RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 DCAF8L1A6NGE4 600 aa18.64■□□□□ 0.57
UBQLN4-201ENST00000368309 KCNK1O00180 336 aa18.64■□□□□ 0.57
UBQLN4-201ENST00000368309 BPGMP07738 259 aa18.64■□□□□ 0.57
UBQLN4-201ENST00000368309 PSMB4P28070 264 aa18.64■□□□□ 0.57
UBQLN4-201ENST00000368309 SESN3P58005 492 aa18.64■□□□□ 0.57
UBQLN4-201ENST00000368309 OCRLQ01968 901 aa18.64■□□□□ 0.57
UBQLN4-201ENST00000368309 IQSEC1Q6DN90 963 aa18.64■□□□□ 0.57
UBQLN4-201ENST00000368309 RFX8Q6ZV50 586 aa18.64■□□□□ 0.57
UBQLN4-201ENST00000368309 PRDM12Q9H4Q4 367 aa18.64■□□□□ 0.57
UBQLN4-201ENST00000368309 GDAP2Q9NXN4 497 aa18.64■□□□□ 0.57
UBQLN4-201ENST00000368309 ENO1P06733 434 aaKnown RBP18.63■□□□□ 0.57
UBQLN4-201ENST00000368309 F7P08709 466 aaPredicted RBP18.63■□□□□ 0.57
UBQLN4-201ENST00000368309 RPL34P49207 117 aaKnown RBP18.63■□□□□ 0.57
UBQLN4-201ENST00000368309 TAF11Q15544 211 aa18.63■□□□□ 0.57
UBQLN4-201ENST00000368309 C7orf26Q96N11 449 aa18.63■□□□□ 0.57
UBQLN4-201ENST00000368309 AGAP3Q96P47 875 aa18.63■□□□□ 0.57
UBQLN4-201ENST00000368309 HNRNPCL1O60812 293 aaKnown RBP18.63■□□□□ 0.57
UBQLN4-201ENST00000368309 TEX44Q53QW1 395 aa18.63■□□□□ 0.57
UBQLN4-201ENST00000368309 OTUD1Q5VV17 481 aaPredicted RBP18.63■□□□□ 0.57
UBQLN4-201ENST00000368309 TREML1Q86YW5 311 aa18.63■□□□□ 0.57
UBQLN4-201ENST00000368309 FBXO27Q8NI29 283 aa18.63■□□□□ 0.57
UBQLN4-201ENST00000368309 PPP1R14CQ8TAE6 165 aa18.63■□□□□ 0.57
UBQLN4-201ENST00000368309 GTF3C2Q8WUA4 911 aaPredicted RBP18.63■□□□□ 0.57
UBQLN4-201ENST00000368309 ZFP42Q96MM3 310 aa18.63■□□□□ 0.57
UBQLN4-201ENST00000368309 ZNF560Q96MR9 790 aa18.63■□□□□ 0.57
UBQLN4-201ENST00000368309 TUBB6Q9BUF5 446 aa18.63■□□□□ 0.57
UBQLN4-201ENST00000368309 GTF2IRD1Q9UHL9 959 aa18.63■□□□□ 0.57
UBQLN4-201ENST00000368309 MAGED2Q9UNF1 606 aaPredicted RBP18.63■□□□□ 0.57
UBQLN4-201ENST00000368309 ZSWIM8A7E2V4 1837 aa18.63■□□□□ 0.57
UBQLN4-201ENST00000368309 GTF2A2P52657 109 aa18.63■□□□□ 0.57
UBQLN4-201ENST00000368309 RCN2Q14257 317 aa18.63■□□□□ 0.57
UBQLN4-201ENST00000368309 GRB14Q14449 540 aa18.63■□□□□ 0.57
UBQLN4-201ENST00000368309 WSCD1Q658N2 575 aa18.63■□□□□ 0.57
UBQLN4-201ENST00000368309 TRIM68Q6AZZ1 485 aa18.63■□□□□ 0.57
UBQLN4-201ENST00000368309 ARCQ7LC44 396 aa18.63■□□□□ 0.57
UBQLN4-201ENST00000368309 CTU1Q7Z7A3 348 aaKnown RBP18.63■□□□□ 0.57
UBQLN4-201ENST00000368309 CRLF3Q8IUI8 442 aa18.63■□□□□ 0.57
UBQLN4-201ENST00000368309 TRIM42Q8IWZ5 723 aa18.63■□□□□ 0.57
UBQLN4-201ENST00000368309 ARNTL2Q8WYA1 636 aa18.63■□□□□ 0.57
UBQLN4-201ENST00000368309 PGBD4Q96DM1 585 aa18.63■□□□□ 0.57
UBQLN4-201ENST00000368309 TNIP3Q96KP6 325 aa18.63■□□□□ 0.57
UBQLN4-201ENST00000368309 DUSP16Q9BY84 665 aa18.63■□□□□ 0.57
UBQLN4-201ENST00000368309 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.63■□□□□ 0.57
UBQLN4-201ENST00000368309 KCNK4Q9NYG8 393 aa18.63■□□□□ 0.57
UBQLN4-201ENST00000368309 XPO1O14980 1071 aaKnown RBP18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 USP12O75317 370 aa18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 ALDOAP04075 364 aaKnown RBP18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 MLH1P40692 756 aa18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 SERPINB9P50453 376 aa18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 STX3Q13277 289 aa18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 KPNB1Q14974 876 aaKnown RBP18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 UBXN11Q5T124 520 aa18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 RNF169Q8NCN4 708 aa18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 RILPQ96NA2 401 aa18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 LRRC4Q9HBW1 653 aa18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 CLEC11AQ9Y240 323 aa18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 SMIM35A0A1B0GVV1 85 aa18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 FAM72CH0Y354 149 aa18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 LYPLA1O75608 230 aaPredicted RBP18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 ERVK-10P10266 1014 aa18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 YBX3P16989 372 aaKnown RBP eCLIP18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 KCNA4P22459 653 aa18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 PTDSS1P48651 473 aaKnown RBP18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 MAP3K7CLP57077 242 aa18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 RPL10AP62906 217 aaKnown RBP18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 FASTKD1Q53R41 847 aaKnown RBP18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 FAM72AQ5TYM5 149 aa18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 FAM72DQ6L9T8 149 aa18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 PAQR9Q6ZVX9 377 aa18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 PID1Q7Z2X4 250 aa18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 FAM72BQ86X60 149 aa18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 EBF4Q9BQW3 602 aa18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 FAM167BQ9BTA0 163 aa18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 MED10Q9BTT4 135 aa18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 PIGVQ9NUD9 493 aa18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 SYBUQ9NX95 663 aa18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 B2RBV5 119 aa18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 TPP1O14773 563 aa18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 IL1BP01584 269 aa18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 FDFT1P37268 417 aa18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 ERFP50548 548 aa18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 ALDH18A1P54886 795 aaKnown RBP18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 KDSRQ06136 332 aa18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 PPM1JQ5JR12 505 aa18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 LRRC8BQ6P9F7 803 aa18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 ZNF567Q8N184 647 aa18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 WDR60Q8WVS4 1066 aa18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 MORF4L1Q9UBU8 362 aa18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 IPPQ9Y573 584 aa18.62■□□□□ 0.57
UBQLN4-201ENST00000368309 SCNN1AP37088 669 aa18.61■□□□□ 0.57
UBQLN4-201ENST00000368309 SLC8A3P57103 927 aa18.61■□□□□ 0.57
UBQLN4-201ENST00000368309 WASHC5Q12768 1159 aa18.61■□□□□ 0.57
UBQLN4-201ENST00000368309 KRT72Q14CN4 511 aa18.61■□□□□ 0.57
UBQLN4-201ENST00000368309 N4BP2L1Q5TBK1 243 aaPredicted RBP18.61■□□□□ 0.57
UBQLN4-201ENST00000368309 PACS1Q6VY07 963 aa18.61■□□□□ 0.57
UBQLN4-201ENST00000368309 BZW1Q7L1Q6 419 aaKnown RBP18.61■□□□□ 0.57
UBQLN4-201ENST00000368309 PLEKHH3Q7Z736 793 aa18.61■□□□□ 0.57
UBQLN4-201ENST00000368309 XPNPEP3Q9NQH7 507 aa18.61■□□□□ 0.57
UBQLN4-201ENST00000368309 HACD1B0YJ81 288 aa18.61■□□□□ 0.57
UBQLN4-201ENST00000368309 H3BRJ5 948 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms