RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 SOWAHAQ2M3V2 549 aa19.41■□□□□ 0.7
CBX1-202ENST00000393408 CASC4Q6P4E1 433 aa19.41■□□□□ 0.7
CBX1-202ENST00000393408 LRRC8BQ6P9F7 803 aa19.41■□□□□ 0.7
CBX1-202ENST00000393408 NLRP7Q8WX94 980 aa19.41■□□□□ 0.7
CBX1-202ENST00000393408 GATA6Q92908 595 aa19.41■□□□□ 0.7
CBX1-202ENST00000393408 DDX43Q9NXZ2 648 aaKnown RBP19.41■□□□□ 0.7
CBX1-202ENST00000393408 SOX13Q9UN79 622 aa19.41■□□□□ 0.7
CBX1-202ENST00000393408 MEI4A8MW99 385 aa19.4■□□□□ 0.7
CBX1-202ENST00000393408 HACD1B0YJ81 288 aa19.4■□□□□ 0.7
CBX1-202ENST00000393408 F5H423 210 aaPredicted RBP19.4■□□□□ 0.7
CBX1-202ENST00000393408 PPP1R12AO14974 1030 aaPredicted RBP19.4■□□□□ 0.7
CBX1-202ENST00000393408 GOT1P17174 413 aa19.4■□□□□ 0.7
CBX1-202ENST00000393408 PCLAFQ15004 111 aa19.4■□□□□ 0.7
CBX1-202ENST00000393408 GJC2Q5T442 439 aaPredicted RBP19.4■□□□□ 0.7
CBX1-202ENST00000393408 C1orf146Q5VVC0 180 aa19.4■□□□□ 0.7
CBX1-202ENST00000393408 IFT43Q96FT9 208 aa19.4■□□□□ 0.7
CBX1-202ENST00000393408 CLMNQ96JQ2 1002 aa19.4■□□□□ 0.7
CBX1-202ENST00000393408 DPEP3Q9H4B8 488 aa19.4■□□□□ 0.7
CBX1-202ENST00000393408 A0A088AWK7 358 aa19.4■□□□□ 0.7
CBX1-202ENST00000393408 ENO4A6NNW6 628 aa19.4■□□□□ 0.7
CBX1-202ENST00000393408 ZBTB7AO95365 584 aa19.4■□□□□ 0.7
CBX1-202ENST00000393408 KCNA4P22459 653 aa19.4■□□□□ 0.7
CBX1-202ENST00000393408 SCNN1AP37088 669 aa19.4■□□□□ 0.7
CBX1-202ENST00000393408 AP2B1P63010 937 aa19.4■□□□□ 0.7
CBX1-202ENST00000393408 DEFB132Q7Z7B7 95 aa19.4■□□□□ 0.7
CBX1-202ENST00000393408 ARNTL2Q8WYA1 636 aa19.4■□□□□ 0.7
CBX1-202ENST00000393408 CDKL2Q92772 493 aa19.4■□□□□ 0.7
CBX1-202ENST00000393408 ZMAT2Q96NC0 199 aaKnown RBP19.4■□□□□ 0.7
CBX1-202ENST00000393408 LGMNQ99538 433 aa19.4■□□□□ 0.7
CBX1-202ENST00000393408 PRKCGP05129 697 aa19.39■□□□□ 0.69
CBX1-202ENST00000393408 MGAT1P26572 445 aa19.39■□□□□ 0.69
CBX1-202ENST00000393408 TMCO4Q5TGY1 634 aa19.39■□□□□ 0.69
CBX1-202ENST00000393408 UNC93AQ86WB7 457 aa19.39■□□□□ 0.69
CBX1-202ENST00000393408 PYROXD2Q8N2H3 581 aa19.39■□□□□ 0.69
CBX1-202ENST00000393408 COLGALT1Q8NBJ5 622 aa19.39■□□□□ 0.69
CBX1-202ENST00000393408 OTUD5Q96G74 571 aa19.39■□□□□ 0.69
CBX1-202ENST00000393408 EIF2B3Q9NR50 452 aaKnown RBP19.39■□□□□ 0.69
CBX1-202ENST00000393408 NDE1Q9NXR1 346 aa19.39■□□□□ 0.69
CBX1-202ENST00000393408 PPP1R1BQ9UD71 204 aaPredicted RBP19.39■□□□□ 0.69
CBX1-202ENST00000393408 DCDC2Q9UHG0 476 aa19.39■□□□□ 0.69
CBX1-202ENST00000393408 PSAT1Q9Y617 370 aa19.39■□□□□ 0.69
CBX1-202ENST00000393408 MAGEA13PA6NCF6 341 aa19.39■□□□□ 0.69
CBX1-202ENST00000393408 SERPINE1P05121 402 aa19.39■□□□□ 0.69
CBX1-202ENST00000393408 PGAM1P18669 254 aa19.39■□□□□ 0.69
CBX1-202ENST00000393408 RPL34P49207 117 aaKnown RBP19.39■□□□□ 0.69
CBX1-202ENST00000393408 ERFP50548 548 aa19.39■□□□□ 0.69
CBX1-202ENST00000393408 BST2Q10589 180 aaKnown RBP19.39■□□□□ 0.69
CBX1-202ENST00000393408 NAB1Q13506 487 aa19.39■□□□□ 0.69
CBX1-202ENST00000393408 MTHFD1LQ6UB35 978 aa19.39■□□□□ 0.69
CBX1-202ENST00000393408 ATG14Q6ZNE5 492 aa19.39■□□□□ 0.69
CBX1-202ENST00000393408 MAVSQ7Z434 540 aa19.39■□□□□ 0.69
CBX1-202ENST00000393408 HACE1Q8IYU2 909 aa19.39■□□□□ 0.69
CBX1-202ENST00000393408 OR6B3Q8NGW1 331 aa19.39■□□□□ 0.69
CBX1-202ENST00000393408 ATP2A3Q93084 1043 aa19.39■□□□□ 0.69
CBX1-202ENST00000393408 ELP3Q9H9T3 547 aa19.39■□□□□ 0.69
CBX1-202ENST00000393408 PPM1HQ9ULR3 514 aa19.39■□□□□ 0.69
CBX1-202ENST00000393408 DERAQ9Y315 318 aa19.39■□□□□ 0.69
CBX1-202ENST00000393408 HCRTO43612 131 aa19.38■□□□□ 0.69
CBX1-202ENST00000393408 KLHL2O95198 593 aa19.38■□□□□ 0.69
CBX1-202ENST00000393408 PROCP04070 461 aa19.38■□□□□ 0.69
CBX1-202ENST00000393408 FESP07332 822 aa19.38■□□□□ 0.69
CBX1-202ENST00000393408 ITGA2BP08514 1039 aa19.38■□□□□ 0.69
CBX1-202ENST00000393408 LCP1P13796 627 aa19.38■□□□□ 0.69
CBX1-202ENST00000393408 SESN2P58004 480 aaPredicted RBP19.38■□□□□ 0.69
CBX1-202ENST00000393408 GSTA3Q16772 222 aa19.38■□□□□ 0.69
CBX1-202ENST00000393408 CCNJLQ8IV13 435 aa19.38■□□□□ 0.69
CBX1-202ENST00000393408 C7orf31Q8N865 590 aa19.38■□□□□ 0.69
CBX1-202ENST00000393408 SORT1Q99523 831 aa19.38■□□□□ 0.69
CBX1-202ENST00000393408 PIH1D1Q9NWS0 290 aaKnown RBP19.38■□□□□ 0.69
CBX1-202ENST00000393408 TUBGCP4Q9UGJ1 667 aa19.38■□□□□ 0.69
CBX1-202ENST00000393408 APOBEC2Q9Y235 224 aaKnown RBP19.38■□□□□ 0.69
CBX1-202ENST00000393408 MFSD11O43934 449 aa19.37■□□□□ 0.69
CBX1-202ENST00000393408 FKBP6O75344 327 aa19.37■□□□□ 0.69
CBX1-202ENST00000393408 CYP2C8P10632 490 aa19.37■□□□□ 0.69
CBX1-202ENST00000393408 CCDC130P13994 396 aa19.37■□□□□ 0.69
CBX1-202ENST00000393408 CACNA2D1P54289 1103 aa19.37■□□□□ 0.69
CBX1-202ENST00000393408 LAMC2Q13753 1193 aa19.37■□□□□ 0.69
CBX1-202ENST00000393408 C10orf107Q8IVU9 208 aa19.37■□□□□ 0.69
CBX1-202ENST00000393408 SLC25A41Q8N5S1 370 aa19.37■□□□□ 0.69
CBX1-202ENST00000393408 ANKRD52Q8NB46 1076 aa19.37■□□□□ 0.69
CBX1-202ENST00000393408 SHKBP1Q8TBC3 707 aa19.37■□□□□ 0.69
CBX1-202ENST00000393408 COL1A2P08123 1366 aa19.37■□□□□ 0.69
CBX1-202ENST00000393408 ZNF638Q14966 1978 aaKnown RBP19.37■□□□□ 0.69
CBX1-202ENST00000393408 RNF103O00237 685 aa19.37■□□□□ 0.69
CBX1-202ENST00000393408 AHCYL1O43865 530 aa19.37■□□□□ 0.69
CBX1-202ENST00000393408 SIN3BO75182 1162 aa19.37■□□□□ 0.69
CBX1-202ENST00000393408 ADORA2BP29275 332 aa19.37■□□□□ 0.69
CBX1-202ENST00000393408 ARL4AP40617 200 aa19.37■□□□□ 0.69
CBX1-202ENST00000393408 BCAT1P54687 386 aa19.37■□□□□ 0.69
CBX1-202ENST00000393408 SLC25A3Q00325 362 aa19.37■□□□□ 0.69
CBX1-202ENST00000393408 HIC1Q14526 733 aa19.37■□□□□ 0.69
CBX1-202ENST00000393408 ZBTB6Q15916 424 aa19.37■□□□□ 0.69
CBX1-202ENST00000393408 RNF220Q5VTB9 566 aa19.37■□□□□ 0.69
CBX1-202ENST00000393408 DPY19L2Q6NUT2 758 aa19.37■□□□□ 0.69
CBX1-202ENST00000393408 IZUMO2Q6UXV1 221 aa19.37■□□□□ 0.69
CBX1-202ENST00000393408 STRADAQ7RTN6 431 aa19.37■□□□□ 0.69
CBX1-202ENST00000393408 LRRC52Q8N7C0 313 aa19.37■□□□□ 0.69
CBX1-202ENST00000393408 PHC3Q8NDX5 983 aa19.37■□□□□ 0.69
CBX1-202ENST00000393408 TSC22D3Q99576 134 aa19.37■□□□□ 0.69
CBX1-202ENST00000393408 TTC1Q99614 292 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms