RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 A0A0J9YVX5 310 aa11.84□□□□□ -0.51
TM9SF2-201ENST00000376387 CASQ2O14958 399 aaPredicted RBP11.84□□□□□ -0.51
TM9SF2-201ENST00000376387 BIRC5O15392 142 aa11.84□□□□□ -0.51
TM9SF2-201ENST00000376387 PFDN1O60925 122 aa11.84□□□□□ -0.51
TM9SF2-201ENST00000376387 CRTAMO95727 393 aa11.84□□□□□ -0.51
TM9SF2-201ENST00000376387 LDHAP00338 332 aaKnown RBP11.84□□□□□ -0.51
TM9SF2-201ENST00000376387 HMGCRP04035 888 aa11.84□□□□□ -0.51
TM9SF2-201ENST00000376387 ALDOAP04075 364 aaKnown RBP11.84□□□□□ -0.51
TM9SF2-201ENST00000376387 FUT4P22083 530 aa11.84□□□□□ -0.51
TM9SF2-201ENST00000376387 ASPAP45381 313 aa11.84□□□□□ -0.51
TM9SF2-201ENST00000376387 CDK18Q07002 472 aa11.84□□□□□ -0.51
TM9SF2-201ENST00000376387 PCLAFQ15004 111 aa11.84□□□□□ -0.51
TM9SF2-201ENST00000376387 LGSNQ5TDP6 509 aa11.84□□□□□ -0.51
TM9SF2-201ENST00000376387 B3GNT6Q6ZMB0 384 aa11.84□□□□□ -0.51
TM9SF2-201ENST00000376387 MCF2L2Q86YR7 1114 aa11.84□□□□□ -0.51
TM9SF2-201ENST00000376387 AGR3Q8TD06 166 aa11.84□□□□□ -0.51
TM9SF2-201ENST00000376387 SIGLEC10Q96LC7 697 aa11.84□□□□□ -0.51
TM9SF2-201ENST00000376387 RBM38Q9H0Z9 239 aaKnown RBP11.84□□□□□ -0.51
TM9SF2-201ENST00000376387 SDCBP2Q9H190 292 aa11.84□□□□□ -0.51
TM9SF2-201ENST00000376387 RNPEPQ9H4A4 650 aa11.84□□□□□ -0.51
TM9SF2-201ENST00000376387 PTTG2Q9NZH5 202 aa11.84□□□□□ -0.51
TM9SF2-201ENST00000376387 PRELID1Q9Y255 219 aa11.84□□□□□ -0.51
TM9SF2-201ENST00000376387 AFG3L2Q9Y4W6 797 aa11.84□□□□□ -0.51
TM9SF2-201ENST00000376387 CNTNAP1P78357 1384 aa11.84□□□□□ -0.51
TM9SF2-201ENST00000376387 UTRNP46939 3433 aa11.84□□□□□ -0.51
TM9SF2-201ENST00000376387 FAM159BA6NKW6 160 aa11.83□□□□□ -0.51
TM9SF2-201ENST00000376387 AP1G1O43747 822 aa11.83□□□□□ -0.51
TM9SF2-201ENST00000376387 KLHL2O95198 593 aa11.83□□□□□ -0.51
TM9SF2-201ENST00000376387 CDK4P11802 303 aa11.83□□□□□ -0.51
TM9SF2-201ENST00000376387 RGS2P41220 211 aa11.83□□□□□ -0.51
TM9SF2-201ENST00000376387 PDE1CQ14123 709 aaPredicted RBP11.83□□□□□ -0.51
TM9SF2-201ENST00000376387 C6orf52Q5T4I8 152 aa11.83□□□□□ -0.51
TM9SF2-201ENST00000376387 DEPTORQ8TB45 409 aa11.83□□□□□ -0.51
TM9SF2-201ENST00000376387 DEPDC1BQ8WUY9 529 aa11.83□□□□□ -0.51
TM9SF2-201ENST00000376387 OSBPL10Q9BXB5 764 aa11.83□□□□□ -0.51
TM9SF2-201ENST00000376387 NIF3L1Q9GZT8 377 aa11.83□□□□□ -0.51
TM9SF2-201ENST00000376387 PCDHGC3Q9UN70 934 aa11.83□□□□□ -0.51
TM9SF2-201ENST00000376387 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 E9PBE3 544 aa11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 TPP1O14773 563 aa11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 KLHL41O60662 606 aa11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 GALK1P51570 392 aa11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 PRKG1Q13976 671 aa11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 BAATQ14032 418 aaPredicted RBP11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 DUS1LQ6P1R4 473 aaKnown RBP11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 DPH6Q7L8W6 267 aa11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 PLPP6Q8IY26 295 aa11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 RTKN2Q8IZC4 609 aa11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 PLD5Q8N7P1 536 aa11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 ATP6V0A1Q93050 837 aa11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 PPP1R36Q96LQ0 422 aa11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 TWNKQ96RR1 684 aa11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 IER2Q9BTL4 223 aa11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 MAGEB5Q9BZ81 275 aa11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 ZNF518BQ9C0D4 1074 aa11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 SENP6Q9GZR1 1112 aaPredicted RBP11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 SFMBT1Q9UHJ3 866 aa11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 PSAT1Q9Y617 370 aa11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 BPTFQ12830 3046 aa11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 TRDMT1O14717 391 aaKnown RBP11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 TMCC1O94876 653 aa11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 FBXO21O94952 628 aa11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 RPL5P46777 297 aaKnown RBP11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 CDKL1Q00532 357 aa11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 PPM1LQ5SGD2 360 aa11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 MAP3K21Q5TCX8 1036 aa11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 ARCQ7LC44 396 aa11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 MARVELD2Q8N4S9 558 aa11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 PQLC3Q8N755 202 aa11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 RNF148Q8N7C7 305 aa11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 PIP4K2CQ8TBX8 421 aa11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 KCNN1Q92952 543 aa11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 PGBD4Q96DM1 585 aa11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 PRPF18Q99633 342 aaKnown RBP11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 EPB41L1Q9H4G0 881 aa11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 RSAD1Q9HA92 442 aa11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 MGAMO43451 1857 aa11.83□□□□□ -0.52
TM9SF2-201ENST00000376387 YDJCA8MPS7 323 aa11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 H3BSA7 217 aa11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 TCF7P36402 384 aaPredicted RBP11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 MTTPP55157 894 aa11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 ACTR2P61160 394 aa11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 OSTNP61366 133 aa11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 XIAPP98170 497 aa11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 TFAMQ00059 246 aaKnown RBP11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 C4orf46Q504U0 113 aa11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 CCSAPQ6IQ19 270 aaPredicted RBP11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 RAB3IL1Q8TBN0 382 aa11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 MAPK15Q8TD08 544 aa11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 JADE3Q92613 823 aa11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 TCHPQ9BT92 498 aa11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 PAK5Q9P286 719 aa11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 SORCS3Q9UPU3 1222 aa11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 COX4I1P13073 169 aa11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 SLC5A2P31639 672 aa11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 GABRB2P47870 512 aa11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 YWHAEP62258 255 aaKnown RBP11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 MRPS22P82650 360 aaKnown RBP11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 SLC10A2Q12908 348 aaPredicted RBP11.82□□□□□ -0.52
TM9SF2-201ENST00000376387 PDK1Q15118 436 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms