RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 DNAL1Q4LDG9 190 aa26.05■■□□□ 1.76
C9orf40-201ENST00000376854 N4BP2L1Q5TBK1 243 aaPredicted RBP26.05■■□□□ 1.76
C9orf40-201ENST00000376854 MBLAC2Q68D91 279 aa26.05■■□□□ 1.76
C9orf40-201ENST00000376854 PACS1Q6VY07 963 aa26.05■■□□□ 1.76
C9orf40-201ENST00000376854 NET1Q7Z628 596 aaPredicted RBP26.05■■□□□ 1.76
C9orf40-201ENST00000376854 PPFIBP2Q8ND30 876 aa26.05■■□□□ 1.76
C9orf40-201ENST00000376854 THTPAQ9BU02 230 aa26.05■■□□□ 1.76
C9orf40-201ENST00000376854 XPNPEP3Q9NQH7 507 aa26.05■■□□□ 1.76
C9orf40-201ENST00000376854 EMCNQ9ULC0 261 aa26.05■■□□□ 1.76
C9orf40-201ENST00000376854 CITO14578 2027 aa26.05■■□□□ 1.76
C9orf40-201ENST00000376854 H3BRB1 525 aa26.05■■□□□ 1.76
C9orf40-201ENST00000376854 TPP1O14773 563 aa26.05■■□□□ 1.76
C9orf40-201ENST00000376854 CIB2O75838 187 aa26.05■■□□□ 1.76
C9orf40-201ENST00000376854 SKIP12755 728 aa26.05■■□□□ 1.76
C9orf40-201ENST00000376854 SCNN1AP37088 669 aa26.05■■□□□ 1.76
C9orf40-201ENST00000376854 RPL10AP62906 217 aaKnown RBP26.05■■□□□ 1.76
C9orf40-201ENST00000376854 ZNF792Q3KQV3 632 aa26.05■■□□□ 1.76
C9orf40-201ENST00000376854 LRRC8BQ6P9F7 803 aa26.05■■□□□ 1.76
C9orf40-201ENST00000376854 WDR75Q8IWA0 830 aaKnown RBP26.05■■□□□ 1.76
C9orf40-201ENST00000376854 ULK2Q8IYT8 1036 aa26.05■■□□□ 1.76
C9orf40-201ENST00000376854 APOL6Q9BWW8 343 aa26.05■■□□□ 1.76
C9orf40-201ENST00000376854 TUT1Q9H6E5 874 aaKnown RBP26.05■■□□□ 1.76
C9orf40-201ENST00000376854 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP26.05■■□□□ 1.76
C9orf40-201ENST00000376854 GINS2Q9Y248 185 aa26.05■■□□□ 1.76
C9orf40-201ENST00000376854 WASF2Q9Y6W5 498 aa26.05■■□□□ 1.76
C9orf40-201ENST00000376854 PLXNA1Q9UIW2 1896 aa26.04■■□□□ 1.76
C9orf40-201ENST00000376854 GLRA3O75311 464 aa26.04■■□□□ 1.76
C9orf40-201ENST00000376854 LYPLA1O75608 230 aaPredicted RBP26.04■■□□□ 1.76
C9orf40-201ENST00000376854 MXRA7P84157 204 aa26.04■■□□□ 1.76
C9orf40-201ENST00000376854 PDE1CQ14123 709 aaPredicted RBP26.04■■□□□ 1.76
C9orf40-201ENST00000376854 ZBTB6Q15916 424 aa26.04■■□□□ 1.76
C9orf40-201ENST00000376854 GRIK4Q16099 956 aa26.04■■□□□ 1.76
C9orf40-201ENST00000376854 KIZQ2M2Z5 673 aa26.04■■□□□ 1.76
C9orf40-201ENST00000376854 MARCH8Q5T0T0 291 aa26.04■■□□□ 1.76
C9orf40-201ENST00000376854 FAM131BQ86XD5 332 aa26.04■■□□□ 1.76
C9orf40-201ENST00000376854 HACE1Q8IYU2 909 aa26.04■■□□□ 1.76
C9orf40-201ENST00000376854 CLPTM1LQ96KA5 538 aa26.04■■□□□ 1.76
C9orf40-201ENST00000376854 RNF19AQ9NV58 838 aa26.04■■□□□ 1.76
C9orf40-201ENST00000376854 HES2Q9Y543 173 aa26.04■■□□□ 1.76
C9orf40-201ENST00000376854 ITM2AO43736 263 aa26.04■■□□□ 1.76
C9orf40-201ENST00000376854 UPP2O95045 317 aa26.04■■□□□ 1.76
C9orf40-201ENST00000376854 MGAT1P26572 445 aa26.04■■□□□ 1.76
C9orf40-201ENST00000376854 C6orf163Q5TEZ5 329 aa26.04■■□□□ 1.76
C9orf40-201ENST00000376854 IRGCQ6NXR0 463 aa26.04■■□□□ 1.76
C9orf40-201ENST00000376854 ZNF410Q86VK4 478 aa26.04■■□□□ 1.76
C9orf40-201ENST00000376854 SHCBP1Q8NEM2 672 aa26.04■■□□□ 1.76
C9orf40-201ENST00000376854 PIWIL2Q8TC59 973 aaKnown RBP26.04■■□□□ 1.76
C9orf40-201ENST00000376854 ATP2A3Q93084 1043 aa26.04■■□□□ 1.76
C9orf40-201ENST00000376854 SIKE1Q9BRV8 207 aa26.04■■□□□ 1.76
C9orf40-201ENST00000376854 EIF2AQ9BY44 585 aaKnown RBP26.04■■□□□ 1.76
C9orf40-201ENST00000376854 DNAJC16Q9Y2G8 782 aa26.04■■□□□ 1.76
C9orf40-201ENST00000376854 MFSD11O43934 449 aa26.03■■□□□ 1.76
C9orf40-201ENST00000376854 FGF3P11487 239 aaPredicted RBP26.03■■□□□ 1.76
C9orf40-201ENST00000376854 HOXA11P31270 313 aaPredicted RBP26.03■■□□□ 1.76
C9orf40-201ENST00000376854 TRMT5Q32P41 509 aaKnown RBP26.03■■□□□ 1.76
C9orf40-201ENST00000376854 C9orf57Q5W0N0 161 aa26.03■■□□□ 1.76
C9orf40-201ENST00000376854 BSPRYQ5W0U4 402 aa26.03■■□□□ 1.76
C9orf40-201ENST00000376854 RIPOR1Q6ZS17 1223 aa26.03■■□□□ 1.76
C9orf40-201ENST00000376854 STRADAQ7RTN6 431 aa26.03■■□□□ 1.76
C9orf40-201ENST00000376854 ZNF778Q96MU6 729 aa26.03■■□□□ 1.76
C9orf40-201ENST00000376854 RNF103O00237 685 aa26.03■■□□□ 1.76
C9orf40-201ENST00000376854 MAP3K7O43318 606 aa26.03■■□□□ 1.76
C9orf40-201ENST00000376854 STK10O94804 968 aaKnown RBP26.03■■□□□ 1.76
C9orf40-201ENST00000376854 PGAM1P18669 254 aa26.03■■□□□ 1.76
C9orf40-201ENST00000376854 KCNA4P22459 653 aa26.03■■□□□ 1.76
C9orf40-201ENST00000376854 SLC1A6P48664 564 aa26.03■■□□□ 1.76
C9orf40-201ENST00000376854 TEDDM1Q5T9Z0 273 aa26.03■■□□□ 1.76
C9orf40-201ENST00000376854 TMEM154Q6P9G4 183 aa26.03■■□□□ 1.76
C9orf40-201ENST00000376854 NETO2Q8NC67 525 aa26.03■■□□□ 1.76
C9orf40-201ENST00000376854 PPP1R13LQ8WUF5 828 aa26.03■■□□□ 1.76
C9orf40-201ENST00000376854 ARNTL2Q8WYA1 636 aa26.03■■□□□ 1.76
C9orf40-201ENST00000376854 ANGPTL2Q9UKU9 493 aa26.03■■□□□ 1.76
C9orf40-201ENST00000376854 FZD10Q9ULW2 581 aa26.03■■□□□ 1.76
C9orf40-201ENST00000376854 TRIP11Q15643 1979 aa26.02■■□□□ 1.76
C9orf40-201ENST00000376854 PLIN3O60664 434 aa26.02■■□□□ 1.76
C9orf40-201ENST00000376854 LMO2P25791 158 aa26.02■■□□□ 1.76
C9orf40-201ENST00000376854 ACADSBP45954 432 aa26.02■■□□□ 1.76
C9orf40-201ENST00000376854 RPL34P49207 117 aaKnown RBP26.02■■□□□ 1.76
C9orf40-201ENST00000376854 SLC27A1Q6PCB7 646 aa26.02■■□□□ 1.76
C9orf40-201ENST00000376854 PANX3Q96QZ0 392 aa26.02■■□□□ 1.76
C9orf40-201ENST00000376854 CEP41Q9BYV8 373 aa26.02■■□□□ 1.76
C9orf40-201ENST00000376854 C1orf21Q9H246 121 aa26.02■■□□□ 1.76
C9orf40-201ENST00000376854 SLC24A3Q9HC58 644 aa26.02■■□□□ 1.76
C9orf40-201ENST00000376854 EIF2B3Q9NR50 452 aaKnown RBP26.02■■□□□ 1.76
C9orf40-201ENST00000376854 SLC7A8Q9UHI5 535 aa26.02■■□□□ 1.76
C9orf40-201ENST00000376854 SORCS3Q9UPU3 1222 aa26.02■■□□□ 1.76
C9orf40-201ENST00000376854 PSAT1Q9Y617 370 aa26.02■■□□□ 1.76
C9orf40-201ENST00000376854 AOC1P19801 751 aa26.02■■□□□ 1.76
C9orf40-201ENST00000376854 GNL1P36915 607 aaPredicted RBP26.02■■□□□ 1.76
C9orf40-201ENST00000376854 TUBP50607 506 aa26.02■■□□□ 1.76
C9orf40-201ENST00000376854 TMEM62Q0P6H9 643 aa26.02■■□□□ 1.76
C9orf40-201ENST00000376854 CCNJLQ8IV13 435 aa26.02■■□□□ 1.76
C9orf40-201ENST00000376854 GPRC5AQ8NFJ5 357 aa26.02■■□□□ 1.76
C9orf40-201ENST00000376854 UCMAQ8WVF2 138 aa26.02■■□□□ 1.76
C9orf40-201ENST00000376854 KBTBD7Q8WVZ9 684 aa26.02■■□□□ 1.76
C9orf40-201ENST00000376854 SYT15Q9BQS2 421 aa26.02■■□□□ 1.76
C9orf40-201ENST00000376854 DCDC2Q9UHG0 476 aa26.02■■□□□ 1.76
C9orf40-201ENST00000376854 OPHN1O60890 802 aa26.01■■□□□ 1.75
C9orf40-201ENST00000376854 MATKP42679 507 aa26.01■■□□□ 1.75
C9orf40-201ENST00000376854 SULT1E1P49888 294 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms