RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 SLC29A2Q14542 456 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 ZNF772Q68DY9 489 aaPredicted RBP13.58□□□□□ -0.24
HIPK3-202ENST00000379016 FNDC5Q8NAU1 212 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 COPS4Q9BT78 406 aa13.58□□□□□ -0.24
HIPK3-202ENST00000379016 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.58□□□□□ -0.24
HIPK3-202ENST00000379016 SSH2Q76I76 1423 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 ODC1P11926 461 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 POM121L1PQ3SYA9 428 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 ARMC8Q8IUR7 673 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 SYNE4Q8N205 404 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 TDRD5Q8NAT2 981 aaKnown RBP13.57□□□□□ -0.24
HIPK3-202ENST00000379016 CATSPER2Q96P56 530 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 INTS7Q9NVH2 962 aaKnown RBP13.57□□□□□ -0.24
HIPK3-202ENST00000379016 DDIT4Q9NX09 232 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 NUMA1Q14980 2115 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 FGFR3P22607 806 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 ITPKBP27987 946 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 SLC1A1P43005 524 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 DGUOKQ16854 277 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 AMIGO1Q86WK6 493 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 COLEC11Q9BWP8 271 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 TM6SF1Q9BZW5 370 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 CD209Q9NNX6 404 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 COG5Q9UP83 839 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 DAGLAQ9Y4D2 1042 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 LARGE1O95461 756 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 CCND1P24385 295 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 CHRNA5P30532 468 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 HPCAL1P37235 193 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 DNASE1L1P49184 302 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 PROM2Q8N271 834 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 RAD51AP1Q96B01 352 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 MCCC2Q9HCC0 563 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 TOPBP1Q92547 1522 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 CSF1RP07333 972 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 MYL9P24844 172 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 PRR5LQ6MZQ0 368 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 RELTQ969Z4 430 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 FAM111AQ96PZ2 611 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 IRAK3Q9Y616 596 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 UHRF1BP1Q6BDS2 1440 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 F8VZ95 297 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 ZBTB5O15062 677 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 KLHL41O60662 606 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 SEC22BO75396 215 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 GPD1P21695 349 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 KLRC2P26717 231 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 C21orf59P57076 290 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 TCEAL6Q6IPX3 200 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 ZC3H7AQ8IWR0 971 aaKnown RBP13.57□□□□□ -0.24
HIPK3-202ENST00000379016 NT5MQ9NPB1 228 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 RPS6KL1Q9Y6S9 549 aa13.57□□□□□ -0.24
HIPK3-202ENST00000379016 TM9SF1O15321 606 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 BBOX1O75936 387 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 NFKB1P19838 968 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 GARTP22102 1010 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 THOP1P52888 689 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 KPNB1Q14974 876 aaKnown RBP13.56□□□□□ -0.24
HIPK3-202ENST00000379016 SEL1L3Q68CR1 1132 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 BNC2Q6ZN30 1099 aaPredicted RBP13.56□□□□□ -0.24
HIPK3-202ENST00000379016 PSMD13Q9UNM6 376 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 CBFA2T3O75081 653 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 CCNA2P20248 432 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 EPHB3P54753 998 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 CCDC153Q494R4 210 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 APOL2Q9BQE5 337 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 CXorf56Q9H5V9 222 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 GPSM3Q9Y4H4 160 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 ARL5AQ9Y689 179 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 RBP3P10745 1247 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 MDH1P40925 334 aaKnown RBP13.56□□□□□ -0.24
HIPK3-202ENST00000379016 PTPN5P54829 565 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 RHOAP61586 193 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 GNASQ5JWF2 1037 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 HERC6Q8IVU3 1022 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 LRRC40Q9H9A6 602 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 ING4Q9UNL4 249 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 CD3EAPO15446 510 aaKnown RBP13.56□□□□□ -0.24
HIPK3-202ENST00000379016 CRATP43155 626 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 ACADSBP45954 432 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 RGS8P57771 180 aaPredicted RBP13.56□□□□□ -0.24
HIPK3-202ENST00000379016 CSHL1Q14406 222 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 GLRA4Q5JXX5 417 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 TCHHL1Q5QJ38 904 aaPredicted RBP13.56□□□□□ -0.24
HIPK3-202ENST00000379016 SYDE1Q6ZW31 735 aaPredicted RBP13.56□□□□□ -0.24
HIPK3-202ENST00000379016 ZNF366Q8N895 744 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 TMEM159Q96B96 161 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 PHF2O75151 1096 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 PCCAP05165 728 aaPredicted RBP13.56□□□□□ -0.24
HIPK3-202ENST00000379016 KCNA5P22460 613 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 ACLYP53396 1101 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 OXCT1P55809 520 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 RFX4Q33E94 735 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 ARSHQ5FYA8 562 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 TMEM132CQ8N3T6 1108 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 CHST4Q8NCG5 386 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 OSBP2Q969R2 916 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 UBP1Q9NZI7 540 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 AXIN2Q9Y2T1 843 aa13.56□□□□□ -0.24
HIPK3-202ENST00000379016 GRIP1Q9Y3R0 1128 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms