RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 TBX4P57082 545 aa15.4■□□□□ 0.06
NPHP4-201ENST00000378156 FAAP100Q0VG06 881 aa15.4■□□□□ 0.06
NPHP4-201ENST00000378156 AARS2Q5JTZ9 985 aaKnown RBP15.4■□□□□ 0.06
NPHP4-201ENST00000378156 UGT3A1Q6NUS8 523 aa15.4■□□□□ 0.06
NPHP4-201ENST00000378156 EFL1Q7Z2Z2 1120 aaKnown RBP15.4■□□□□ 0.06
NPHP4-201ENST00000378156 IFNEQ86WN2 208 aa15.4■□□□□ 0.06
NPHP4-201ENST00000378156 FICDQ9BVA6 458 aa15.4■□□□□ 0.06
NPHP4-201ENST00000378156 BCAS3Q9H6U6 928 aa15.4■□□□□ 0.06
NPHP4-201ENST00000378156 COG5Q9UP83 839 aa15.4■□□□□ 0.06
NPHP4-201ENST00000378156 CALB2P22676 271 aa15.4■□□□□ 0.06
NPHP4-201ENST00000378156 RPA3P35244 121 aaPredicted RBP15.4■□□□□ 0.06
NPHP4-201ENST00000378156 ATP6V1E1P36543 226 aa15.4■□□□□ 0.06
NPHP4-201ENST00000378156 AVPR1AP37288 418 aa15.4■□□□□ 0.06
NPHP4-201ENST00000378156 SERPINB8P50452 374 aa15.4■□□□□ 0.06
NPHP4-201ENST00000378156 NCKAP1LP55160 1127 aa15.4■□□□□ 0.06
NPHP4-201ENST00000378156 TAS2R40P59535 323 aa15.4■□□□□ 0.06
NPHP4-201ENST00000378156 TREML2Q5T2D2 321 aa15.4■□□□□ 0.06
NPHP4-201ENST00000378156 TBC1D19Q8N5T2 526 aa15.4■□□□□ 0.06
NPHP4-201ENST00000378156 ADAM32Q8TC27 787 aa15.4■□□□□ 0.06
NPHP4-201ENST00000378156 OTUB1Q96FW1 271 aaPredicted RBP15.4■□□□□ 0.06
NPHP4-201ENST00000378156 MYLK2Q9H1R3 596 aa15.4■□□□□ 0.06
NPHP4-201ENST00000378156 SUPT7LO94864 414 aa15.39■□□□□ 0.06
NPHP4-201ENST00000378156 POU4F1Q01851 419 aa15.39■□□□□ 0.06
NPHP4-201ENST00000378156 DMC1Q14565 340 aa15.39■□□□□ 0.06
NPHP4-201ENST00000378156 TRIM16LQ309B1 348 aa15.39■□□□□ 0.06
NPHP4-201ENST00000378156 STRA8Q7Z7C7 330 aa15.39■□□□□ 0.06
NPHP4-201ENST00000378156 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.39■□□□□ 0.06
NPHP4-201ENST00000378156 SPATA17Q96L03 361 aa15.39■□□□□ 0.06
NPHP4-201ENST00000378156 CNBD2Q96M20 576 aa15.39■□□□□ 0.06
NPHP4-201ENST00000378156 SH3GL2Q99962 352 aa15.39■□□□□ 0.06
NPHP4-201ENST00000378156 RIC8BQ9NVN3 520 aa15.39■□□□□ 0.06
NPHP4-201ENST00000378156 TMEM51Q9NW97 253 aa15.39■□□□□ 0.06
NPHP4-201ENST00000378156 PCDHB12Q9Y5F1 795 aa15.39■□□□□ 0.06
NPHP4-201ENST00000378156 IGKV6D-41A0A0C4DH26 115 aa15.39■□□□□ 0.05
NPHP4-201ENST00000378156 LIASO43766 372 aa15.39■□□□□ 0.05
NPHP4-201ENST00000378156 PGK1P00558 417 aa15.39■□□□□ 0.05
NPHP4-201ENST00000378156 SMIM10L2AP0DMW4 78 aa15.39■□□□□ 0.05
NPHP4-201ENST00000378156 SMIM10L2BP0DMW5 78 aa15.39■□□□□ 0.05
NPHP4-201ENST00000378156 CCDC130P13994 396 aa15.39■□□□□ 0.05
NPHP4-201ENST00000378156 FKBP1BP68106 108 aa15.39■□□□□ 0.05
NPHP4-201ENST00000378156 CCDC15Q0P6D6 951 aa15.39■□□□□ 0.05
NPHP4-201ENST00000378156 MPP3Q13368 585 aa15.39■□□□□ 0.05
NPHP4-201ENST00000378156 SUGP1Q8IWZ8 645 aaKnown RBP15.39■□□□□ 0.05
NPHP4-201ENST00000378156 GALNT4Q8N4A0 578 aa15.39■□□□□ 0.05
NPHP4-201ENST00000378156 CYGBQ8WWM9 190 aa15.39■□□□□ 0.05
NPHP4-201ENST00000378156 HTR3CQ8WXA8 447 aa15.39■□□□□ 0.05
NPHP4-201ENST00000378156 SCN3BQ9NY72 215 aa15.39■□□□□ 0.05
NPHP4-201ENST00000378156 TRIM17Q9Y577 477 aa15.39■□□□□ 0.05
NPHP4-201ENST00000378156 SNCAIPQ9Y6H5 919 aa15.39■□□□□ 0.05
NPHP4-201ENST00000378156 CBX4O00257 560 aa15.39■□□□□ 0.05
NPHP4-201ENST00000378156 KDELR1P24390 212 aa15.39■□□□□ 0.05
NPHP4-201ENST00000378156 CNTFP26441 200 aa15.39■□□□□ 0.05
NPHP4-201ENST00000378156 YWHAQP27348 245 aa15.39■□□□□ 0.05
NPHP4-201ENST00000378156 TNFSF9P41273 254 aa15.39■□□□□ 0.05
NPHP4-201ENST00000378156 GLRBP48167 497 aa15.39■□□□□ 0.05
NPHP4-201ENST00000378156 NR2C2P49116 596 aa15.39■□□□□ 0.05
NPHP4-201ENST00000378156 NOMO3P69849 1222 aa15.39■□□□□ 0.05
NPHP4-201ENST00000378156 MGAT5Q09328 741 aa15.39■□□□□ 0.05
NPHP4-201ENST00000378156 SDE2Q6IQ49 451 aa15.39■□□□□ 0.05
NPHP4-201ENST00000378156 SH3BP5LQ7L8J4 393 aa15.39■□□□□ 0.05
NPHP4-201ENST00000378156 TAGAPQ8N103 731 aa15.39■□□□□ 0.05
NPHP4-201ENST00000378156 SERPINB11Q96P15 392 aa15.39■□□□□ 0.05
NPHP4-201ENST00000378156 MRPL9Q9BYD2 267 aaKnown RBP15.39■□□□□ 0.05
NPHP4-201ENST00000378156 PDGFCQ9NRA1 345 aa15.39■□□□□ 0.05
NPHP4-201ENST00000378156 DTNAQ9Y4J8 743 aa15.39■□□□□ 0.05
NPHP4-201ENST00000378156 RIPK3Q9Y572 518 aa15.39■□□□□ 0.05
NPHP4-201ENST00000378156 KCPQ6ZWJ8 1503 aa15.39■□□□□ 0.05
NPHP4-201ENST00000378156 TCRBV7S2A1N4TA0A589 114 aa15.39■□□□□ 0.05
NPHP4-201ENST00000378156 CABYRO75952 493 aa15.39■□□□□ 0.05
NPHP4-201ENST00000378156 LTFP02788 710 aa15.39■□□□□ 0.05
NPHP4-201ENST00000378156 BDNFP23560 247 aa15.39■□□□□ 0.05
NPHP4-201ENST00000378156 KRR1Q13601 381 aaKnown RBP15.39■□□□□ 0.05
NPHP4-201ENST00000378156 PCBP1Q15365 356 aaKnown RBP eCLIP15.39■□□□□ 0.05
NPHP4-201ENST00000378156 LAYNQ6UX15 382 aa15.39■□□□□ 0.05
NPHP4-201ENST00000378156 ILDR2Q71H61 639 aa15.39■□□□□ 0.05
NPHP4-201ENST00000378156 PRCCQ92733 491 aaPredicted RBP15.39■□□□□ 0.05
NPHP4-201ENST00000378156 CDK5RAP1Q96SZ6 601 aaKnown RBP15.39■□□□□ 0.05
NPHP4-201ENST00000378156 ADGRA2Q96PE1 1338 aa15.39■□□□□ 0.05
NPHP4-201ENST00000378156 TTLL13PA6NNM8 815 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 APOC4-APOC2K7ER74 178 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 RAMP2O60895 175 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 VPS26AO75436 327 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 APOC2P02655 101 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 SERPIND1P05546 499 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 SOX11P35716 441 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 NUDT2P50583 147 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 SCNN1GP51170 649 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 CSE1LP55060 971 aaKnown RBP15.38■□□□□ 0.05
NPHP4-201ENST00000378156 RHOAP61586 193 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 ELF3P78545 371 aaPredicted RBP15.38■□□□□ 0.05
NPHP4-201ENST00000378156 BTG3Q14201 252 aaPredicted RBP15.38■□□□□ 0.05
NPHP4-201ENST00000378156 KRT72Q14CN4 511 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 QPCTQ16769 361 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 LBX2Q6XYB7 198 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 RRM2BQ7LG56 351 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 SCUBE1Q8IWY4 988 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 NUP93Q8N1F7 819 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 PPP1R13LQ8WUF5 828 aa15.38■□□□□ 0.05
NPHP4-201ENST00000378156 SRPK1Q96SB4 655 aaKnown RBP15.38■□□□□ 0.05
NPHP4-201ENST00000378156 ULBP1Q9BZM6 244 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms