q08477 520 aa16.04■□□□□ 0.16
CHMP3-202ENST00000393773 TEAD4Q15561 434 aa16.04■□□□□ 0.16
CHMP3-202ENST00000393773 ZCWPW2Q504Y3 356 aa16.04■□□□□ 0.16
CHMP3-202ENST00000393773 KRT39Q6A163 491 aa16.04■□□□□ 0.16
CHMP3-202ENST00000393773 CHST9Q7L1S5 443 aa16.04■□□□□ 0.16
CHMP3-202ENST00000393773 SCUBE3Q8IX30 993 aa16.04■□□□□ 0.16
CHMP3-202ENST00000393773 AHI1Q8N157 1196 aa16.04■□□□□ 0.16
CHMP3-202ENST00000393773 ANKRD52Q8NB46 1076 aa16.04■□□□□ 0.16
CHMP3-202ENST00000393773 WFDC5Q8TCV5 224 aa16.04■□□□□ 0.16
CHMP3-202ENST00000393773 NDRG1Q92597 394 aaKnown RBP16.04■□□□□ 0.16
CHMP3-202ENST00000393773 FAXDC2Q96IV6 333 aa16.04■□□□□ 0.16
CHMP3-202ENST00000393773 DNAI2Q9GZS0 605 aa16.04■□□□□ 0.16
CHMP3-202ENST00000393773 OLA1Q9NTK5 396 aaKnown RBP16.04■□□□□ 0.16
CHMP3-202ENST00000393773 ABCB8Q9NUT2 735 aa16.04■□□□□ 0.16
CHMP3-202ENST00000393773 HPSEQ9Y251 543 aa16.04■□□□□ 0.16
CHMP3-202ENST00000393773 HBS1LQ9Y450 684 aaKnown RBP16.04■□□□□ 0.16
CHMP3-202ENST00000393773 ATMQ13315 3056 aa16.03■□□□□ 0.16
CHMP3-202ENST00000393773 MSI1O43347 362 aaKnown RBP16.03■□□□□ 0.16
CHMP3-202ENST00000393773 RHOBTB3O94955 611 aa16.03■□□□□ 0.16
CHMP3-202ENST00000393773 LATS1O95835 1130 aa16.03■□□□□ 0.16
CHMP3-202ENST00000393773 IGHV4-34P06331 123 aa16.03■□□□□ 0.16
CHMP3-202ENST00000393773 PABPC1P11940 636 aaKnown RBP16.03■□□□□ 0.16
CHMP3-202ENST00000393773 KRT13P13646 458 aa16.03■□□□□ 0.16
CHMP3-202ENST00000393773 MXI1P50539 228 aa16.03■□□□□ 0.16
CHMP3-202ENST00000393773 ZBTB16Q05516 673 aa16.03■□□□□ 0.16
CHMP3-202ENST00000393773 ADIGQ0VDE8 80 aa16.03■□□□□ 0.16
CHMP3-202ENST00000393773 PKP1Q13835 747 aa16.03■□□□□ 0.16
CHMP3-202ENST00000393773 SUZ12Q15022 739 aaKnown RBP16.03■□□□□ 0.16
CHMP3-202ENST00000393773 GOLGA7BQ2TAP0 167 aa16.03■□□□□ 0.16
CHMP3-202ENST00000393773 TTC39CQ8N584 583 aa16.03■□□□□ 0.16
CHMP3-202ENST00000393773 CCDC150Q8NCX0 1101 aa16.03■□□□□ 0.16
CHMP3-202ENST00000393773 BTBD1Q9H0C5 482 aa16.03■□□□□ 0.16
CHMP3-202ENST00000393773 SFMBT1Q9UHJ3 866 aa16.03■□□□□ 0.16
CHMP3-202ENST00000393773 KNTC1P50748 2209 aa16.03■□□□□ 0.16
CHMP3-202ENST00000393773 TENM4Q6N022 2769 aa16.03■□□□□ 0.16
CHMP3-202ENST00000393773 ARID1BQ8NFD5 2236 aaPredicted RBP16.02■□□□□ 0.16
CHMP3-202ENST00000393773 A0A1B0GVL5 298 aa16.02■□□□□ 0.16
CHMP3-202ENST00000393773 KCNK3O14649 394 aa16.02■□□□□ 0.16
CHMP3-202ENST00000393773 XPO1O14980 1071 aaKnown RBP16.02■□□□□ 0.16
CHMP3-202ENST00000393773 FSBPO95073 299 aa16.02■□□□□ 0.16
CHMP3-202ENST00000393773 DNTTP04053 509 aa16.02■□□□□ 0.16
CHMP3-202ENST00000393773 DLDP09622 509 aaKnown RBP16.02■□□□□ 0.16
CHMP3-202ENST00000393773 GTF2H1P32780 548 aa16.02■□□□□ 0.16
CHMP3-202ENST00000393773 PSMC2P35998 433 aaKnown RBP16.02■□□□□ 0.16
CHMP3-202ENST00000393773 HARS2P49590 506 aaKnown RBP16.02■□□□□ 0.16
CHMP3-202ENST00000393773 BCAT1P54687 386 aa16.02■□□□□ 0.16
CHMP3-202ENST00000393773 IL9RQ01113 521 aa16.02■□□□□ 0.16
CHMP3-202ENST00000393773 DNM1Q05193 864 aaKnown RBP16.02■□□□□ 0.16
CHMP3-202ENST00000393773 TTC31Q49AM3 519 aaPredicted RBP16.02■□□□□ 0.16
CHMP3-202ENST00000393773 ADGRF1Q5T601 910 aa16.02■□□□□ 0.16
CHMP3-202ENST00000393773 MBLAC2Q68D91 279 aa16.02■□□□□ 0.16
CHMP3-202ENST00000393773 ZNF776Q68DI1 518 aaPredicted RBP16.02■□□□□ 0.16
CHMP3-202ENST00000393773 ATL3Q6DD88 541 aa16.02■□□□□ 0.16
CHMP3-202ENST00000393773 DHRS13Q6UX07 377 aa16.02■□□□□ 0.16
CHMP3-202ENST00000393773 TATDN2Q93075 761 aa16.02■□□□□ 0.16
CHMP3-202ENST00000393773 MYO19Q96H55 970 aa16.02■□□□□ 0.16
CHMP3-202ENST00000393773 SGK2Q9HBY8 427 aa16.02■□□□□ 0.16
CHMP3-202ENST00000393773 RCOR1Q9UKL0 485 aa16.02■□□□□ 0.16
CHMP3-202ENST00000393773 TSPAN16Q9UKR8 245 aa16.02■□□□□ 0.16
CHMP3-202ENST00000393773 PLA2G4CQ9UP65 541 aa16.02■□□□□ 0.16
CHMP3-202ENST00000393773 MAPK8IP1Q9UQF2 711 aa16.02■□□□□ 0.16
CHMP3-202ENST00000393773 DOCK9Q9BZ29 2069 aa16.02■□□□□ 0.15
CHMP3-202ENST00000393773 ASXL3Q9C0F0 2248 aa16.02■□□□□ 0.15
CHMP3-202ENST00000393773 YJEFN3A6XGL0 299 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms