RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 DYRK4Q9NR20 520 aa16.53■□□□□ 0.24
SHANK1-204ENST00000391814 AAR2Q9Y312 384 aaKnown RBP16.53■□□□□ 0.24
SHANK1-204ENST00000391814 ZMYM2Q9UBW7 1377 aa16.53■□□□□ 0.24
SHANK1-204ENST00000391814 MGAT1P26572 445 aa16.52■□□□□ 0.24
SHANK1-204ENST00000391814 GRK3P35626 688 aa16.52■□□□□ 0.24
SHANK1-204ENST00000391814 CCR3P51677 355 aa16.52■□□□□ 0.24
SHANK1-204ENST00000391814 CCNG1P51959 295 aa16.52■□□□□ 0.24
SHANK1-204ENST00000391814 CYP4F2P78329 520 aa16.52■□□□□ 0.24
SHANK1-204ENST00000391814 CYP4F3Q08477 520 aa16.52■□□□□ 0.24
SHANK1-204ENST00000391814 TRIM32Q13049 653 aa16.52■□□□□ 0.24
SHANK1-204ENST00000391814 RRP1BQ14684 758 aaKnown RBP16.52■□□□□ 0.24
SHANK1-204ENST00000391814 FAM172AQ8WUF8 416 aa16.52■□□□□ 0.24
SHANK1-204ENST00000391814 MMP19Q99542 508 aa16.52■□□□□ 0.24
SHANK1-204ENST00000391814 SPATA16Q9BXB7 569 aa16.52■□□□□ 0.24
SHANK1-204ENST00000391814 PNPLA3Q9NST1 481 aa16.52■□□□□ 0.24
SHANK1-204ENST00000391814 MTMR4Q9NYA4 1195 aa16.52■□□□□ 0.24
SHANK1-204ENST00000391814 ANAPC2Q9UJX6 822 aa16.52■□□□□ 0.24
SHANK1-204ENST00000391814 FARP1Q9Y4F1 1045 aaPredicted RBP16.52■□□□□ 0.24
SHANK1-204ENST00000391814 SETD1BQ9UPS6 1966 aaKnown RBP16.52■□□□□ 0.24
SHANK1-204ENST00000391814 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.52■□□□□ 0.24
SHANK1-204ENST00000391814 MTSS1O43312 755 aa16.52■□□□□ 0.24
SHANK1-204ENST00000391814 CNPP09543 421 aaKnown RBP16.52■□□□□ 0.24
SHANK1-204ENST00000391814 SUPT20HL1Q3ZLR7 823 aa16.52■□□□□ 0.24
SHANK1-204ENST00000391814 YME1L1Q96TA2 773 aa16.52■□□□□ 0.24
SHANK1-204ENST00000391814 CPNE1Q99829 537 aa16.52■□□□□ 0.24
SHANK1-204ENST00000391814 CRNNQ9UBG3 495 aaPredicted RBP16.52■□□□□ 0.24
SHANK1-204ENST00000391814 FGFR2P21802 821 aa16.52■□□□□ 0.24
SHANK1-204ENST00000391814 GPSM2P81274 684 aa16.52■□□□□ 0.24
SHANK1-204ENST00000391814 ATF7IP2Q5U623 682 aa16.52■□□□□ 0.24
SHANK1-204ENST00000391814 ZCCHC9Q8N567 271 aaKnown RBP16.52■□□□□ 0.24
SHANK1-204ENST00000391814 DGCR14Q96DF8 476 aaKnown RBP16.52■□□□□ 0.24
SHANK1-204ENST00000391814 MBOAT7Q96N66 472 aa16.52■□□□□ 0.24
SHANK1-204ENST00000391814 RGS18Q9NS28 235 aa16.52■□□□□ 0.24
SHANK1-204ENST00000391814 S100A1P23297 94 aa16.52■□□□□ 0.23
SHANK1-204ENST00000391814 MGAT5Q09328 741 aa16.52■□□□□ 0.23
SHANK1-204ENST00000391814 NEK5Q6P3R8 708 aa16.52■□□□□ 0.23
SHANK1-204ENST00000391814 CAMK1DQ8IU85 385 aa16.52■□□□□ 0.23
SHANK1-204ENST00000391814 FNDC5Q8NAU1 212 aa16.52■□□□□ 0.23
SHANK1-204ENST00000391814 CINPQ9BW66 212 aaPredicted RBP16.52■□□□□ 0.23
SHANK1-204ENST00000391814 MID1IP1Q9NPA3 183 aa16.52■□□□□ 0.23
SHANK1-204ENST00000391814 UBP1Q9NZI7 540 aa16.52■□□□□ 0.23
SHANK1-204ENST00000391814 GLI2P10070 1586 aa16.52■□□□□ 0.23
SHANK1-204ENST00000391814 ERI2A8K979 691 aaKnown RBP16.52■□□□□ 0.23
SHANK1-204ENST00000391814 ZBTB11O95625 1053 aaPredicted RBP16.52■□□□□ 0.23
SHANK1-204ENST00000391814 STAT5BP51692 787 aa16.52■□□□□ 0.23
SHANK1-204ENST00000391814 PTAR1Q7Z6K3 402 aaPredicted RBP16.52■□□□□ 0.23
SHANK1-204ENST00000391814 CLK4Q9HAZ1 481 aaKnown RBP16.52■□□□□ 0.23
SHANK1-204ENST00000391814 WBP11Q9Y2W2 641 aaKnown RBP16.52■□□□□ 0.23
SHANK1-204ENST00000391814 FAM220BPB1ANY3 271 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 PRKCEQ02156 737 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 HIST2H2ACQ16777 129 aaPredicted RBP16.51■□□□□ 0.23
SHANK1-204ENST00000391814 SCARA3Q6AZY7 606 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 HIST2H2AA3Q6FI13 130 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 FAM196AQ6ZSG2 479 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 NACC2Q96BF6 587 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 FAM84BQ96KN1 310 aaPredicted RBP16.51■□□□□ 0.23
SHANK1-204ENST00000391814 HOXC10Q9NYD6 342 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 CAMKK1Q8N5S9 505 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 DPP10Q8N608 796 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 FBXO30Q8TB52 745 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 TBCDQ9BTW9 1192 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 DNAJC18Q9H819 358 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 LRRC4BQ9NT99 713 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 SHOC2Q9UQ13 582 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 PCDHA3Q9Y5H8 950 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 GMEB1Q9Y692 573 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 BANF1O75531 89 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 ERCC2P18074 760 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 PGAM1P18669 254 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 MYL12AP19105 171 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 LTKP29376 864 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 CCNIQ14094 377 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 NR6A1Q15406 480 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 FNBP1LQ5T0N5 605 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 XPNPEP3Q9NQH7 507 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 ING4Q9UNL4 249 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 ANKRD6Q9Y2G4 727 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 PCDHGA3Q9Y5H0 932 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 CYP19A1P11511 503 aaPredicted RBP16.51■□□□□ 0.23
SHANK1-204ENST00000391814 TTKP33981 857 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 BOLA3Q53S33 107 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 KIAA0408Q6ZU52 694 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 HPDLQ96IR7 371 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 JMJD4Q9H9V9 463 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 PMF1-BGLAPU3KQ54 211 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 PRR36Q9H6K5 1346 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 SRRM3A6NNA2 597 aaPredicted RBP16.51■□□□□ 0.23
SHANK1-204ENST00000391814 LBPP18428 481 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 MAGP20916 626 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 ARL4DP49703 201 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 ITGA1P56199 1179 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 DENND5AQ6IQ26 1287 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 MRNIPQ6NTE8 343 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 NMRK2Q9NPI5 230 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 DNPEPQ9ULA0 475 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 RAD54BQ9Y620 910 aa16.51■□□□□ 0.23
SHANK1-204ENST00000391814 CHKAP35790 457 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 GIT2Q14161 759 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 MZT2AQ6P582 158 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 DPY30Q9C005 99 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms