RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 TM6SF2Q9BZW4 377 aa11.03□□□□□ -0.64
PTPRK-205ENST00000368213 DERAQ9Y315 318 aa11.03□□□□□ -0.64
PTPRK-205ENST00000368213 ZNF839A8K0R7 811 aa11.02□□□□□ -0.64
PTPRK-205ENST00000368213 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.02□□□□□ -0.64
PTPRK-205ENST00000368213 GYG2O15488 501 aa11.02□□□□□ -0.64
PTPRK-205ENST00000368213 TBC1D4O60343 1298 aa11.02□□□□□ -0.64
PTPRK-205ENST00000368213 LMNAP02545 664 aaKnown RBP11.02□□□□□ -0.64
PTPRK-205ENST00000368213 MAPK8P45983 427 aa11.02□□□□□ -0.64
PTPRK-205ENST00000368213 VEGFBP49765 207 aa11.02□□□□□ -0.64
PTPRK-205ENST00000368213 PEX6Q13608 980 aa11.02□□□□□ -0.64
PTPRK-205ENST00000368213 ATG4AQ8WYN0 398 aa11.02□□□□□ -0.64
PTPRK-205ENST00000368213 LRRC1Q9BTT6 524 aa11.02□□□□□ -0.64
PTPRK-205ENST00000368213 RASSF4Q9H2L5 321 aa11.02□□□□□ -0.64
PTPRK-205ENST00000368213 ATP13A3Q9H7F0 1226 aa11.02□□□□□ -0.64
PTPRK-205ENST00000368213 PPCSQ9HAB8 311 aa11.02□□□□□ -0.64
PTPRK-205ENST00000368213 OR12D3Q9UGF7 316 aa11.02□□□□□ -0.64
PTPRK-205ENST00000368213 ZNHIT2Q9UHR6 403 aa11.02□□□□□ -0.64
PTPRK-205ENST00000368213 GRID1Q9ULK0 1009 aa11.02□□□□□ -0.64
PTPRK-205ENST00000368213 HPSEQ9Y251 543 aa11.02□□□□□ -0.64
PTPRK-205ENST00000368213 SYCE1LA8MT33 242 aa11.02□□□□□ -0.65
PTPRK-205ENST00000368213 CLDN5O00501 218 aa11.02□□□□□ -0.65
PTPRK-205ENST00000368213 SOCS7O14512 581 aa11.02□□□□□ -0.65
PTPRK-205ENST00000368213 METTL3Q86U44 580 aaKnown RBP11.02□□□□□ -0.65
PTPRK-205ENST00000368213 EPC1Q9H2F5 836 aa11.02□□□□□ -0.65
PTPRK-205ENST00000368213 GOLGA2P5Q9HBQ8 144 aa11.02□□□□□ -0.65
PTPRK-205ENST00000368213 RGS18Q9NS28 235 aa11.02□□□□□ -0.65
PTPRK-205ENST00000368213 EIF4E1BA6NMX2 242 aaKnown RBP11.02□□□□□ -0.65
PTPRK-205ENST00000368213 CHUKO15111 745 aa11.02□□□□□ -0.65
PTPRK-205ENST00000368213 EOMESO95936 686 aa11.02□□□□□ -0.65
PTPRK-205ENST00000368213 STMN1P16949 149 aa11.02□□□□□ -0.65
PTPRK-205ENST00000368213 CENPAP49450 140 aa11.02□□□□□ -0.65
PTPRK-205ENST00000368213 LONRF1Q17RB8 773 aa11.02□□□□□ -0.65
PTPRK-205ENST00000368213 TEDDM1Q5T9Z0 273 aa11.02□□□□□ -0.65
PTPRK-205ENST00000368213 OR4Q2P0C623 313 aa11.02□□□□□ -0.65
PTPRK-205ENST00000368213 MLNP12872 115 aa11.02□□□□□ -0.65
PTPRK-205ENST00000368213 WASP42768 502 aa11.02□□□□□ -0.65
PTPRK-205ENST00000368213 PPP2R2AP63151 447 aa11.02□□□□□ -0.65
PTPRK-205ENST00000368213 HIC1Q14526 733 aa11.02□□□□□ -0.65
PTPRK-205ENST00000368213 CNGA2Q16280 664 aa11.02□□□□□ -0.65
PTPRK-205ENST00000368213 TRIM60Q495X7 471 aa11.02□□□□□ -0.65
PTPRK-205ENST00000368213 FAM35AQ86V20 835 aa11.02□□□□□ -0.65
PTPRK-205ENST00000368213 C4orf33Q8N1A6 199 aa11.02□□□□□ -0.65
PTPRK-205ENST00000368213 ANKRD52Q8NB46 1076 aa11.02□□□□□ -0.65
PTPRK-205ENST00000368213 VMP1Q96GC9 406 aa11.02□□□□□ -0.65
PTPRK-205ENST00000368213 GBP5Q96PP8 586 aa11.02□□□□□ -0.65
PTPRK-205ENST00000368213 ZYG11BQ9C0D3 744 aa11.02□□□□□ -0.65
PTPRK-205ENST00000368213 FAM153AQ9UHL3 310 aa11.02□□□□□ -0.65
PTPRK-205ENST00000368213 TRHDEQ9UKU6 1024 aa11.02□□□□□ -0.65
PTPRK-205ENST00000368213 PLAGL2Q9UPG8 496 aa11.02□□□□□ -0.65
PTPRK-205ENST00000368213 SMG5Q9UPR3 1016 aaKnown RBP11.02□□□□□ -0.65
PTPRK-205ENST00000368213 ABHD14A-ACY1A0A1B0GW23 586 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 RASSF9O75901 435 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 ICAM3P32942 547 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 TC2NQ8N9U0 490 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 ATAD1Q8NBU5 361 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.01□□□□□ -0.65
PTPRK-205ENST00000368213 NAF1Q96HR8 494 aaKnown RBP11.01□□□□□ -0.65
PTPRK-205ENST00000368213 WWP1Q9H0M0 922 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 CARD9Q9H257 536 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 TUBGCP4Q9UGJ1 667 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 SMIM28A0A1B0GU29 152 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 CCDC22O60826 627 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 CDH16O75309 829 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 SUPT7LO94864 414 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 ERVK-21P61565 698 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 AAK1Q2M2I8 961 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 ZFP42Q96MM3 310 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 ZFP14Q9HCL3 533 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 DUS2Q9NX74 493 aaKnown RBP11.01□□□□□ -0.65
PTPRK-205ENST00000368213 CDYLQ9Y232 598 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 EIF3LQ9Y262 564 aaKnown RBP11.01□□□□□ -0.65
PTPRK-205ENST00000368213 TIMM44O43615 452 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 ADRB2P07550 413 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 CLCN6P51797 869 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 GRSF1Q12849 480 aaKnown RBP eCLIP11.01□□□□□ -0.65
PTPRK-205ENST00000368213 CDH17Q12864 832 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 CACHD1Q5VU97 1274 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 RAD9BQ6WBX8 426 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 NLRP9Q7RTR0 991 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 KREMEN2Q8NCW0 462 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 PANX3Q96QZ0 392 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 NDEL1Q9GZM8 345 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 KIAA1522Q9P206 1035 aaPredicted RBP11.01□□□□□ -0.65
PTPRK-205ENST00000368213 CTNNAL1Q9UBT7 734 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 FNTAP49354 379 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 SULT2A1Q06520 285 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 TMEM259Q4ZIN3 620 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 SPATA20Q8TB22 786 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 ETNPPLQ8TBG4 499 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 VCPIP1Q96JH7 1222 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 TMEM121Q9BTD3 319 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 NAT9Q9BTE0 207 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 ANGPTL2Q9UKU9 493 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 RUVBL2Q9Y230 463 aaKnown RBP11.01□□□□□ -0.65
PTPRK-205ENST00000368213 GNG14A0A1W2PPG7 69 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 RFC1P35251 1148 aaPredicted RBP11.01□□□□□ -0.65
PTPRK-205ENST00000368213 CUL3Q13618 768 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 GRAMD1BQ3KR37 738 aa11.01□□□□□ -0.65
PTPRK-205ENST00000368213 BEND6Q5SZJ8 279 aaPredicted RBP11.01□□□□□ -0.65
PTPRK-205ENST00000368213 ZNF618Q5T7W0 954 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms