RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 NT5C3BQ969T7 300 aa11.25□□□□□ -0.61
H3F3A-202ENST00000366814 CSPG4P5Q96PW8 444 aa11.25□□□□□ -0.61
H3F3A-202ENST00000366814 KCTD15Q96SI1 283 aaPredicted RBP11.25□□□□□ -0.61
H3F3A-202ENST00000366814 ULBP1Q9BZM6 244 aa11.25□□□□□ -0.61
H3F3A-202ENST00000366814 C10orf88Q9H8K7 445 aa11.25□□□□□ -0.61
H3F3A-202ENST00000366814 ACTL7BQ9Y614 415 aa11.25□□□□□ -0.61
H3F3A-202ENST00000366814 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.25□□□□□ -0.61
H3F3A-202ENST00000366814 CHD7Q9P2D1 2997 aa11.25□□□□□ -0.61
H3F3A-202ENST00000366814 SYNJ2BP-COX16A0A087WUM0 186 aa11.25□□□□□ -0.61
H3F3A-202ENST00000366814 M0QZQ0 153 aa11.25□□□□□ -0.61
H3F3A-202ENST00000366814 INPPL1O15357 1258 aa11.25□□□□□ -0.61
H3F3A-202ENST00000366814 TRAPPC3O43617 180 aa11.25□□□□□ -0.61
H3F3A-202ENST00000366814 SPAG6O75602 509 aa11.25□□□□□ -0.61
H3F3A-202ENST00000366814 F9P00740 461 aa11.25□□□□□ -0.61
H3F3A-202ENST00000366814 TYMPP19971 482 aa11.25□□□□□ -0.61
H3F3A-202ENST00000366814 CCT5P48643 541 aa11.25□□□□□ -0.61
H3F3A-202ENST00000366814 ZNF135P52742 658 aaPredicted RBP11.25□□□□□ -0.61
H3F3A-202ENST00000366814 NME3Q13232 169 aa11.25□□□□□ -0.61
H3F3A-202ENST00000366814 GPM6BQ13491 265 aa11.25□□□□□ -0.61
H3F3A-202ENST00000366814 KLHL38Q2WGJ6 581 aa11.25□□□□□ -0.61
H3F3A-202ENST00000366814 PAN2Q504Q3 1202 aaKnown RBP11.25□□□□□ -0.61
H3F3A-202ENST00000366814 RAB41Q5JT25 222 aa11.25□□□□□ -0.61
H3F3A-202ENST00000366814 OVOS1Q6IE37 1185 aa11.25□□□□□ -0.61
H3F3A-202ENST00000366814 CCDC13Q8IYE1 715 aa11.25□□□□□ -0.61
H3F3A-202ENST00000366814 DYDC1Q8WWB3 177 aa11.25□□□□□ -0.61
H3F3A-202ENST00000366814 RSPH1Q8WYR4 309 aa11.25□□□□□ -0.61
H3F3A-202ENST00000366814 IRGQQ8WZA9 623 aa11.25□□□□□ -0.61
H3F3A-202ENST00000366814 MYLPFQ96A32 169 aa11.25□□□□□ -0.61
H3F3A-202ENST00000366814 ZNF689Q96CS4 500 aaPredicted RBP11.25□□□□□ -0.61
H3F3A-202ENST00000366814 XPO6Q96QU8 1125 aaKnown RBP11.25□□□□□ -0.61
H3F3A-202ENST00000366814 SMOQ99835 787 aa11.25□□□□□ -0.61
H3F3A-202ENST00000366814 DMAP1Q9NPF5 467 aaPredicted RBP11.25□□□□□ -0.61
H3F3A-202ENST00000366814 PRDM6Q9NQX0 595 aa11.25□□□□□ -0.61
H3F3A-202ENST00000366814 RAB6BQ9NRW1 208 aa11.25□□□□□ -0.61
H3F3A-202ENST00000366814 COX16Q9P0S2 106 aa11.25□□□□□ -0.61
H3F3A-202ENST00000366814 SENP1Q9P0U3 644 aa11.25□□□□□ -0.61
H3F3A-202ENST00000366814 KANSL3Q9P2N6 904 aa11.25□□□□□ -0.61
H3F3A-202ENST00000366814 FETUBQ9UGM5 382 aa11.25□□□□□ -0.61
H3F3A-202ENST00000366814 SLC24A2Q9UI40 661 aa11.25□□□□□ -0.61
H3F3A-202ENST00000366814 TSC2P49815 1807 aa11.24□□□□□ -0.61
H3F3A-202ENST00000366814 SF3B1O75533 1304 aaKnown RBP eCLIP11.24□□□□□ -0.611e-6■■■■■ 32.9
H3F3A-202ENST00000366814 C9IYK1 514 aa11.24□□□□□ -0.61
H3F3A-202ENST00000366814 E7ESA3 106 aa11.24□□□□□ -0.61
H3F3A-202ENST00000366814 LPXNO60711 386 aa11.24□□□□□ -0.61
H3F3A-202ENST00000366814 LTFP02788 710 aa11.24□□□□□ -0.61
H3F3A-202ENST00000366814 RBL1P28749 1068 aa11.24□□□□□ -0.61
H3F3A-202ENST00000366814 CTNNB1P35222 781 aa11.24□□□□□ -0.61
H3F3A-202ENST00000366814 NDUFV1P49821 464 aa11.24□□□□□ -0.61
H3F3A-202ENST00000366814 ATXN1P54253 815 aaKnown RBP11.24□□□□□ -0.61
H3F3A-202ENST00000366814 CCDC142Q17RM4 750 aa11.24□□□□□ -0.61
H3F3A-202ENST00000366814 BBS9Q3SYG4 887 aa11.24□□□□□ -0.61
H3F3A-202ENST00000366814 CCDC38Q502W7 563 aa11.24□□□□□ -0.61
H3F3A-202ENST00000366814 C4orf50Q6ZRC1 276 aa11.24□□□□□ -0.61
H3F3A-202ENST00000366814 TADA2BQ86TJ2 420 aa11.24□□□□□ -0.61
H3F3A-202ENST00000366814 EXOC3L1Q86VI1 746 aa11.24□□□□□ -0.61
H3F3A-202ENST00000366814 VPS52Q8N1B4 723 aa11.24□□□□□ -0.61
H3F3A-202ENST00000366814 SLC7A14Q8TBB6 771 aa11.24□□□□□ -0.61
H3F3A-202ENST00000366814 TFB1MQ8WVM0 346 aaKnown RBP11.24□□□□□ -0.61
H3F3A-202ENST00000366814 NTAN1Q96AB6 310 aa11.24□□□□□ -0.61
H3F3A-202ENST00000366814 SUSD3Q96L08 255 aa11.24□□□□□ -0.61
H3F3A-202ENST00000366814 QKIQ96PU8 341 aaKnown RBP eCLIP11.24□□□□□ -0.61
H3F3A-202ENST00000366814 FAM193BQ96PV7 902 aaPredicted RBP11.24□□□□□ -0.61
H3F3A-202ENST00000366814 CCT8L2Q96SF2 557 aa11.24□□□□□ -0.61
H3F3A-202ENST00000366814 PAAF1Q9BRP4 392 aa11.24□□□□□ -0.61
H3F3A-202ENST00000366814 ZMYND15Q9H091 742 aa11.24□□□□□ -0.61
H3F3A-202ENST00000366814 USP29Q9HBJ7 922 aa11.24□□□□□ -0.61
H3F3A-202ENST00000366814 CSNK1G1Q9HCP0 422 aa11.24□□□□□ -0.61
H3F3A-202ENST00000366814 PNPLA8Q9NP80 782 aa11.24□□□□□ -0.61
H3F3A-202ENST00000366814 LMCD1Q9NZU5 365 aa11.24□□□□□ -0.61
H3F3A-202ENST00000366814 NAALADL1Q9UQQ1 740 aa11.24□□□□□ -0.61
H3F3A-202ENST00000366814 RWDD3Q9Y3V2 267 aa11.24□□□□□ -0.61
H3F3A-202ENST00000366814 POC1B-GALNT4F8VUJ3 575 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 H3BNC9 293 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 I3L4J1 428 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 EEF2KO00418 725 aaKnown RBP11.23□□□□□ -0.61
H3F3A-202ENST00000366814 PPP1R12AO14974 1030 aaPredicted RBP11.23□□□□□ -0.61
H3F3A-202ENST00000366814 USP17L7P0C7H9 530 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 NCAM1P13591 858 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 GOT1P17174 413 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 BMPR1AP36894 532 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 BRCC3P46736 316 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 GATMP50440 423 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 SARNPP82979 210 aaKnown RBP11.23□□□□□ -0.61
H3F3A-202ENST00000366814 YWHAHQ04917 246 aaPredicted RBP11.23□□□□□ -0.61
H3F3A-202ENST00000366814 KCNJ11Q14654 390 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 RASA2Q15283 850 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 TMED2Q15363 201 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 ANKRD22Q5VYY1 191 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 FAM171BQ6P995 826 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 ARHGEF18Q6ZSZ5 1173 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 CPLX4Q7Z7G2 160 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 ZNF598Q86UK7 904 aaKnown RBP11.23□□□□□ -0.61
H3F3A-202ENST00000366814 SPATA2LQ8IUW3 424 aaPredicted RBP11.23□□□□□ -0.61
H3F3A-202ENST00000366814 ANKMY2Q8IV38 441 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 CMTR2Q8IYT2 770 aaKnown RBP11.23□□□□□ -0.61
H3F3A-202ENST00000366814 CRIPAKQ8N1N5 446 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 SCML4Q8N228 414 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 TAB3Q8N5C8 712 aaPredicted RBP11.23□□□□□ -0.61
H3F3A-202ENST00000366814 FBXO36Q8NEA4 188 aa11.23□□□□□ -0.61
H3F3A-202ENST00000366814 MDM1Q8TC05 714 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms