RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 F9P00740 461 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 CYP1A1P04798 512 aaPredicted RBP8.99□□□□□ -0.97
PCDH9-202ENST00000377865 STAG3L1P0CL83 205 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 TXNP10599 105 aaKnown RBP8.99□□□□□ -0.97
PCDH9-202ENST00000377865 CA8P35219 290 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 SLC26A2P50443 739 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 SLC6A3Q01959 620 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 ZNF235Q14590 738 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 C16orf72Q14CZ0 275 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 AGKQ53H12 422 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 DNERQ8NFT8 737 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 UBQLN1Q9UMX0 589 aaKnown RBP8.99□□□□□ -0.97
PCDH9-202ENST00000377865 VPS9D1Q9Y2B5 631 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 AK5Q9Y6K8 562 aa8.99□□□□□ -0.97
PCDH9-202ENST00000377865 OCM2P0CE71 109 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 OCMP0CE72 109 aaPredicted RBP8.98□□□□□ -0.97
PCDH9-202ENST00000377865 ZNF23P17027 643 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 ZNF135P52742 658 aaPredicted RBP8.98□□□□□ -0.97
PCDH9-202ENST00000377865 MRPS22P82650 360 aaKnown RBP8.98□□□□□ -0.97
PCDH9-202ENST00000377865 GRIK5Q16478 980 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 DALRD3Q5D0E6 543 aaKnown RBP8.98□□□□□ -0.97
PCDH9-202ENST00000377865 ZBTB41Q5SVQ8 909 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 ZNF554Q86TJ5 538 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 LRRC71Q8N4P6 559 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 BANPQ8N9N5 519 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 SEMA4DQ92854 862 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 ZNF670Q9BS34 389 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 CDH19Q9H159 772 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 PORCNQ9H237 461 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 IL1RL2Q9HB29 575 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 C8orf4Q9NR00 106 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 C15orf38-AP3S2A0A0A6YYH1 394 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 SPDYE2BA6NHP3 402 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 ERI2A8K979 691 aaKnown RBP8.98□□□□□ -0.97
PCDH9-202ENST00000377865 CBFA2T3O75081 653 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 SOAT2O75908 522 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 KRT75O95678 551 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 SLC25A27O95847 323 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 SPDYE6P0CI01 402 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 TAL1P17542 331 aaPredicted RBP8.98□□□□□ -0.97
PCDH9-202ENST00000377865 TKTP29401 623 aaKnown RBP8.98□□□□□ -0.97
PCDH9-202ENST00000377865 FOXN2P32314 431 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 KHDC1Q4VXA5 237 aaKnown RBP8.98□□□□□ -0.97
PCDH9-202ENST00000377865 ARPINQ7Z6K5 226 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 RELL1Q8IUW5 271 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 CCDC60Q8IWA6 550 aaPredicted RBP8.98□□□□□ -0.97
PCDH9-202ENST00000377865 RNF157Q96PX1 679 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 KCTD14Q9BQ13 255 aaPredicted RBP8.98□□□□□ -0.97
PCDH9-202ENST00000377865 AJAP1Q9UKB5 411 aaPredicted RBP8.98□□□□□ -0.97
PCDH9-202ENST00000377865 A0A0A0MRY4 1105 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 M0QYT0 321 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 TRAFD1O14545 582 aaPredicted RBP8.98□□□□□ -0.97
PCDH9-202ENST00000377865 MRASO14807 208 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 GYS1P13807 737 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 PTPN7P35236 360 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 TAF6P49848 677 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 CSE1LP55060 971 aaKnown RBP8.98□□□□□ -0.97
PCDH9-202ENST00000377865 CDH17Q12864 832 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 CDR2LQ86X02 465 aaPredicted RBP8.98□□□□□ -0.97
PCDH9-202ENST00000377865 RBM15BQ8NDT2 890 aaKnown RBP8.98□□□□□ -0.97
PCDH9-202ENST00000377865 SPATA13Q96N96 652 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 ATAD3AQ9NVI7 634 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 POLIQ9UNA4 740 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 AP4B1Q9Y6B7 739 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 CFAP99D6REC4 459 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 NR5A2O00482 541 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 ADAMTS3O15072 1205 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 TBC1D12O60347 775 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 TPSB2P20231 275 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 YY1P25490 414 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 CHRNB3Q05901 458 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 LAMTOR4Q0VGL1 99 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 ORC1Q13415 861 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 NFYCQ13952 458 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 TPSAB1Q15661 275 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 TWF2Q6IBS0 349 aaKnown RBP8.98□□□□□ -0.97
PCDH9-202ENST00000377865 TTC30AQ86WT1 665 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 PQLC1Q8N2U9 271 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 NMUR2Q9GZQ4 415 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 TMEM39BQ9GZU3 492 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 SIK2Q9H0K1 926 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 LHX5Q9H2C1 402 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 ASB7Q9H672 318 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 SLC38A7Q9NVC3 462 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 PTTG2Q9NZH5 202 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 TSPAN16Q9UKR8 245 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 RAP2CQ9Y3L5 183 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 BAZ2BQ9UIF8 2168 aaKnown RBP8.98□□□□□ -0.97
PCDH9-202ENST00000377865 PRR5-ARHGAP8B1AHC4 643 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 MYO1DO94832 1006 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 RTN3O95197 1032 aaPredicted RBP8.98□□□□□ -0.97
PCDH9-202ENST00000377865 HOXA10P31260 410 aaPredicted RBP8.98□□□□□ -0.97
PCDH9-202ENST00000377865 RPS6KA3P51812 740 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 SOX10P56693 466 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 ARHGAP8P85298 464 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 GLRA4Q5JXX5 417 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 CAMK1DQ8IU85 385 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 VAT1Q99536 393 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 TBC1D13Q9NVG8 400 aa8.98□□□□□ -0.97
PCDH9-202ENST00000377865 H3BNX3 289 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms