RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 PIDD1Q9HB75 910 aa20.16■□□□□ 0.82
SHANK1-203ENST00000391813 CHST12Q9NRB3 414 aa20.16■□□□□ 0.82
SHANK1-203ENST00000391813 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.16■□□□□ 0.82
SHANK1-203ENST00000391813 C17orf102A2RUQ5 167 aa20.16■□□□□ 0.82
SHANK1-203ENST00000391813 S100A1P23297 94 aa20.16■□□□□ 0.82
SHANK1-203ENST00000391813 IL5RAQ01344 420 aa20.16■□□□□ 0.82
SHANK1-203ENST00000391813 PLEKHA8Q96JA3 519 aa20.16■□□□□ 0.82
SHANK1-203ENST00000391813 CGRRF1Q99675 332 aa20.16■□□□□ 0.82
SHANK1-203ENST00000391813 HBS1LQ9Y450 684 aaKnown RBP20.16■□□□□ 0.82
SHANK1-203ENST00000391813 SLC30A1Q9Y6M5 507 aa20.16■□□□□ 0.82
SHANK1-203ENST00000391813 INPP4BO15327 924 aa20.15■□□□□ 0.82
SHANK1-203ENST00000391813 PHLPP1O60346 1717 aa20.15■□□□□ 0.82
SHANK1-203ENST00000391813 CTSHP09668 335 aa20.15■□□□□ 0.82
SHANK1-203ENST00000391813 JAK1P23458 1154 aa20.15■□□□□ 0.82
SHANK1-203ENST00000391813 BFSP2Q13515 415 aa20.15■□□□□ 0.82
SHANK1-203ENST00000391813 CLNKQ7Z7G1 428 aa20.15■□□□□ 0.82
SHANK1-203ENST00000391813 PALB2Q86YC2 1186 aa20.15■□□□□ 0.82
SHANK1-203ENST00000391813 RNF148Q8N7C7 305 aa20.15■□□□□ 0.82
SHANK1-203ENST00000391813 BHLHE22Q8NFJ8 381 aaPredicted RBP20.15■□□□□ 0.82
SHANK1-203ENST00000391813 ASIC4Q96FT7 647 aa20.15■□□□□ 0.82
SHANK1-203ENST00000391813 FAM53CQ9NYF3 392 aa20.15■□□□□ 0.82
SHANK1-203ENST00000391813 PRPF19Q9UMS4 504 aaKnown RBP20.15■□□□□ 0.82
SHANK1-203ENST00000391813 CD4P01730 458 aa20.15■□□□□ 0.82
SHANK1-203ENST00000391813 MAPK11Q15759 364 aa20.15■□□□□ 0.82
SHANK1-203ENST00000391813 NDUFA5Q16718 116 aa20.15■□□□□ 0.82
SHANK1-203ENST00000391813 PPP1R14BQ96C90 147 aa20.15■□□□□ 0.82
SHANK1-203ENST00000391813 ZNF668Q96K58 619 aaPredicted RBP20.15■□□□□ 0.82
SHANK1-203ENST00000391813 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.15■□□□□ 0.82
SHANK1-203ENST00000391813 PKP3Q9Y446 797 aa20.15■□□□□ 0.82
SHANK1-203ENST00000391813 LYNP07948 512 aa20.15■□□□□ 0.82
SHANK1-203ENST00000391813 ETS2P15036 469 aa20.15■□□□□ 0.82
SHANK1-203ENST00000391813 ACAT1P24752 427 aaKnown RBP20.15■□□□□ 0.82
SHANK1-203ENST00000391813 GOLGA7BQ2TAP0 167 aa20.15■□□□□ 0.82
SHANK1-203ENST00000391813 ATF7IP2Q5U623 682 aa20.15■□□□□ 0.82
SHANK1-203ENST00000391813 OGTO15294 1046 aa20.15■□□□□ 0.82
SHANK1-203ENST00000391813 CSPG5O95196 566 aa20.15■□□□□ 0.82
SHANK1-203ENST00000391813 STAG3L1P0CL83 205 aa20.15■□□□□ 0.82
SHANK1-203ENST00000391813 BST1Q10588 318 aa20.15■□□□□ 0.82
SHANK1-203ENST00000391813 WASHC5Q12768 1159 aa20.15■□□□□ 0.82
SHANK1-203ENST00000391813 NR1D2Q14995 579 aa20.15■□□□□ 0.82
SHANK1-203ENST00000391813 LRRC38Q5VT99 294 aa20.15■□□□□ 0.82
SHANK1-203ENST00000391813 HDDC2Q7Z4H3 204 aa20.15■□□□□ 0.82
SHANK1-203ENST00000391813 ADGRA1Q86SQ6 560 aa20.15■□□□□ 0.82
SHANK1-203ENST00000391813 SYT17Q9BSW7 474 aa20.15■□□□□ 0.82
SHANK1-203ENST00000391813 IARS2Q9NSE4 1012 aaKnown RBP20.15■□□□□ 0.82
SHANK1-203ENST00000391813 FAM49BQ9NUQ9 324 aa20.15■□□□□ 0.82
SHANK1-203ENST00000391813 NDUFAF1Q9Y375 327 aa20.15■□□□□ 0.82
SHANK1-203ENST00000391813 ABCC6O95255 1503 aa20.15■□□□□ 0.82
SHANK1-203ENST00000391813 COL14A1Q05707 1796 aaKnown RBP20.14■□□□□ 0.82
SHANK1-203ENST00000391813 APOC4-APOC2K7ER74 178 aa20.14■□□□□ 0.82
SHANK1-203ENST00000391813 TAF4O00268 1085 aa20.14■□□□□ 0.82
SHANK1-203ENST00000391813 FSCN2O14926 492 aa20.14■□□□□ 0.82
SHANK1-203ENST00000391813 STX7O15400 261 aaKnown RBP20.14■□□□□ 0.82
SHANK1-203ENST00000391813 APOC2P02655 101 aa20.14■□□□□ 0.82
SHANK1-203ENST00000391813 TCF7P36402 384 aaPredicted RBP20.14■□□□□ 0.82
SHANK1-203ENST00000391813 NPTX2P47972 431 aa20.14■□□□□ 0.82
SHANK1-203ENST00000391813 OTUD3Q5T2D3 398 aaPredicted RBP20.14■□□□□ 0.82
SHANK1-203ENST00000391813 CAMKK2Q96RR4 588 aa20.14■□□□□ 0.82
SHANK1-203ENST00000391813 CPNE1Q99829 537 aa20.14■□□□□ 0.82
SHANK1-203ENST00000391813 ACSS3Q9H6R3 686 aa20.14■□□□□ 0.82
SHANK1-203ENST00000391813 TRPC7Q9HCX4 862 aa20.14■□□□□ 0.82
SHANK1-203ENST00000391813 EURLQ9NYK6 297 aa20.14■□□□□ 0.82
SHANK1-203ENST00000391813 AP4B1Q9Y6B7 739 aa20.14■□□□□ 0.82
SHANK1-203ENST00000391813 C5orf60A6NFR6 353 aa20.14■□□□□ 0.81
SHANK1-203ENST00000391813 MAP3K13O43283 966 aa20.14■□□□□ 0.81
SHANK1-203ENST00000391813 RTN3O95197 1032 aaPredicted RBP20.14■□□□□ 0.81
SHANK1-203ENST00000391813 RECQLP46063 649 aaPredicted RBP20.14■□□□□ 0.81
SHANK1-203ENST00000391813 ST13P50502 369 aaKnown RBP20.14■□□□□ 0.81
SHANK1-203ENST00000391813 NOGQ13253 232 aa20.14■□□□□ 0.81
SHANK1-203ENST00000391813 EFCAB12Q6NXP0 572 aa20.14■□□□□ 0.81
SHANK1-203ENST00000391813 SFRP1Q8N474 314 aa20.14■□□□□ 0.81
SHANK1-203ENST00000391813 FITM2Q8N6M3 262 aa20.14■□□□□ 0.81
SHANK1-203ENST00000391813 HPDLQ96IR7 371 aa20.14■□□□□ 0.81
SHANK1-203ENST00000391813 LATS2Q9NRM7 1088 aa20.14■□□□□ 0.81
SHANK1-203ENST00000391813 SNTNA6NMZ2 147 aa20.14■□□□□ 0.81
SHANK1-203ENST00000391813 RNF225M0QZC1 329 aaPredicted RBP20.14■□□□□ 0.81
SHANK1-203ENST00000391813 PEX1O43933 1283 aa20.14■□□□□ 0.81
SHANK1-203ENST00000391813 RHOBTB1O94844 696 aa20.14■□□□□ 0.81
SHANK1-203ENST00000391813 TLCD1Q96CP7 247 aa20.14■□□□□ 0.81
SHANK1-203ENST00000391813 DEPDC7Q96QD5 511 aa20.14■□□□□ 0.81
SHANK1-203ENST00000391813 KLHL3Q9UH77 587 aa20.14■□□□□ 0.81
SHANK1-203ENST00000391813 ANKRD6Q9Y2G4 727 aa20.14■□□□□ 0.81
SHANK1-203ENST00000391813 A0A096LPK6 155 aa20.14■□□□□ 0.81
SHANK1-203ENST00000391813 CPB1P15086 417 aa20.14■□□□□ 0.81
SHANK1-203ENST00000391813 SERPINH1P50454 418 aaKnown RBP20.14■□□□□ 0.81
SHANK1-203ENST00000391813 TOP3AQ13472 1001 aaPredicted RBP20.14■□□□□ 0.81
SHANK1-203ENST00000391813 ACAP1Q15027 740 aa20.14■□□□□ 0.81
SHANK1-203ENST00000391813 TTC23Q5W5X9 447 aa20.14■□□□□ 0.81
SHANK1-203ENST00000391813 NOP9Q86U38 636 aaKnown RBP20.14■□□□□ 0.81
SHANK1-203ENST00000391813 S100ZQ8WXG8 99 aa20.14■□□□□ 0.81
SHANK1-203ENST00000391813 PHF21AQ96BD5 680 aa20.14■□□□□ 0.81
SHANK1-203ENST00000391813 RMND5AQ9H871 391 aa20.14■□□□□ 0.81
SHANK1-203ENST00000391813 AFF4Q9UHB7 1163 aaKnown RBP20.14■□□□□ 0.81
SHANK1-203ENST00000391813 R3HDM2Q9Y2K5 976 aaKnown RBP20.14■□□□□ 0.81
SHANK1-203ENST00000391813 NRF1Q16656 503 aa20.13■□□□□ 0.81
SHANK1-203ENST00000391813 ACMSDQ8TDX5 336 aa20.13■□□□□ 0.81
SHANK1-203ENST00000391813 WDR70Q9NW82 654 aa20.13■□□□□ 0.81
SHANK1-203ENST00000391813 CIDEBQ9UHD4 219 aa20.13■□□□□ 0.81
SHANK1-203ENST00000391813 ALOX5P09917 674 aa20.13■□□□□ 0.81
SHANK1-203ENST00000391813 PGAM1P18669 254 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms