RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 P4HA2O15460 535 aa17.26■□□□□ 0.35
PTPRK-208ENST00000392449 AFPP02771 609 aaKnown RBP17.26■□□□□ 0.35
PTPRK-208ENST00000392449 KRT5P13647 590 aa17.26■□□□□ 0.35
PTPRK-208ENST00000392449 CEACAM1P13688 526 aa17.26■□□□□ 0.35
PTPRK-208ENST00000392449 CSRP1P21291 193 aaKnown RBP17.26■□□□□ 0.35
PTPRK-208ENST00000392449 CD70P32970 193 aa17.26■□□□□ 0.35
PTPRK-208ENST00000392449 ATXN3P54252 364 aaPredicted RBP17.26■□□□□ 0.35
PTPRK-208ENST00000392449 ARID5AQ03989 594 aa17.26■□□□□ 0.35
PTPRK-208ENST00000392449 CETN1Q12798 172 aa17.26■□□□□ 0.35
PTPRK-208ENST00000392449 CAMK4Q16566 473 aa17.26■□□□□ 0.35
PTPRK-208ENST00000392449 NADSYN1Q6IA69 706 aa17.26■□□□□ 0.35
PTPRK-208ENST00000392449 CHST9Q7L1S5 443 aa17.26■□□□□ 0.35
PTPRK-208ENST00000392449 ADIPOR2Q86V24 386 aa17.26■□□□□ 0.35
PTPRK-208ENST00000392449 FAM124AQ86V42 546 aa17.26■□□□□ 0.35
PTPRK-208ENST00000392449 SCUBE3Q8IX30 993 aa17.26■□□□□ 0.35
PTPRK-208ENST00000392449 MINDY1Q8N5J2 469 aa17.26■□□□□ 0.35
PTPRK-208ENST00000392449 CEP76Q8TAP6 659 aa17.26■□□□□ 0.35
PTPRK-208ENST00000392449 IRGQQ8WZA9 623 aa17.26■□□□□ 0.35
PTPRK-208ENST00000392449 SIPA1Q96FS4 1042 aa17.26■□□□□ 0.35
PTPRK-208ENST00000392449 PRICKLE1Q96MT3 831 aaPredicted RBP17.26■□□□□ 0.35
PTPRK-208ENST00000392449 CRACR2AQ9BSW2 395 aa17.26■□□□□ 0.35
PTPRK-208ENST00000392449 ITM2CQ9NQX7 267 aa17.26■□□□□ 0.35
PTPRK-208ENST00000392449 ST7Q9NRC1 585 aa17.26■□□□□ 0.35
PTPRK-208ENST00000392449 WSB2Q9NYS7 404 aaPredicted RBP17.26■□□□□ 0.35
PTPRK-208ENST00000392449 STIM2Q9P246 746 aa17.26■□□□□ 0.35
PTPRK-208ENST00000392449 CYTH4Q9UIA0 394 aa17.26■□□□□ 0.35
PTPRK-208ENST00000392449 GGA2Q9UJY4 613 aa17.26■□□□□ 0.35
PTPRK-208ENST00000392449 NAALADL1Q9UQQ1 740 aa17.26■□□□□ 0.35
PTPRK-208ENST00000392449 SPAARA0A1B0GVQ0 90 aa17.25■□□□□ 0.35
PTPRK-208ENST00000392449 NPC1O15118 1278 aa17.25■□□□□ 0.35
PTPRK-208ENST00000392449 TBL1XO60907 577 aa17.25■□□□□ 0.35
PTPRK-208ENST00000392449 DPP6P42658 865 aa17.25■□□□□ 0.35
PTPRK-208ENST00000392449 MARSP56192 900 aaKnown RBP17.25■□□□□ 0.35
PTPRK-208ENST00000392449 TBX4P57082 545 aa17.25■□□□□ 0.35
PTPRK-208ENST00000392449 PTPRNQ16849 979 aa17.25■□□□□ 0.35
PTPRK-208ENST00000392449 PLEKHG6Q3KR16 790 aa17.25■□□□□ 0.35
PTPRK-208ENST00000392449 FNDC3BQ53EP0 1204 aaKnown RBP17.25■□□□□ 0.35
PTPRK-208ENST00000392449 PIK3R6Q5UE93 754 aa17.25■□□□□ 0.35
PTPRK-208ENST00000392449 CREBRFQ8IUR6 639 aa17.25■□□□□ 0.35
PTPRK-208ENST00000392449 PRCCQ92733 491 aaPredicted RBP17.25■□□□□ 0.35
PTPRK-208ENST00000392449 FCRL2Q96LA5 508 aaPredicted RBP17.25■□□□□ 0.35
PTPRK-208ENST00000392449 MED15Q96RN5 788 aa17.25■□□□□ 0.35
PTPRK-208ENST00000392449 MTG2Q9H4K7 406 aa17.25■□□□□ 0.35
PTPRK-208ENST00000392449 UBE2TQ9NPD8 197 aaPredicted RBP17.25■□□□□ 0.35
PTPRK-208ENST00000392449 WASF3Q9UPY6 502 aa17.25■□□□□ 0.35
PTPRK-208ENST00000392449 AKAP13Q12802 2813 aa17.25■□□□□ 0.35
PTPRK-208ENST00000392449 CFAP47Q6ZTR5 3102 aa17.25■□□□□ 0.35
PTPRK-208ENST00000392449 MEI4A8MW99 385 aa17.24■□□□□ 0.35
PTPRK-208ENST00000392449 ARHGAP33O14559 1287 aa17.24■□□□□ 0.35
PTPRK-208ENST00000392449 PABPC1P11940 636 aaKnown RBP17.24■□□□□ 0.35
PTPRK-208ENST00000392449 GPD2P43304 727 aa17.24■□□□□ 0.35
PTPRK-208ENST00000392449 FAM193AP78312 1265 aa17.24■□□□□ 0.35
PTPRK-208ENST00000392449 SEMA3BQ13214 749 aa17.24■□□□□ 0.35
PTPRK-208ENST00000392449 STILQ15468 1287 aa17.24■□□□□ 0.35
PTPRK-208ENST00000392449 FOXR2Q6PJQ5 311 aa17.24■□□□□ 0.35
PTPRK-208ENST00000392449 ZCCHC9Q8N567 271 aaKnown RBP17.24■□□□□ 0.35
PTPRK-208ENST00000392449 DQX1Q8TE96 717 aaKnown RBP17.24■□□□□ 0.35
PTPRK-208ENST00000392449 FAM149B1Q96BN6 582 aa17.24■□□□□ 0.35
PTPRK-208ENST00000392449 HSFY1Q96LI6 401 aa17.24■□□□□ 0.35
PTPRK-208ENST00000392449 MIR1-1HGQ9H1L0 117 aa17.24■□□□□ 0.35
PTPRK-208ENST00000392449 TMEM245Q9H330 911 aa17.24■□□□□ 0.35
PTPRK-208ENST00000392449 TJP2Q9UDY2 1190 aa17.24■□□□□ 0.35
PTPRK-208ENST00000392449 XPO7Q9UIA9 1087 aaKnown RBP17.24■□□□□ 0.35
PTPRK-208ENST00000392449 CNTN6Q9UQ52 1028 aa17.24■□□□□ 0.35
PTPRK-208ENST00000392449 SLCO1B1Q9Y6L6 691 aa17.24■□□□□ 0.35
PTPRK-208ENST00000392449 ACSL4O60488 711 aa17.24■□□□□ 0.35
PTPRK-208ENST00000392449 LETM1O95202 739 aaPredicted RBP17.24■□□□□ 0.35
PTPRK-208ENST00000392449 LATS1O95835 1130 aa17.24■□□□□ 0.35
PTPRK-208ENST00000392449 GNA14O95837 355 aa17.24■□□□□ 0.35
PTPRK-208ENST00000392449 NUMBP49757 651 aa17.24■□□□□ 0.35
PTPRK-208ENST00000392449 RPS24P62847 133 aaKnown RBP17.24■□□□□ 0.35
PTPRK-208ENST00000392449 SYPL2Q5VXT5 272 aa17.24■□□□□ 0.35
PTPRK-208ENST00000392449 MBLAC2Q68D91 279 aa17.24■□□□□ 0.35
PTPRK-208ENST00000392449 KIAA0907Q7Z7F0 614 aaPredicted RBP17.24■□□□□ 0.35
PTPRK-208ENST00000392449 PIP4P1Q86T03 277 aa17.24■□□□□ 0.35
PTPRK-208ENST00000392449 METTL3Q86U44 580 aaKnown RBP17.24■□□□□ 0.35
PTPRK-208ENST00000392449 TAC4Q86UU9 113 aa17.24■□□□□ 0.35
PTPRK-208ENST00000392449 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.24■□□□□ 0.35
PTPRK-208ENST00000392449 GOLGA1Q92805 767 aa17.24■□□□□ 0.35
PTPRK-208ENST00000392449 CAMK1GQ96NX5 476 aa17.24■□□□□ 0.35
PTPRK-208ENST00000392449 NUCKS1Q9H1E3 243 aaKnown RBP17.24■□□□□ 0.35
PTPRK-208ENST00000392449 PCNX2A6NKB5 2137 aa17.23■□□□□ 0.35
PTPRK-208ENST00000392449 C1QTNF9BB2RNN3 333 aa17.23■□□□□ 0.35
PTPRK-208ENST00000392449 TIMM44O43615 452 aa17.23■□□□□ 0.35
PTPRK-208ENST00000392449 OPHN1O60890 802 aa17.23■□□□□ 0.35
PTPRK-208ENST00000392449 FBXO21O94952 628 aa17.23■□□□□ 0.35
PTPRK-208ENST00000392449 MOCS2O96007 188 aaPredicted RBP17.23■□□□□ 0.35
PTPRK-208ENST00000392449 C1QTNF9P0C862 333 aa17.23■□□□□ 0.35
PTPRK-208ENST00000392449 ACADMP11310 421 aa17.23■□□□□ 0.35
PTPRK-208ENST00000392449 SLC9A1P19634 815 aa17.23■□□□□ 0.35
PTPRK-208ENST00000392449 SLC11A2P49281 568 aa17.23■□□□□ 0.35
PTPRK-208ENST00000392449 PITX1P78337 314 aaPredicted RBP17.23■□□□□ 0.35
PTPRK-208ENST00000392449 CAMK2GQ13555 558 aaPredicted RBP17.23■□□□□ 0.35
PTPRK-208ENST00000392449 SYCP2LQ5T4T6 812 aa17.23■□□□□ 0.35
PTPRK-208ENST00000392449 DCAF12L1Q5VU92 463 aa17.23■□□□□ 0.35
PTPRK-208ENST00000392449 NUGGCQ68CJ6 796 aa17.23■□□□□ 0.35
PTPRK-208ENST00000392449 MMS22LQ6ZRQ5 1243 aa17.23■□□□□ 0.35
PTPRK-208ENST00000392449 AHI1Q8N157 1196 aa17.23■□□□□ 0.35
PTPRK-208ENST00000392449 CFAP52Q8N1V2 620 aa17.23■□□□□ 0.35
PTPRK-208ENST00000392449 HDDC3Q8N4P3 179 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms