RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 SERPINB11Q96P15 392 aa13.21□□□□□ -0.3
PTPRK-207ENST00000368226 RGS18Q9NS28 235 aa13.21□□□□□ -0.3
PTPRK-207ENST00000368226 KDM4FA0A1W2PPD8 638 aa13.21□□□□□ -0.3
PTPRK-207ENST00000368226 RBAK-RBAKDNI3L0D1 243 aa13.21□□□□□ -0.3
PTPRK-207ENST00000368226 DDX3XO00571 662 aaKnown RBP eCLIP13.21□□□□□ -0.38e-10■□□□□ 11.1
PTPRK-207ENST00000368226 KRT16P08779 473 aa13.21□□□□□ -0.3
PTPRK-207ENST00000368226 GSTM1P09488 218 aa13.21□□□□□ -0.3
PTPRK-207ENST00000368226 HPGDP15428 266 aa13.21□□□□□ -0.3
PTPRK-207ENST00000368226 AASDHQ4L235 1098 aaPredicted RBP13.21□□□□□ -0.3
PTPRK-207ENST00000368226 PLEKHM3Q6ZWE6 761 aa13.21□□□□□ -0.3
PTPRK-207ENST00000368226 SLC26A11Q86WA9 606 aa13.21□□□□□ -0.3
PTPRK-207ENST00000368226 PIK3R5Q8WYR1 880 aa13.21□□□□□ -0.3
PTPRK-207ENST00000368226 THAP11Q96EK4 314 aa13.21□□□□□ -0.3
PTPRK-207ENST00000368226 FRMD8Q9BZ67 464 aaPredicted RBP13.21□□□□□ -0.3
PTPRK-207ENST00000368226 PORCNQ9H237 461 aa13.21□□□□□ -0.3
PTPRK-207ENST00000368226 ADGRB1O14514 1584 aa13.2□□□□□ -0.3
PTPRK-207ENST00000368226 CCDC159P0C7I6 412 aa13.2□□□□□ -0.3
PTPRK-207ENST00000368226 ATP6V1B2P21281 511 aa13.2□□□□□ -0.3
PTPRK-207ENST00000368226 SRLQ86TD4 932 aa13.2□□□□□ -0.3
PTPRK-207ENST00000368226 ELOVL4Q9GZR5 314 aa13.2□□□□□ -0.3
PTPRK-207ENST00000368226 SH3BP4Q9P0V3 963 aa13.2□□□□□ -0.3
PTPRK-207ENST00000368226 FER1L4A9Z1Z3 1794 aa13.2□□□□□ -0.3
PTPRK-207ENST00000368226 CLDN5O00501 218 aa13.2□□□□□ -0.3
PTPRK-207ENST00000368226 RPL21P46778 160 aaKnown RBP13.2□□□□□ -0.3
PTPRK-207ENST00000368226 ZC3H12AQ5D1E8 599 aaKnown RBP13.2□□□□□ -0.3
PTPRK-207ENST00000368226 ZCCHC23Q6ZST2 131 aa13.2□□□□□ -0.3
PTPRK-207ENST00000368226 OLFM3Q96PB7 478 aa13.2□□□□□ -0.3
PTPRK-207ENST00000368226 PPP1R10Q96QC0 940 aaKnown RBP13.2□□□□□ -0.3
PTPRK-207ENST00000368226 ASB7Q9H672 318 aa13.2□□□□□ -0.3
PTPRK-207ENST00000368226 BPIFA1Q9NP55 256 aa13.2□□□□□ -0.3
PTPRK-207ENST00000368226 SNX13Q9Y5W8 968 aa13.2□□□□□ -0.3
PTPRK-207ENST00000368226 RBL1P28749 1068 aa13.2□□□□□ -0.3
PTPRK-207ENST00000368226 CTNNB1P35222 781 aa13.2□□□□□ -0.3
PTPRK-207ENST00000368226 UGCGQ16739 394 aa13.2□□□□□ -0.3
PTPRK-207ENST00000368226 RETSATQ6NUM9 610 aa13.2□□□□□ -0.3
PTPRK-207ENST00000368226 KCNT2Q6UVM3 1135 aa13.2□□□□□ -0.3
PTPRK-207ENST00000368226 LRRN4CLQ8ND94 238 aa13.2□□□□□ -0.3
PTPRK-207ENST00000368226 TMBIM4Q9HC24 238 aa13.2□□□□□ -0.3
PTPRK-207ENST00000368226 MIEF1Q9NQG6 463 aa13.2□□□□□ -0.3
PTPRK-207ENST00000368226 DDX28Q9NUL7 540 aaKnown RBP13.2□□□□□ -0.3
PTPRK-207ENST00000368226 ATP9AO75110 1047 aa13.2□□□□□ -0.3
PTPRK-207ENST00000368226 MAPTP10636 758 aaKnown RBP13.2□□□□□ -0.3
PTPRK-207ENST00000368226 ELNP15502 786 aa13.2□□□□□ -0.3
PTPRK-207ENST00000368226 PTPN1P18031 435 aaKnown RBP13.2□□□□□ -0.3
PTPRK-207ENST00000368226 TRPC1P48995 793 aa13.2□□□□□ -0.3
PTPRK-207ENST00000368226 ANKS6Q68DC2 871 aa13.2□□□□□ -0.3
PTPRK-207ENST00000368226 PDPK2PQ6A1A2 396 aa13.2□□□□□ -0.3
PTPRK-207ENST00000368226 WDR59Q6PJI9 974 aa13.2□□□□□ -0.3
PTPRK-207ENST00000368226 DENND1CQ8IV53 801 aa13.2□□□□□ -0.3
PTPRK-207ENST00000368226 TBC1D3BA6NDS4 549 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 RARAP10276 462 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 PRKAR2AP13861 404 aaKnown RBP13.19□□□□□ -0.3
PTPRK-207ENST00000368226 GSSP48637 474 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 SP3Q02447 781 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 FAM180AQ6UWF9 173 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 MTSS1LQ765P7 747 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 TNIP2Q8NFZ5 429 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 MAGEB18Q96M61 343 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 MRPL9Q9BYD2 267 aaKnown RBP13.19□□□□□ -0.3
PTPRK-207ENST00000368226 RMND5AQ9H871 391 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 POPDC2Q9HBU9 364 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 MRPL17Q9NRX2 175 aaKnown RBP13.19□□□□□ -0.3
PTPRK-207ENST00000368226 RARGP13631 454 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 PSMA4P25789 261 aaKnown RBP13.19□□□□□ -0.3
PTPRK-207ENST00000368226 CLK2P49760 499 aaKnown RBP13.19□□□□□ -0.3
PTPRK-207ENST00000368226 MRPS6P82932 125 aaKnown RBP13.19□□□□□ -0.3
PTPRK-207ENST00000368226 CYLC2Q14093 348 aaPredicted RBP13.19□□□□□ -0.3
PTPRK-207ENST00000368226 DNAJC14Q6Y2X3 702 aaPredicted RBP13.19□□□□□ -0.3
PTPRK-207ENST00000368226 FAM183BPQ6ZVS7 135 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 HDAC7Q8WUI4 952 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 TMEM159Q96B96 161 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 SPACA7Q96KW9 195 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 CCDC134Q9H6E4 229 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 MEIS2O14770 477 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 BCL2L1Q07817 233 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 MCL1Q07820 350 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 CDH17Q12864 832 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 ITGA9Q13797 1035 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 RCN1Q15293 331 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 BBS7Q8IWZ6 715 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 ZNF786Q8N393 782 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 FAR2Q96K12 515 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 CDK5RAP1Q96SZ6 601 aaKnown RBP13.19□□□□□ -0.3
PTPRK-207ENST00000368226 CCT7Q99832 543 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 NMRK1Q9NWW6 199 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 MARCH2Q9P0N8 246 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 A0A0U1RQJ8 604 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 XYLBO75191 536 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 ALBP02768 609 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 AXLP30530 894 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 CD151P48509 253 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 MGAT5Q09328 741 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 ZNF268Q14587 947 aaPredicted RBP13.19□□□□□ -0.3
PTPRK-207ENST00000368226 DEFB115Q30KQ5 88 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 CAPRIN2Q6IMN6 1127 aaKnown RBP13.19□□□□□ -0.3
PTPRK-207ENST00000368226 CHST7Q9NS84 486 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 IMPAD1Q9NX62 359 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 NAALADL1Q9UQQ1 740 aa13.19□□□□□ -0.3
PTPRK-207ENST00000368226 PECAM1P16284 738 aaPredicted RBP13.19□□□□□ -0.3
PTPRK-207ENST00000368226 POLR2EP19388 210 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms