RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 BCLAF3A2AJT9 711 aaKnown RBP17.35■□□□□ 0.37
PHGDH-202ENST00000369409 CFAP69A5D8W1 941 aa17.35■□□□□ 0.37
PHGDH-202ENST00000369409 TLR5O60602 858 aa17.35■□□□□ 0.37
PHGDH-202ENST00000369409 STIP1P31948 543 aaKnown RBP17.35■□□□□ 0.37
PHGDH-202ENST00000369409 CHKAP35790 457 aa17.35■□□□□ 0.37
PHGDH-202ENST00000369409 ALDH1A3P47895 512 aa17.35■□□□□ 0.37
PHGDH-202ENST00000369409 HCAR3P49019 387 aa17.35■□□□□ 0.37
PHGDH-202ENST00000369409 ZNF135P52742 658 aaPredicted RBP17.35■□□□□ 0.37
PHGDH-202ENST00000369409 XRCC4Q13426 336 aa17.35■□□□□ 0.37
PHGDH-202ENST00000369409 PAFAH1B3Q15102 231 aaKnown RBP17.35■□□□□ 0.37
PHGDH-202ENST00000369409 SLC45A4Q5BKX6 768 aa17.35■□□□□ 0.37
PHGDH-202ENST00000369409 CFAP58Q5T655 872 aa17.35■□□□□ 0.37
PHGDH-202ENST00000369409 HIBCHQ6NVY1 386 aaPredicted RBP17.35■□□□□ 0.37
PHGDH-202ENST00000369409 MIB1Q86YT6 1006 aa17.35■□□□□ 0.37
PHGDH-202ENST00000369409 TAB3Q8N5C8 712 aaPredicted RBP17.35■□□□□ 0.37
PHGDH-202ENST00000369409 FCRL2Q96LA5 508 aaPredicted RBP17.35■□□□□ 0.37
PHGDH-202ENST00000369409 ZIM3Q96PE6 472 aa17.35■□□□□ 0.37
PHGDH-202ENST00000369409 HAPLN3Q96S86 360 aa17.35■□□□□ 0.37
PHGDH-202ENST00000369409 UBE2OQ9C0C9 1292 aaKnown RBP17.35■□□□□ 0.37
PHGDH-202ENST00000369409 OSBPL2Q9H1P3 480 aa17.35■□□□□ 0.37
PHGDH-202ENST00000369409 USP29Q9HBJ7 922 aa17.35■□□□□ 0.37
PHGDH-202ENST00000369409 FNIP2Q9P278 1114 aa17.35■□□□□ 0.37
PHGDH-202ENST00000369409 STK39Q9UEW8 545 aa17.35■□□□□ 0.37
PHGDH-202ENST00000369409 XPO7Q9UIA9 1087 aaKnown RBP17.35■□□□□ 0.37
PHGDH-202ENST00000369409 TPX2Q9ULW0 747 aaKnown RBP17.35■□□□□ 0.37
PHGDH-202ENST00000369409 NUP205Q92621 2012 aa17.35■□□□□ 0.37
PHGDH-202ENST00000369409 DOCK4Q8N1I0 1966 aa17.35■□□□□ 0.37
PHGDH-202ENST00000369409 LILRB3O75022 631 aa17.35■□□□□ 0.37
PHGDH-202ENST00000369409 CSPG5O95196 566 aa17.35■□□□□ 0.37
PHGDH-202ENST00000369409 CSH1P0DML2 217 aa17.35■□□□□ 0.37
PHGDH-202ENST00000369409 CSH2P0DML3 217 aa17.35■□□□□ 0.37
PHGDH-202ENST00000369409 HMGA1P17096 107 aaKnown RBP17.35■□□□□ 0.37
PHGDH-202ENST00000369409 EPHB2P29323 1055 aa17.35■□□□□ 0.37
PHGDH-202ENST00000369409 ELF1P32519 619 aa17.35■□□□□ 0.37
PHGDH-202ENST00000369409 CTNNB1P35222 781 aa17.35■□□□□ 0.37
PHGDH-202ENST00000369409 CREMQ03060 361 aa17.35■□□□□ 0.37
PHGDH-202ENST00000369409 KRT222Q8N1A0 295 aa17.35■□□□□ 0.37
PHGDH-202ENST00000369409 SLC39A13Q96H72 371 aa17.35■□□□□ 0.37
PHGDH-202ENST00000369409 ZNF512Q96ME7 567 aaPredicted RBP17.35■□□□□ 0.37
PHGDH-202ENST00000369409 MARCH2Q9P0N8 246 aa17.35■□□□□ 0.37
PHGDH-202ENST00000369409 NEU3Q9UQ49 428 aa17.35■□□□□ 0.37
PHGDH-202ENST00000369409 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.34■□□□□ 0.37
PHGDH-202ENST00000369409 KCNU1A8MYU2 1149 aa17.34■□□□□ 0.37
PHGDH-202ENST00000369409 H3BQF6 201 aa17.34■□□□□ 0.37
PHGDH-202ENST00000369409 SRGAP2BP0DMP2 458 aa17.34■□□□□ 0.37
PHGDH-202ENST00000369409 PMS2P54278 862 aa17.34■□□□□ 0.37
PHGDH-202ENST00000369409 TWF1Q12792 350 aa17.34■□□□□ 0.37
PHGDH-202ENST00000369409 GPS2Q13227 327 aa17.34■□□□□ 0.37
PHGDH-202ENST00000369409 PLD1Q13393 1074 aa17.34■□□□□ 0.37
PHGDH-202ENST00000369409 RNASEH2BQ5TBB1 312 aaKnown RBP17.34■□□□□ 0.37
PHGDH-202ENST00000369409 GPR65Q8IYL9 337 aa17.34■□□□□ 0.37
PHGDH-202ENST00000369409 PDZD8Q8NEN9 1154 aa17.34■□□□□ 0.37
PHGDH-202ENST00000369409 PHOSPHO2Q8TCD6 241 aa17.34■□□□□ 0.37
PHGDH-202ENST00000369409 RTP4Q96DX8 246 aa17.34■□□□□ 0.37
PHGDH-202ENST00000369409 PWWP2AQ96N64 755 aa17.34■□□□□ 0.37
PHGDH-202ENST00000369409 RUFY1Q96T51 708 aa17.34■□□□□ 0.37
PHGDH-202ENST00000369409 LBHD1Q9BQE6 289 aaPredicted RBP17.34■□□□□ 0.37
PHGDH-202ENST00000369409 HTATIP2Q9BUP3 242 aa17.34■□□□□ 0.37
PHGDH-202ENST00000369409 RXFP1Q9HBX9 757 aa17.34■□□□□ 0.37
PHGDH-202ENST00000369409 DNAJC17Q9NVM6 304 aaKnown RBP17.34■□□□□ 0.37
PHGDH-202ENST00000369409 INSL5Q9Y5Q6 135 aa17.34■□□□□ 0.37
PHGDH-202ENST00000369409 AGPSO00116 658 aa17.33■□□□□ 0.37
PHGDH-202ENST00000369409 APOEP02649 317 aa17.33■□□□□ 0.37
PHGDH-202ENST00000369409 HMBSP08397 361 aa17.33■□□□□ 0.37
PHGDH-202ENST00000369409 CNPP09543 421 aaKnown RBP17.33■□□□□ 0.37
PHGDH-202ENST00000369409 VAV1P15498 845 aa17.33■□□□□ 0.37
PHGDH-202ENST00000369409 VEPH1Q14D04 833 aa17.33■□□□□ 0.37
PHGDH-202ENST00000369409 TRIP4Q15650 581 aaPredicted RBP17.33■□□□□ 0.37
PHGDH-202ENST00000369409 TAF12Q16514 161 aa17.33■□□□□ 0.37
PHGDH-202ENST00000369409 ALS2CLQ60I27 953 aa17.33■□□□□ 0.37
PHGDH-202ENST00000369409 RWDD4Q6NW29 188 aaKnown RBP17.33■□□□□ 0.37
PHGDH-202ENST00000369409 BZW1Q7L1Q6 419 aaKnown RBP17.33■□□□□ 0.37
PHGDH-202ENST00000369409 TP53INP2Q8IXH6 220 aa17.33■□□□□ 0.37
PHGDH-202ENST00000369409 TCEAL8Q8IYN2 117 aa17.33■□□□□ 0.37
PHGDH-202ENST00000369409 NPWQ8N729 165 aa17.33■□□□□ 0.37
PHGDH-202ENST00000369409 TFB1MQ8WVM0 346 aaKnown RBP17.33■□□□□ 0.37
PHGDH-202ENST00000369409 LGMNQ99538 433 aa17.33■□□□□ 0.37
PHGDH-202ENST00000369409 MTIF3Q9H2K0 278 aaKnown RBP17.33■□□□□ 0.37
PHGDH-202ENST00000369409 PLAAQ9Y263 795 aa17.33■□□□□ 0.37
PHGDH-202ENST00000369409 HS3ST4Q9Y661 456 aa17.33■□□□□ 0.37
PHGDH-202ENST00000369409 SLC12A8A0AV02 714 aa17.33■□□□□ 0.36
PHGDH-202ENST00000369409 HACD1B0YJ81 288 aa17.33■□□□□ 0.36
PHGDH-202ENST00000369409 SPATA31D3P0C874 917 aa17.33■□□□□ 0.36
PHGDH-202ENST00000369409 SLC2A3P11169 496 aa17.33■□□□□ 0.36
PHGDH-202ENST00000369409 ACTN2P35609 894 aa17.33■□□□□ 0.36
PHGDH-202ENST00000369409 BASP1P80723 227 aaKnown RBP17.33■□□□□ 0.36
PHGDH-202ENST00000369409 SLMAPQ14BN4 828 aa17.33■□□□□ 0.36
PHGDH-202ENST00000369409 MORF4L2Q15014 288 aa17.33■□□□□ 0.36
PHGDH-202ENST00000369409 PIK3R6Q5UE93 754 aa17.33■□□□□ 0.36
PHGDH-202ENST00000369409 MANEALQ5VSG8 457 aa17.33■□□□□ 0.36
PHGDH-202ENST00000369409 HEATR6Q6AI08 1181 aaKnown RBP17.33■□□□□ 0.36
PHGDH-202ENST00000369409 SPATA31D4Q6ZUB0 917 aa17.33■□□□□ 0.36
PHGDH-202ENST00000369409 TMC7Q7Z402 723 aa17.33■□□□□ 0.36
PHGDH-202ENST00000369409 IQCKQ8N0W5 287 aa17.33■□□□□ 0.36
PHGDH-202ENST00000369409 OVCA2Q8WZ82 227 aa17.33■□□□□ 0.36
PHGDH-202ENST00000369409 SHOC2Q9UQ13 582 aa17.33■□□□□ 0.36
PHGDH-202ENST00000369409 SSX2IPQ9Y2D8 614 aa17.33■□□□□ 0.36
PHGDH-202ENST00000369409 NR2E3Q9Y5X4 410 aa17.33■□□□□ 0.36
PHGDH-202ENST00000369409 DENND4CQ5VZ89 1909 aa17.32■□□□□ 0.36
PHGDH-202ENST00000369409 NYNRINQ9P2P1 1898 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms