RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 SAT1P21673 171 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 KDELR1P24390 212 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 HOXA7P31268 230 aaPredicted RBP5.58□□□□□ -1.52
ATG4A-204ENST00000372246 NUDT2P50583 147 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 COPAP53621 1224 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 SLC18A1P54219 525 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 GCNT1Q02742 428 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 DMP1Q13316 513 aaPredicted RBP5.58□□□□□ -1.52
ATG4A-204ENST00000372246 MPP3Q13368 585 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 ITGA9Q13797 1035 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 HNRNPDQ14103 355 aaKnown RBP5.58□□□□□ -1.52
ATG4A-204ENST00000372246 C16orf72Q14CZ0 275 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 PSMD6Q15008 389 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 CNGA3Q16281 694 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 PITRM1Q5JRX3 1037 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 TRAPPC3LQ5T215 181 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 PDPK2PQ6A1A2 396 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 SWSAP1Q6NVH7 229 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 CASC4Q6P4E1 433 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 NAPRTQ6XQN6 538 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 B3GNT6Q6ZMB0 384 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 UNC5AQ6ZN44 842 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 CHSY1Q86X52 802 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 SNX29P2Q8IUI4 249 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 MAP4K3Q8IVH8 894 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 TRIM42Q8IWZ5 723 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 MYO1HQ8N1T3 1032 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 PLD6Q8N2A8 252 aaKnown RBP5.58□□□□□ -1.52
ATG4A-204ENST00000372246 SPATA6LQ8N4H0 392 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 ZNF781Q8N8C0 355 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 ZNF398Q8TD17 642 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 NKD2Q969F2 451 aaPredicted RBP5.58□□□□□ -1.52
ATG4A-204ENST00000372246 DGCR14Q96DF8 476 aaKnown RBP5.58□□□□□ -1.52
ATG4A-204ENST00000372246 KLHL32Q96NJ5 620 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 LENG8Q96PV6 779 aaPredicted RBP5.58□□□□□ -1.52
ATG4A-204ENST00000372246 CDRT15Q96T59 188 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 RBM38Q9H0Z9 239 aaKnown RBP5.58□□□□□ -1.52
ATG4A-204ENST00000372246 PCDHAC1Q9H158 963 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.58□□□□□ -1.52
ATG4A-204ENST00000372246 UTP6Q9NYH9 597 aaKnown RBP5.58□□□□□ -1.52
ATG4A-204ENST00000372246 PI4KBQ9UBF8 816 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 EBF1Q9UH73 591 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 FBXO40Q9UH90 709 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 IP6K2Q9UHH9 426 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 ZNF180Q9UJW8 692 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 CCPG1Q9ULG6 757 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 RBMX2Q9Y388 322 aaKnown RBP5.58□□□□□ -1.52
ATG4A-204ENST00000372246 FIS1Q9Y3D6 152 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 MYH9P35579 1960 aaKnown RBP5.58□□□□□ -1.52
ATG4A-204ENST00000372246 TCRBV5S1A1TA0A578 114 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 C7orf72A4D263 438 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 LRRIQ4A6NIV6 560 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 TMEM233B4DJY2 109 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 POLRMTO00411 1230 aaKnown RBP5.58□□□□□ -1.52
ATG4A-204ENST00000372246 TPP1O14773 563 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 NRP1O14786 923 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 P4HA2O15460 535 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 USP12O75317 370 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 SEC24DO94855 1032 aaPredicted RBP5.58□□□□□ -1.52
ATG4A-204ENST00000372246 FBXO21O94952 628 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 HMGCRP04035 888 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 PRKCGP05129 697 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 BPGMP07738 259 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 FGF3P11487 239 aaPredicted RBP5.58□□□□□ -1.52
ATG4A-204ENST00000372246 ENO3P13929 434 aaPredicted RBP5.58□□□□□ -1.52
ATG4A-204ENST00000372246 UGT1A6P19224 532 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 MIPP30301 263 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 EPHX2P34913 555 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 GRM5P41594 1212 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 SLC1A6P48664 564 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 NAA20P61599 178 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 PRAMEP78395 509 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 IRF9Q00978 393 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 CBX3Q13185 183 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 MAP7Q14244 749 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 GRM2Q14416 872 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 PPP2R5DQ14738 602 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 PTPRNQ16849 979 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 ZACNQ401N2 412 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 PRPF38BQ5VTL8 546 aaKnown RBP5.58□□□□□ -1.52
ATG4A-204ENST00000372246 MBLAC2Q68D91 279 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 OGFOD2Q6N063 350 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 TMEM179Q6ZVK1 233 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 SLC26A11Q86WA9 606 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 ARHGAP24Q8N264 748 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 ARHGAP18Q8N392 663 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 SAMD3Q8N6K7 520 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 GSDMBQ8TAX9 411 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 C17orf50Q8WW18 174 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 TWNKQ96RR1 684 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 SORT1Q99523 831 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 SIKE1Q9BRV8 207 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 NAA50Q9GZZ1 169 aaKnown RBP5.58□□□□□ -1.52
ATG4A-204ENST00000372246 CAAP1Q9H8G2 361 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 POPDC2Q9HBU9 364 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 AGO4Q9HCK5 861 aaKnown RBP5.58□□□□□ -1.52
ATG4A-204ENST00000372246 MRPL47Q9HD33 250 aaKnown RBP5.58□□□□□ -1.52
ATG4A-204ENST00000372246 PFDN4Q9NQP4 134 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 TMPRSS4Q9NRS4 437 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 RBAKQ9NYW8 714 aaPredicted RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms