RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 LYNP07948 512 aa11.17□□□□□ -0.62
BRF1-204ENST00000392557 SLC25A11Q02978 314 aaKnown RBP11.17□□□□□ -0.62
BRF1-204ENST00000392557 MFSD10Q14728 455 aa11.17□□□□□ -0.62
BRF1-204ENST00000392557 FASTKD1Q53R41 847 aaKnown RBP11.17□□□□□ -0.62
BRF1-204ENST00000392557 RALGPS1Q5JS13 557 aa11.17□□□□□ -0.62
BRF1-204ENST00000392557 KCNN1Q92952 543 aa11.17□□□□□ -0.62
BRF1-204ENST00000392557 PANX3Q96QZ0 392 aa11.17□□□□□ -0.62
BRF1-204ENST00000392557 DHX35Q9H5Z1 703 aaKnown RBP11.17□□□□□ -0.62
BRF1-204ENST00000392557 XAB2Q9HCS7 855 aaKnown RBP11.17□□□□□ -0.62
BRF1-204ENST00000392557 KRT82Q9NSB4 513 aa11.17□□□□□ -0.62
BRF1-204ENST00000392557 PDP2Q9P2J9 529 aa11.17□□□□□ -0.62
BRF1-204ENST00000392557 CACNG4Q9UBN1 327 aa11.17□□□□□ -0.62
BRF1-204ENST00000392557 BARX2Q9UMQ3 279 aaPredicted RBP11.17□□□□□ -0.62
BRF1-204ENST00000392557 PLLPQ9Y342 182 aa11.17□□□□□ -0.62
BRF1-204ENST00000392557 TNPO2O14787 897 aaKnown RBP11.17□□□□□ -0.62
BRF1-204ENST00000392557 APOL1O14791 398 aa11.17□□□□□ -0.62
BRF1-204ENST00000392557 TWF2Q6IBS0 349 aaKnown RBP11.17□□□□□ -0.62
BRF1-204ENST00000392557 XYLT1Q86Y38 959 aa11.17□□□□□ -0.62
BRF1-204ENST00000392557 MFN1Q8IWA4 741 aa11.17□□□□□ -0.62
BRF1-204ENST00000392557 ARFGAP1Q8N6T3 406 aa11.17□□□□□ -0.62
BRF1-204ENST00000392557 PIP4K2CQ8TBX8 421 aa11.17□□□□□ -0.62
BRF1-204ENST00000392557 ECSITQ9BQ95 431 aa11.17□□□□□ -0.62
BRF1-204ENST00000392557 NFKBIZQ9BYH8 718 aa11.17□□□□□ -0.62
BRF1-204ENST00000392557 BCO2Q9BYV7 579 aa11.17□□□□□ -0.62
BRF1-204ENST00000392557 PCDHGC3Q9UN70 934 aa11.17□□□□□ -0.62
BRF1-204ENST00000392557 LRRC37A2A6NM11 1700 aa11.17□□□□□ -0.62
BRF1-204ENST00000392557 TRIP11Q15643 1979 aa11.17□□□□□ -0.62
BRF1-204ENST00000392557 MGAMO43451 1857 aa11.17□□□□□ -0.62
BRF1-204ENST00000392557 YWHAZP63104 245 aaKnown RBP11.17□□□□□ -0.62
BRF1-204ENST00000392557 KRT72Q14CN4 511 aa11.17□□□□□ -0.62
BRF1-204ENST00000392557 FAM187BQ17R55 369 aa11.17□□□□□ -0.62
BRF1-204ENST00000392557 EML3Q32P44 896 aa11.17□□□□□ -0.62
BRF1-204ENST00000392557 PPP1R26Q5T8A7 1209 aaPredicted RBP11.17□□□□□ -0.62
BRF1-204ENST00000392557 CST9Q5W186 159 aa11.17□□□□□ -0.62
BRF1-204ENST00000392557 NOTUMQ6P988 496 aa11.17□□□□□ -0.62
BRF1-204ENST00000392557 SLC27A1Q6PCB7 646 aa11.17□□□□□ -0.62
BRF1-204ENST00000392557 SCUBE3Q8IX30 993 aa11.17□□□□□ -0.62
BRF1-204ENST00000392557 UNC5BQ8IZJ1 945 aa11.17□□□□□ -0.62
BRF1-204ENST00000392557 ZNF513Q8N8E2 541 aaPredicted RBP11.17□□□□□ -0.62
BRF1-204ENST00000392557 RNF169Q8NCN4 708 aa11.17□□□□□ -0.62
BRF1-204ENST00000392557 CCNYQ8ND76 341 aa11.17□□□□□ -0.62
BRF1-204ENST00000392557 TMEM40Q8WWA1 233 aa11.17□□□□□ -0.62
BRF1-204ENST00000392557 RNF39Q9H2S5 420 aa11.17□□□□□ -0.62
BRF1-204ENST00000392557 TLE6Q9H808 572 aa11.17□□□□□ -0.62
BRF1-204ENST00000392557 ETAA1Q9NY74 926 aa11.17□□□□□ -0.62
BRF1-204ENST00000392557 SOX13Q9UN79 622 aa11.17□□□□□ -0.62
BRF1-204ENST00000392557 PLXNA1Q9UIW2 1896 aa11.17□□□□□ -0.62
BRF1-204ENST00000392557 PLXNB2O15031 1838 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 TGDSO95455 350 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 TRUB2O95900 331 aaKnown RBP11.16□□□□□ -0.62
BRF1-204ENST00000392557 CSH1P0DML2 217 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 CSH2P0DML3 217 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 GPD1P21695 349 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 HOXA11P31270 313 aaPredicted RBP11.16□□□□□ -0.62
BRF1-204ENST00000392557 MAP2K5Q13163 448 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 VWA5B1Q5TIE3 1220 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 CES3Q6UWW8 571 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 GALNT15Q8N3T1 639 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 LINC01465Q8N7H1 131 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 STKLD1Q8NE28 680 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 NMD3Q96D46 503 aaKnown RBP11.16□□□□□ -0.62
BRF1-204ENST00000392557 B3GNT5Q9BYG0 378 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 EBF3Q9H4W6 596 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 MAN1C1Q9NR34 630 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 WDR35Q9P2L0 1181 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 HESX1Q9UBX0 185 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 ITGA11Q9UKX5 1188 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 SLC15A5A6NIM6 579 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 A6NJR5 290 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 NEMP1O14524 444 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 SPAG6O75602 509 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 TRPA1O75762 1119 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 TM7SF2O76062 418 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 ITGBL1O95965 494 aaPredicted RBP11.16□□□□□ -0.62
BRF1-204ENST00000392557 VDRP11473 427 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 ETV4P43268 484 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 RANBP1P43487 201 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 COPAP53621 1224 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 LAMB3Q13751 1172 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 EFHC1Q5JVL4 640 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 RAPH1Q70E73 1250 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 ARMCX6Q7L4S7 300 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 CHSY1Q86X52 802 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 DEFB107AQ8IZN7 70 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 NME8Q8N427 588 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 DPEP3Q9H4B8 488 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 ACSS2Q9NR19 701 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 COL1A2P08123 1366 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 MYO18AQ92614 2054 aaKnown RBP11.16□□□□□ -0.62
BRF1-204ENST00000392557 A0A1B0GVG6 124 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 RBM47A0AV96 593 aaKnown RBP11.16□□□□□ -0.62
BRF1-204ENST00000392557 RRN3P2A6NIE6 340 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 E9PBE3 544 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 KLHL41O60662 606 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 APOEP02649 317 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 TYK2P29597 1187 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 SDC4P31431 198 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 GRIA1P42261 906 aa11.16□□□□□ -0.62
BRF1-204ENST00000392557 N4BP2L1Q5TBK1 243 aaPredicted RBP11.16□□□□□ -0.62
BRF1-204ENST00000392557 ARMC3Q5W041 872 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms