RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 DHDDSQ86SQ9 333 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 NIPA2Q8N8Q9 360 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 APOPT1Q96IL0 206 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 PIWIL1Q96J94 861 aaKnown RBP16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 DRC3Q9H069 523 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 XYLT2Q9H1B5 865 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 TMED5Q9Y3A6 229 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 A8MXQ7 604 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 PEX1O43933 1283 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 PRPSAP2O60256 369 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 MICAL2O94851 1124 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 TOP3BO95985 862 aaKnown RBP16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 HOXC6P09630 235 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 AP3M2P53677 418 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 PDK1Q15118 436 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 PPP1R14CQ8TAE6 165 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 OXNAD1Q96HP4 312 aaPredicted RBP16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 ZBED3Q96IU2 234 aaPredicted RBP16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 AGAP3Q96P47 875 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 PEBP4Q96S96 227 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 SDCBP2Q9H190 292 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 KCNK13Q9HB14 408 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 ANLNQ9NQW6 1124 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 ARHGEF4Q9NR80 690 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 PIH1D1Q9NWS0 290 aaKnown RBP16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 MTO1Q9Y2Z2 717 aaKnown RBP16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 KANSL1LA0AUZ9 987 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 DCAF8L1A6NGE4 600 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 TRUB2O95900 331 aaKnown RBP16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 NFICP08651 508 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 RBL1P28749 1068 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 CLCN3P51790 818 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 EFNA5P52803 228 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 ALDH18A1P54886 795 aaKnown RBP16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 SLC25A3Q00325 362 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 CHI3L2Q15782 390 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 ANKRD20A4Q4UJ75 823 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 ATF7IP2Q5U623 682 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 BSPRYQ5W0U4 402 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 FAM160B1Q5W0V3 765 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 OGFOD2Q6N063 350 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 LRRC43Q8N309 656 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 RXFP2Q8WXD0 754 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 SNX27Q96L92 541 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 MPHOSPH6Q99547 160 aaKnown RBP16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 RPF1Q9H9Y2 349 aaKnown RBP16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 TRPC7Q9HCX4 862 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 TIMMDC1Q9NPL8 285 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 ASNSD1Q9NWL6 643 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 CPSF3Q9UKF6 684 aaKnown RBP16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 PCDHGC3Q9UN70 934 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 NR2E3Q9Y5X4 410 aa16.45■□□□□ 0.22
SYNCRIP-202ENST00000369622 TMX2-CTNND1H3BSU7 103 aa16.44■□□□□ 0.22
SYNCRIP-202ENST00000369622 FARP2O94887 1054 aaPredicted RBP16.44■□□□□ 0.22
SYNCRIP-202ENST00000369622 ZBED1O96006 694 aa16.44■□□□□ 0.22
SYNCRIP-202ENST00000369622 DLDP09622 509 aaKnown RBP16.44■□□□□ 0.22
SYNCRIP-202ENST00000369622 PTPN7P35236 360 aa16.44■□□□□ 0.22
SYNCRIP-202ENST00000369622 ACTR3P61158 418 aa16.44■□□□□ 0.22
SYNCRIP-202ENST00000369622 PTPN11Q06124 597 aaPredicted RBP16.44■□□□□ 0.22
SYNCRIP-202ENST00000369622 DCAF15Q66K64 600 aa16.44■□□□□ 0.22
SYNCRIP-202ENST00000369622 FASTKD5Q7L8L6 764 aaKnown RBP16.44■□□□□ 0.22
SYNCRIP-202ENST00000369622 TMPRSS6Q8IU80 811 aa16.44■□□□□ 0.22
SYNCRIP-202ENST00000369622 SLC44A1Q8WWI5 657 aa16.44■□□□□ 0.22
SYNCRIP-202ENST00000369622 SENP6Q9GZR1 1112 aaPredicted RBP16.44■□□□□ 0.22
SYNCRIP-202ENST00000369622 RSAD1Q9HA92 442 aa16.44■□□□□ 0.22
SYNCRIP-202ENST00000369622 CROTQ9UKG9 612 aa16.44■□□□□ 0.22
SYNCRIP-202ENST00000369622 E9PBE3 544 aa16.44■□□□□ 0.22
SYNCRIP-202ENST00000369622 KRT37O76014 449 aa16.44■□□□□ 0.22
SYNCRIP-202ENST00000369622 GMPSP49915 693 aaPredicted RBP16.44■□□□□ 0.22
SYNCRIP-202ENST00000369622 TSPY1Q01534 308 aa16.44■□□□□ 0.22
SYNCRIP-202ENST00000369622 TGFBIQ15582 683 aa16.44■□□□□ 0.22
SYNCRIP-202ENST00000369622 CASC4Q6P4E1 433 aa16.44■□□□□ 0.22
SYNCRIP-202ENST00000369622 Q6ZNX1 250 aa16.44■□□□□ 0.22
SYNCRIP-202ENST00000369622 TMC7Q7Z402 723 aa16.44■□□□□ 0.22
SYNCRIP-202ENST00000369622 NUDCD3Q8IVD9 361 aa16.44■□□□□ 0.22
SYNCRIP-202ENST00000369622 BBS5Q8N3I7 341 aa16.44■□□□□ 0.22
SYNCRIP-202ENST00000369622 NIFKQ9BYG3 293 aaKnown RBP16.44■□□□□ 0.22
SYNCRIP-202ENST00000369622 COQ6Q9Y2Z9 468 aa16.44■□□□□ 0.22
SYNCRIP-202ENST00000369622 HMGCRP04035 888 aa16.43■□□□□ 0.22
SYNCRIP-202ENST00000369622 C6orf222P0C671 652 aaPredicted RBP16.43■□□□□ 0.22
SYNCRIP-202ENST00000369622 BCAR1P56945 870 aa16.43■□□□□ 0.22
SYNCRIP-202ENST00000369622 BST1Q10588 318 aa16.43■□□□□ 0.22
SYNCRIP-202ENST00000369622 PRKD1Q15139 912 aaPredicted RBP16.43■□□□□ 0.22
SYNCRIP-202ENST00000369622 HSDL1Q3SXM5 330 aa16.43■□□□□ 0.22
SYNCRIP-202ENST00000369622 METTL21CQ5VZV1 264 aa16.43■□□□□ 0.22
SYNCRIP-202ENST00000369622 WDR75Q8IWA0 830 aaKnown RBP16.43■□□□□ 0.22
SYNCRIP-202ENST00000369622 C12orf29Q8N999 325 aa16.43■□□□□ 0.22
SYNCRIP-202ENST00000369622 SEPT1Q8WYJ6 367 aa16.43■□□□□ 0.22
SYNCRIP-202ENST00000369622 PPP1R14BQ96C90 147 aa16.43■□□□□ 0.22
SYNCRIP-202ENST00000369622 SPATA17Q96L03 361 aa16.43■□□□□ 0.22
SYNCRIP-202ENST00000369622 DHRS4Q9BTZ2 278 aa16.43■□□□□ 0.22
SYNCRIP-202ENST00000369622 ELOVL4Q9GZR5 314 aa16.43■□□□□ 0.22
SYNCRIP-202ENST00000369622 HOXC10Q9NYD6 342 aa16.43■□□□□ 0.22
SYNCRIP-202ENST00000369622 E7ESA3 106 aa16.43■□□□□ 0.22
SYNCRIP-202ENST00000369622 FAM189A1O60320 539 aa16.43■□□□□ 0.22
SYNCRIP-202ENST00000369622 MAFO75444 373 aaPredicted RBP16.43■□□□□ 0.22
SYNCRIP-202ENST00000369622 STIP1P31948 543 aaKnown RBP16.43■□□□□ 0.22
SYNCRIP-202ENST00000369622 CATSPERGQ6ZRH7 1159 aa16.43■□□□□ 0.22
SYNCRIP-202ENST00000369622 SLC26A11Q86WA9 606 aa16.43■□□□□ 0.22
SYNCRIP-202ENST00000369622 NETO2Q8NC67 525 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms