RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 PHIPQ8WWQ0 1821 aa18.53■□□□□ 0.56
GNE-201ENST00000377902 CAPN8A6NHC0 703 aa18.53■□□□□ 0.56
GNE-201ENST00000377902 SPDYE16A6NNV3 312 aaPredicted RBP18.53■□□□□ 0.56
GNE-201ENST00000377902 ACKR2O00590 384 aa18.53■□□□□ 0.56
GNE-201ENST00000377902 KLHL2O95198 593 aa18.53■□□□□ 0.56
GNE-201ENST00000377902 VDRP11473 427 aa18.53■□□□□ 0.56
GNE-201ENST00000377902 OAZ1P54368 228 aa18.53■□□□□ 0.56
GNE-201ENST00000377902 TBL3Q12788 808 aaKnown RBP18.53■□□□□ 0.56
GNE-201ENST00000377902 GRAMD1BQ3KR37 738 aa18.53■□□□□ 0.56
GNE-201ENST00000377902 BOLA3Q53S33 107 aa18.53■□□□□ 0.56
GNE-201ENST00000377902 TIFABQ6ZNK6 161 aa18.53■□□□□ 0.56
GNE-201ENST00000377902 ACTRT2Q8TDY3 377 aa18.53■□□□□ 0.56
GNE-201ENST00000377902 NMD3Q96D46 503 aaKnown RBP18.53■□□□□ 0.56
GNE-201ENST00000377902 HPDLQ96IR7 371 aa18.53■□□□□ 0.56
GNE-201ENST00000377902 CPB2Q96IY4 423 aa18.53■□□□□ 0.56
GNE-201ENST00000377902 LGMNQ99538 433 aa18.53■□□□□ 0.56
GNE-201ENST00000377902 GBA2Q9HCG7 927 aaPredicted RBP18.53■□□□□ 0.56
GNE-201ENST00000377902 ZDHHC7Q9NXF8 308 aa18.53■□□□□ 0.56
GNE-201ENST00000377902 H3BNX3 289 aa18.52■□□□□ 0.56
GNE-201ENST00000377902 ARIH2O95376 493 aa18.52■□□□□ 0.56
GNE-201ENST00000377902 STAG3L1P0CL83 205 aa18.52■□□□□ 0.56
GNE-201ENST00000377902 ERVK-10P10266 1014 aa18.52■□□□□ 0.56
GNE-201ENST00000377902 MGAT1P26572 445 aa18.52■□□□□ 0.56
GNE-201ENST00000377902 ABCG1P45844 678 aa18.52■□□□□ 0.56
GNE-201ENST00000377902 SERPINB9P50453 376 aa18.52■□□□□ 0.56
GNE-201ENST00000377902 PDK3Q15120 406 aa18.52■□□□□ 0.56
GNE-201ENST00000377902 STILQ15468 1287 aa18.52■□□□□ 0.56
GNE-201ENST00000377902 GOLGA7BQ2TAP0 167 aa18.52■□□□□ 0.56
GNE-201ENST00000377902 PPP1R26Q5T8A7 1209 aaPredicted RBP18.52■□□□□ 0.56
GNE-201ENST00000377902 OLFML1Q6UWY5 402 aa18.52■□□□□ 0.56
GNE-201ENST00000377902 CATSPERGQ6ZRH7 1159 aa18.52■□□□□ 0.56
GNE-201ENST00000377902 ADGRG6Q86SQ4 1221 aa18.52■□□□□ 0.56
GNE-201ENST00000377902 PYROXD2Q8N2H3 581 aa18.52■□□□□ 0.56
GNE-201ENST00000377902 IFT122Q9HBG6 1241 aa18.52■□□□□ 0.56
GNE-201ENST00000377902 HACL1Q9UJ83 578 aa18.52■□□□□ 0.56
GNE-201ENST00000377902 VAV1P15498 845 aa18.52■□□□□ 0.56
GNE-201ENST00000377902 SDC4P31431 198 aa18.52■□□□□ 0.56
GNE-201ENST00000377902 CBLBQ13191 982 aa18.52■□□□□ 0.56
GNE-201ENST00000377902 SEPT1Q8WYJ6 367 aa18.52■□□□□ 0.56
GNE-201ENST00000377902 NCSTNQ92542 709 aa18.52■□□□□ 0.56
GNE-201ENST00000377902 PICK1Q9NRD5 415 aa18.52■□□□□ 0.56
GNE-201ENST00000377902 ITGA11Q9UKX5 1188 aa18.52■□□□□ 0.56
GNE-201ENST00000377902 SORCS3Q9UPU3 1222 aa18.52■□□□□ 0.56
GNE-201ENST00000377902 SF3B1O75533 1304 aaKnown RBP eCLIP18.52■□□□□ 0.558e-6■■■■■ 107
GNE-201ENST00000377902 GCATO75600 419 aa18.51■□□□□ 0.55
GNE-201ENST00000377902 SERPINE1P05121 402 aa18.51■□□□□ 0.55
GNE-201ENST00000377902 MLH1P40692 756 aa18.51■□□□□ 0.55
GNE-201ENST00000377902 NIPAL4Q0D2K0 466 aa18.51■□□□□ 0.55
GNE-201ENST00000377902 MXD4Q14582 209 aaPredicted RBP18.51■□□□□ 0.55
GNE-201ENST00000377902 SLC5A9Q2M3M2 681 aa18.51■□□□□ 0.55
GNE-201ENST00000377902 SLC9B1Q4ZJI4 515 aa18.51■□□□□ 0.55
GNE-201ENST00000377902 FAM160B1Q5W0V3 765 aa18.51■□□□□ 0.55
GNE-201ENST00000377902 SESTD1Q86VW0 696 aa18.51■□□□□ 0.55
GNE-201ENST00000377902 HACE1Q8IYU2 909 aa18.51■□□□□ 0.55
GNE-201ENST00000377902 PLD6Q8N2A8 252 aaKnown RBP18.51■□□□□ 0.55
GNE-201ENST00000377902 MAPK15Q8TD08 544 aa18.51■□□□□ 0.55
GNE-201ENST00000377902 EZH1Q92800 747 aaPredicted RBP18.51■□□□□ 0.55
GNE-201ENST00000377902 APBB2Q92870 758 aa18.51■□□□□ 0.55
GNE-201ENST00000377902 CXCL16Q9H2A7 254 aa18.51■□□□□ 0.55
GNE-201ENST00000377902 FZD8Q9H461 694 aa18.51■□□□□ 0.55
GNE-201ENST00000377902 G3BP2Q9UN86 482 aaKnown RBP18.51■□□□□ 0.55
GNE-201ENST00000377902 INPP5FQ9Y2H2 1132 aa18.51■□□□□ 0.55
GNE-201ENST00000377902 ITGA2BP08514 1039 aa18.51■□□□□ 0.55
GNE-201ENST00000377902 FOLH1Q04609 750 aa18.51■□□□□ 0.55
GNE-201ENST00000377902 NAPRTQ6XQN6 538 aa18.51■□□□□ 0.55
GNE-201ENST00000377902 TTC30AQ86WT1 665 aa18.51■□□□□ 0.55
GNE-201ENST00000377902 FBXW8Q8N3Y1 598 aa18.51■□□□□ 0.55
GNE-201ENST00000377902 ZNF781Q8N8C0 355 aa18.51■□□□□ 0.55
GNE-201ENST00000377902 PPP4R1Q8TF05 950 aa18.51■□□□□ 0.55
GNE-201ENST00000377902 NAT14Q8WUY8 206 aa18.51■□□□□ 0.55
GNE-201ENST00000377902 COG4Q9H9E3 785 aa18.51■□□□□ 0.55
GNE-201ENST00000377902 COPG2Q9UBF2 871 aa18.51■□□□□ 0.55
GNE-201ENST00000377902 BPTFQ12830 3046 aa18.51■□□□□ 0.55
GNE-201ENST00000377902 HCRTO43612 131 aa18.5■□□□□ 0.55
GNE-201ENST00000377902 GLRA3O75311 464 aa18.5■□□□□ 0.55
GNE-201ENST00000377902 RALBP11234 206 aa18.5■□□□□ 0.55
GNE-201ENST00000377902 ATXN3P54252 364 aaPredicted RBP18.5■□□□□ 0.55
GNE-201ENST00000377902 ABCE1P61221 599 aaKnown RBP18.5■□□□□ 0.55
GNE-201ENST00000377902 BTKQ06187 659 aa18.5■□□□□ 0.55
GNE-201ENST00000377902 TNFAIP1Q13829 316 aa18.5■□□□□ 0.55
GNE-201ENST00000377902 GK3PQ14409 553 aa18.5■□□□□ 0.55
GNE-201ENST00000377902 ARHGAP22Q7Z5H3 698 aa18.5■□□□□ 0.55
GNE-201ENST00000377902 ACOT1Q86TX2 421 aa18.5■□□□□ 0.55
GNE-201ENST00000377902 NCAPG2Q86XI2 1143 aa18.5■□□□□ 0.55
GNE-201ENST00000377902 CDKL3Q8IVW4 592 aaPredicted RBP18.5■□□□□ 0.55
GNE-201ENST00000377902 ARHGAP18Q8N392 663 aa18.5■□□□□ 0.55
GNE-201ENST00000377902 B4GALNT2Q8NHY0 566 aa18.5■□□□□ 0.55
GNE-201ENST00000377902 ARNTL2Q8WYA1 636 aa18.5■□□□□ 0.55
GNE-201ENST00000377902 MAGED2Q9UNF1 606 aaPredicted RBP18.5■□□□□ 0.55
GNE-201ENST00000377902 GOLGA8QA0A0J9YX86 632 aa18.5■□□□□ 0.55
GNE-201ENST00000377902 MYOCOSA0A1B0GUC4 107 aa18.5■□□□□ 0.55
GNE-201ENST00000377902 GOLGA8OA6NCC3 632 aa18.5■□□□□ 0.55
GNE-201ENST00000377902 SOWAHBA6NEL2 793 aa18.5■□□□□ 0.55
GNE-201ENST00000377902 GOLGA8NF8WBI6 632 aa18.5■□□□□ 0.55
GNE-201ENST00000377902 PAPSS1O43252 624 aaPredicted RBP18.5■□□□□ 0.55
GNE-201ENST00000377902 TPSB2P20231 275 aa18.5■□□□□ 0.55
GNE-201ENST00000377902 PHKA2P46019 1235 aa18.5■□□□□ 0.55
GNE-201ENST00000377902 PGGT1BP53609 377 aa18.5■□□□□ 0.55
GNE-201ENST00000377902 MBTD1Q05BQ5 628 aa18.5■□□□□ 0.55
GNE-201ENST00000377902 TLR1Q15399 786 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms