RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 PLAAQ9Y263 795 aa2.73□□□□□ -1.97
TRAV41-201ENST00000390468 TMEM5Q9Y2B1 443 aa2.73□□□□□ -1.97
TRAV41-201ENST00000390468 PCDHB6Q9Y5E3 794 aa2.73□□□□□ -1.97
TRAV41-201ENST00000390468 PCDHB4Q9Y5E5 795 aa2.73□□□□□ -1.97
TRAV41-201ENST00000390468 PCDHGB3Q9Y5G1 929 aa2.73□□□□□ -1.97
TRAV41-201ENST00000390468 PCDHA1Q9Y5I3 950 aa2.73□□□□□ -1.97
TRAV41-201ENST00000390468 HEY1Q9Y5J3 304 aa2.73□□□□□ -1.97
TRAV41-201ENST00000390468 ST14Q9Y5Y6 855 aa2.73□□□□□ -1.97
TRAV41-201ENST00000390468 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 A0A088AWK7 358 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 A0A0G2JLL6 359 aaPredicted RBP2.72□□□□□ -1.97
TRAV41-201ENST00000390468 LOC105371267A0A1B0GV96 52 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 PVALEFA0A1B0GWK0 134 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 SH3PXD2BA1X283 911 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 MAGEB16A2A368 324 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 ANKRD34BA5PLL1 514 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 SMIM23A6NLE4 172 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 EIF4E1BA6NMX2 242 aaKnown RBP2.72□□□□□ -1.97
TRAV41-201ENST00000390468 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.72□□□□□ -1.97
TRAV41-201ENST00000390468 E9PBE3 544 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 F8W810 466 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 ENC1O14682 589 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 KRT86O43790 486 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 FOXD2O60548 495 aaPredicted RBP2.72□□□□□ -1.97
TRAV41-201ENST00000390468 PPP1R11O60927 126 aaPredicted RBP2.72□□□□□ -1.97
TRAV41-201ENST00000390468 TMCC2O75069 709 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 USP2O75604 605 aaPredicted RBP2.72□□□□□ -1.97
TRAV41-201ENST00000390468 SERPINI2O75830 405 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 DGKIO75912 1065 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 SEC24DO94855 1032 aaPredicted RBP2.72□□□□□ -1.97
TRAV41-201ENST00000390468 KLHL2O95198 593 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 OR5F1O95221 314 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 CHEK2O96017 543 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 CFBP00751 764 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 ITGB3P05106 788 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 FYNP06241 537 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 ALOX5P09917 674 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 OR52Z1P0C646 297 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 POLR2MP0CAP2 368 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 MED14OSP0DP75 135 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 RBP3P10745 1247 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 ALAS1P13196 640 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 KRT13P13646 458 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 GFAPP14136 432 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 VEGFAP15692 232 aaPredicted RBP2.72□□□□□ -1.97
TRAV41-201ENST00000390468 VCLP18206 1134 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 GNAZP19086 355 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 POLR2CP19387 275 aaPredicted RBP2.72□□□□□ -1.97
TRAV41-201ENST00000390468 BMP6P22004 513 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 GLDCP23378 1020 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 CFL1P23528 166 aaKnown RBP2.72□□□□□ -1.97
TRAV41-201ENST00000390468 CMA1P23946 247 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 PSMA3P25788 255 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 ETFBP38117 255 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 EIF4A3P38919 411 aaKnown RBP2.72□□□□□ -1.97
TRAV41-201ENST00000390468 SLC1A1P43005 524 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 CBX5P45973 191 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 TUBP50607 506 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 TOB1P50616 345 aaPredicted RBP2.72□□□□□ -1.97
TRAV41-201ENST00000390468 NDUFA8P51970 172 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 HNRNPFP52597 415 aaKnown RBP2.72□□□□□ -1.97
TRAV41-201ENST00000390468 ARFIP2P53365 341 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 HMGCS2P54868 508 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 EIF3BP55884 814 aaKnown RBP2.72□□□□□ -1.97
TRAV41-201ENST00000390468 NUP107P57740 925 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 SNAP25P60880 206 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 RPL26P61254 145 aaKnown RBP2.72□□□□□ -1.97
TRAV41-201ENST00000390468 NAA20P61599 178 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 NCALDP61601 193 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 S100A12P80511 92 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 ATP2C1P98194 919 aaPredicted RBP2.72□□□□□ -1.97
TRAV41-201ENST00000390468 AMPD3Q01432 767 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 RELAQ04206 551 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 OCA2Q04671 838 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 TNK2Q07912 1038 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 GALNT1Q10472 559 aaPredicted RBP2.72□□□□□ -1.97
TRAV41-201ENST00000390468 STK4Q13043 487 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 SPP2Q13103 211 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 CUL1Q13616 776 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 VGLL4Q14135 290 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 GNA13Q14344 377 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 SLBPQ14493 270 aaKnown RBP eCLIP2.72□□□□□ -1.97
TRAV41-201ENST00000390468 ACAP2Q15057 778 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 PTPAQ15257 358 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 EPHA7Q15375 998 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 MAPRE1Q15691 268 aaKnown RBP2.72□□□□□ -1.97
TRAV41-201ENST00000390468 TSC22D1Q15714 1073 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 CALCRLQ16602 461 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 UBE2SQ16763 222 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 LONRF1Q17RB8 773 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 TMEM266Q2M3C6 531 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 SLC35G1Q2M3R5 365 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 RGS21Q2M5E4 152 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 KIAA1755Q5JYT7 1200 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 WIPI1Q5MNZ9 446 aaPredicted RBP2.72□□□□□ -1.97
TRAV41-201ENST00000390468 ZNF658Q5TYW1 1059 aaPredicted RBP2.72□□□□□ -1.97
TRAV41-201ENST00000390468 SNX30Q5VWJ9 437 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 PRAMEF13Q5VWM6 474 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 RESP18Q5W5W9 173 aa2.72□□□□□ -1.97
TRAV41-201ENST00000390468 ARL6IP4Q66PJ3 421 aaKnown RBP2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms