RNA–Protein interactions for RNA: ENST00000373388.6

CSMD2-206, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSMD2, Length 13,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-206ENST00000373388 ILF3Q12906 894 aaKnown RBP eCLIP7.18□□□□□ -1.26
CSMD2-206ENST00000373388 LRRC24Q50LG9 513 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 WDR45BQ5MNZ6 344 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 RNF220Q5VTB9 566 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 ZNF677Q86XU0 584 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 PGRMC2O15173 223 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 ETS2P15036 469 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 CYP11B2P19099 503 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 PTENP60484 403 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 TFAMQ00059 246 aaKnown RBP7.18□□□□□ -1.26
CSMD2-206ENST00000373388 ANKS6Q68DC2 871 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 LRRC47Q8N1G4 583 aaKnown RBP7.18□□□□□ -1.26
CSMD2-206ENST00000373388 ZSWIM1Q9BR11 485 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 APEX2Q9UBZ4 518 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 DNMT1P26358 1616 aaKnown RBP7.18□□□□□ -1.26
CSMD2-206ENST00000373388 SPARCP09486 303 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 MAPK12P53778 367 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 IL18R1Q13478 541 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 DENND1BQ6P3S1 775 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 CHMP1BQ7LBR1 199 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 TTC7BQ86TV6 843 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 C12orf50Q8NA57 414 aaPredicted RBP7.18□□□□□ -1.26
CSMD2-206ENST00000373388 SSX3Q99909 188 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 METTL8Q9H825 291 aaKnown RBP7.18□□□□□ -1.26
CSMD2-206ENST00000373388 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.18□□□□□ -1.26
CSMD2-206ENST00000373388 TRIP11Q15643 1979 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 CHL1O00533 1208 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 KCNN4O15554 427 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 KHDRBS3O75525 346 aaKnown RBP7.18□□□□□ -1.26
CSMD2-206ENST00000373388 OR7A10O76100 309 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 METTL18O95568 372 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 PSMA1P25786 263 aaKnown RBP7.18□□□□□ -1.26
CSMD2-206ENST00000373388 USP10Q14694 798 aaKnown RBP7.18□□□□□ -1.26
CSMD2-206ENST00000373388 ANO4Q32M45 955 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 TCEAL6Q6IPX3 200 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 TMC4Q7Z404 712 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 DCAF5Q96JK2 942 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 MTMR9Q96QG7 549 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 WRNIP1Q96S55 665 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 ADPRHL2Q9NX46 363 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 SLC25A13Q9UJS0 675 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 RPS6KA6Q9UK32 745 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 CYP2E1P05181 493 aaPredicted RBP7.18□□□□□ -1.26
CSMD2-206ENST00000373388 LYNP07948 512 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 SERPINA6P08185 405 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 ARPP19P56211 112 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 RPS7P62081 194 aaKnown RBP7.18□□□□□ -1.26
CSMD2-206ENST00000373388 PABPC4Q13310 644 aaKnown RBP eCLIP7.18□□□□□ -1.26
CSMD2-206ENST00000373388 OTUD3Q5T2D3 398 aaPredicted RBP7.18□□□□□ -1.26
CSMD2-206ENST00000373388 UGT3A1Q6NUS8 523 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 CAMKK1Q8N5S9 505 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 HERC2P3Q9BVR0 1158 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 PUS7LQ9H0K6 701 aaKnown RBP7.18□□□□□ -1.26
CSMD2-206ENST00000373388 GANQ9H2C0 597 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 REEP1Q9H902 201 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 SNX3O60493 162 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 CRYZL1O95825 349 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 KCNJ2P63252 427 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 C11orf63Q6NUN7 778 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 ZYG11AQ6WRX3 759 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 GATAD2BQ8WXI9 593 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 RBM17Q96I25 401 aaKnown RBP7.18□□□□□ -1.26
CSMD2-206ENST00000373388 EHD4Q9H223 541 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 KDM5CP41229 1560 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 ZNF14P17017 642 aaPredicted RBP7.18□□□□□ -1.26
CSMD2-206ENST00000373388 GTF2H3Q13889 308 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 MTF1Q14872 753 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 CCDC71Q8IV32 467 aaPredicted RBP7.18□□□□□ -1.26
CSMD2-206ENST00000373388 GLYCTKQ8IVS8 523 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 TNFAIP8L1Q8WVP5 186 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 TEKT5Q96M29 485 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 ATXN3LQ9H3M9 355 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 ZNF112Q9UJU3 913 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 ERVK-11Q9UQG0 969 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 REXO2Q9Y3B8 237 aaKnown RBP7.18□□□□□ -1.26
CSMD2-206ENST00000373388 C2orf71A6NGG8 1288 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 NR5A2O00482 541 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 CBX6O95503 412 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 ZNF667Q5HYK9 610 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 TTC23LQ6PF05 361 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 ZNF280BQ86YH2 543 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 EMC1Q8N766 993 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 ITFG1Q8TB96 612 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 RASGRP4Q8TDF6 673 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 GAL3ST3Q96A11 431 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 KCNN2Q9H2S1 579 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 MAB21L2Q9Y586 359 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 BIVM-ERCC5R4GMW8 1640 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 SEC16AO15027 2179 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 TSPOAP1O95153 1857 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 CLDN3O15551 220 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 CHST10O43529 356 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 CACNB1Q02641 598 aaPredicted RBP7.18□□□□□ -1.26
CSMD2-206ENST00000373388 PPP1R15BQ5SWA1 713 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 HELQQ8TDG4 1101 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 PHF20Q9BVI0 1012 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 YTHDC2Q9H6S0 1430 aaKnown RBP7.18□□□□□ -1.26
CSMD2-206ENST00000373388 STX16-NPEPL1H3BU86 382 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 STX16O14662 325 aa7.18□□□□□ -1.26
CSMD2-206ENST00000373388 IL18RAPO95256 599 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms