RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 ZNF7P17097 686 aaPredicted RBP13.95□□□□□ -0.18
GPC6-201ENST00000377047 GUCA1AP43080 201 aaPredicted RBP13.95□□□□□ -0.18
GPC6-201ENST00000377047 CD151P48509 253 aa13.95□□□□□ -0.18
GPC6-201ENST00000377047 SEL1L3Q68CR1 1132 aa13.95□□□□□ -0.18
GPC6-201ENST00000377047 LZTR1Q8N653 840 aa13.95□□□□□ -0.18
GPC6-201ENST00000377047 TBCBQ99426 244 aa13.95□□□□□ -0.18
GPC6-201ENST00000377047 MAN1A2O60476 641 aa13.95□□□□□ -0.18
GPC6-201ENST00000377047 RHBDL3P58872 404 aa13.95□□□□□ -0.18
GPC6-201ENST00000377047 SLC26A11Q86WA9 606 aa13.95□□□□□ -0.18
GPC6-201ENST00000377047 CDC42EP4Q9H3Q1 356 aaKnown RBP13.95□□□□□ -0.18
GPC6-201ENST00000377047 CCDC134Q9H6E4 229 aa13.95□□□□□ -0.18
GPC6-201ENST00000377047 TRPC4Q9UBN4 977 aa13.95□□□□□ -0.18
GPC6-201ENST00000377047 CARNS1A5YM72 827 aa13.95□□□□□ -0.18
GPC6-201ENST00000377047 TPST1O60507 370 aa13.95□□□□□ -0.18
GPC6-201ENST00000377047 GLRA2P23416 452 aa13.95□□□□□ -0.18
GPC6-201ENST00000377047 MGAT1P26572 445 aa13.95□□□□□ -0.18
GPC6-201ENST00000377047 CREMQ03060 361 aa13.95□□□□□ -0.18
GPC6-201ENST00000377047 NFYCQ13952 458 aa13.95□□□□□ -0.18
GPC6-201ENST00000377047 ARMC12Q5T9G4 340 aa13.95□□□□□ -0.18
GPC6-201ENST00000377047 MKL1Q969V6 931 aa13.95□□□□□ -0.18
GPC6-201ENST00000377047 PPP1R10Q96QC0 940 aaKnown RBP13.95□□□□□ -0.18
GPC6-201ENST00000377047 RAD54BQ9Y620 910 aa13.95□□□□□ -0.18
GPC6-201ENST00000377047 PPLO60437 1756 aa13.95□□□□□ -0.18
GPC6-201ENST00000377047 GJB6O95452 261 aa13.95□□□□□ -0.18
GPC6-201ENST00000377047 CD52P31358 61 aa13.95□□□□□ -0.18
GPC6-201ENST00000377047 IYDQ6PHW0 289 aa13.95□□□□□ -0.18
GPC6-201ENST00000377047 GRIN3AQ8TCU5 1115 aa13.95□□□□□ -0.18
GPC6-201ENST00000377047 DEFB118Q96PH6 123 aa13.95□□□□□ -0.18
GPC6-201ENST00000377047 CYP7B1O75881 506 aa13.95□□□□□ -0.18
GPC6-201ENST00000377047 WDR47O94967 919 aa13.95□□□□□ -0.18
GPC6-201ENST00000377047 TREML2Q5T2D2 321 aa13.95□□□□□ -0.18
GPC6-201ENST00000377047 FTHL17Q9BXU8 183 aa13.95□□□□□ -0.18
GPC6-201ENST00000377047 RGS18Q9NS28 235 aa13.95□□□□□ -0.18
GPC6-201ENST00000377047 DNAJC16Q9Y2G8 782 aa13.95□□□□□ -0.18
GPC6-201ENST00000377047 MRPS23Q9Y3D9 190 aaKnown RBP13.95□□□□□ -0.18
GPC6-201ENST00000377047 CTSEP14091 401 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 ALFQ53S48 1182 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 KCNMB4Q86W47 210 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 FAM9CQ8IZT9 166 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 TDRD5Q8NAT2 981 aaKnown RBP13.94□□□□□ -0.18
GPC6-201ENST00000377047 C3orf20Q8ND61 904 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 PHF21BQ96EK2 531 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 SLC4A9Q96Q91 983 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 IMPAD1Q9NX62 359 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 USE1Q9NZ43 259 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 GTF2A1LQ9UNN4 478 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 CASZ1Q86V15 1759 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 RNF103O00237 685 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 NFICP08651 508 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 PSMA4P25789 261 aaKnown RBP13.94□□□□□ -0.18
GPC6-201ENST00000377047 NR2C2P49116 596 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 POLR2LP62875 67 aaKnown RBP13.94□□□□□ -0.18
GPC6-201ENST00000377047 ATP6AP1LQ52LC2 224 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 KHDRBS2Q5VWX1 349 aaKnown RBP13.94□□□□□ -0.18
GPC6-201ENST00000377047 VGLL2Q8N8G2 317 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 HTATIP2Q9BUP3 242 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 MRIQ9BWK5 157 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 PCDH9Q9HC56 1237 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 TRHDEQ9UKU6 1024 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 MOXD2PA6NHM9 499 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 TLL1O43897 1013 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 SLC2A4P14672 509 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 CPA3P15088 417 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 EIF4BP23588 611 aaKnown RBP13.94□□□□□ -0.18
GPC6-201ENST00000377047 RRM2P31350 389 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 MMP13P45452 471 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 SEC24CP53992 1094 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 RPS7P62081 194 aaKnown RBP13.94□□□□□ -0.18
GPC6-201ENST00000377047 CDKAL1Q5VV42 579 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 SLC22A9Q8IVM8 553 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 PPP1R16AQ96I34 528 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 KCNK1O00180 336 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 MPOP05164 745 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 KRT8P05787 483 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 NR6A1Q15406 480 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 DNMT3LQ9UJW3 386 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 RAD51BO15315 384 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 TBC1D12O60347 775 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 HECTD3Q5T447 861 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 USP45Q70EL2 814 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 HEY2Q9UBP5 337 aa13.94□□□□□ -0.18
GPC6-201ENST00000377047 TMEM88BA6NKF7 163 aa13.93□□□□□ -0.18
GPC6-201ENST00000377047 PIK3CDO00329 1044 aa13.93□□□□□ -0.18
GPC6-201ENST00000377047 SLC9A3R1O14745 358 aaPredicted RBP13.93□□□□□ -0.18
GPC6-201ENST00000377047 TARSP26639 723 aaKnown RBP13.93□□□□□ -0.18
GPC6-201ENST00000377047 XRCC4Q13426 336 aa13.93□□□□□ -0.18
GPC6-201ENST00000377047 RAP1GAP2Q684P5 730 aa13.93□□□□□ -0.18
GPC6-201ENST00000377047 KIAA1324Q6UXG2 1013 aaKnown RBP13.93□□□□□ -0.18
GPC6-201ENST00000377047 C15orf52Q6ZUT6 534 aaKnown RBP13.93□□□□□ -0.18
GPC6-201ENST00000377047 SUGP1Q8IWZ8 645 aaKnown RBP13.93□□□□□ -0.18
GPC6-201ENST00000377047 FAM153AQ9UHL3 310 aa13.93□□□□□ -0.18
GPC6-201ENST00000377047 HMGCRP04035 888 aa13.93□□□□□ -0.18
GPC6-201ENST00000377047 ABCB1P08183 1280 aaPredicted RBP13.93□□□□□ -0.18
GPC6-201ENST00000377047 SERPINA4P29622 427 aa13.93□□□□□ -0.18
GPC6-201ENST00000377047 CBWD6Q4V339 395 aa13.93□□□□□ -0.18
GPC6-201ENST00000377047 CES3Q6UWW8 571 aa13.93□□□□□ -0.18
GPC6-201ENST00000377047 SPACA7Q96KW9 195 aa13.93□□□□□ -0.18
GPC6-201ENST00000377047 TCF3P15923 654 aa13.93□□□□□ -0.18
GPC6-201ENST00000377047 MIPP30301 263 aa13.93□□□□□ -0.18
GPC6-201ENST00000377047 THOP1P52888 689 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms