RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 UGT1A8Q9HAW9 530 aa14.26□□□□□ -0.13
COL6A1-201ENST00000361866 TRDMT1O14717 391 aaKnown RBP14.25□□□□□ -0.13
COL6A1-201ENST00000361866 TM7SF2O76062 418 aa14.25□□□□□ -0.13
COL6A1-201ENST00000361866 TNFAIP8O95379 198 aa14.25□□□□□ -0.13
COL6A1-201ENST00000361866 SERPINA6P08185 405 aa14.25□□□□□ -0.13
COL6A1-201ENST00000361866 HADHAP40939 763 aa14.25□□□□□ -0.13
COL6A1-201ENST00000361866 IREB2P48200 963 aaKnown RBP14.25□□□□□ -0.13
COL6A1-201ENST00000361866 ABCE1P61221 599 aaKnown RBP14.25□□□□□ -0.13
COL6A1-201ENST00000361866 CWF19L1Q69YN2 538 aaKnown RBP14.25□□□□□ -0.13
COL6A1-201ENST00000361866 NAPEPLDQ6IQ20 393 aa14.25□□□□□ -0.13
COL6A1-201ENST00000361866 TRMT10BQ6PF06 316 aaKnown RBP14.25□□□□□ -0.13
COL6A1-201ENST00000361866 FAM183BPQ6ZVS7 135 aa14.25□□□□□ -0.13
COL6A1-201ENST00000361866 SLC16A10Q8TF71 515 aa14.25□□□□□ -0.13
COL6A1-201ENST00000361866 DDI1Q8WTU0 396 aa14.25□□□□□ -0.13
COL6A1-201ENST00000361866 B3GNT5Q9BYG0 378 aa14.25□□□□□ -0.13
COL6A1-201ENST00000361866 SP110Q9HB58 689 aa14.25□□□□□ -0.13
COL6A1-201ENST00000361866 ERAP1Q9NZ08 941 aa14.25□□□□□ -0.13
COL6A1-201ENST00000361866 MYH7BA7E2Y1 1941 aa14.25□□□□□ -0.13
COL6A1-201ENST00000361866 VAPBO95292 243 aa14.25□□□□□ -0.13
COL6A1-201ENST00000361866 C4BPAP04003 597 aaKnown RBP14.25□□□□□ -0.13
COL6A1-201ENST00000361866 COX4I1P13073 169 aa14.25□□□□□ -0.13
COL6A1-201ENST00000361866 ZNF23P17027 643 aa14.25□□□□□ -0.13
COL6A1-201ENST00000361866 CNTFP26441 200 aa14.25□□□□□ -0.13
COL6A1-201ENST00000361866 PEX2P28328 305 aa14.25□□□□□ -0.13
COL6A1-201ENST00000361866 GMPSP49915 693 aaPredicted RBP14.25□□□□□ -0.13
COL6A1-201ENST00000361866 LIN52Q52LA3 116 aa14.25□□□□□ -0.13
COL6A1-201ENST00000361866 OTUD3Q5T2D3 398 aaPredicted RBP14.25□□□□□ -0.13
COL6A1-201ENST00000361866 ANGPTL8Q6UXH0 198 aa14.25□□□□□ -0.13
COL6A1-201ENST00000361866 UNC5AQ6ZN44 842 aa14.25□□□□□ -0.13
COL6A1-201ENST00000361866 TMC7Q7Z402 723 aa14.25□□□□□ -0.13
COL6A1-201ENST00000361866 GIPC2Q8TF65 315 aa14.25□□□□□ -0.13
COL6A1-201ENST00000361866 RMDN1Q96DB5 314 aa14.25□□□□□ -0.13
COL6A1-201ENST00000361866 ZNF333Q96JL9 665 aa14.25□□□□□ -0.13
COL6A1-201ENST00000361866 EBNA1BP2Q99848 306 aaKnown RBP14.25□□□□□ -0.13
COL6A1-201ENST00000361866 SIKE1Q9BRV8 207 aa14.25□□□□□ -0.13
COL6A1-201ENST00000361866 HERPUD2Q9BSE4 406 aa14.25□□□□□ -0.13
COL6A1-201ENST00000361866 CAB39LQ9H9S4 337 aa14.25□□□□□ -0.13
COL6A1-201ENST00000361866 BPGMP07738 259 aa14.25□□□□□ -0.13
COL6A1-201ENST00000361866 NFKBIAP25963 317 aa14.25□□□□□ -0.13
COL6A1-201ENST00000361866 ETFBP38117 255 aa14.25□□□□□ -0.13
COL6A1-201ENST00000361866 TGFB2P61812 414 aa14.25□□□□□ -0.13
COL6A1-201ENST00000361866 GBE1Q04446 702 aa14.25□□□□□ -0.13
COL6A1-201ENST00000361866 MSS51Q4VC12 460 aa14.25□□□□□ -0.13
COL6A1-201ENST00000361866 PAN2Q504Q3 1202 aaKnown RBP14.25□□□□□ -0.13
COL6A1-201ENST00000361866 ZPBP2Q6X784 338 aa14.25□□□□□ -0.13
COL6A1-201ENST00000361866 ANKS1BQ7Z6G8 1248 aa14.25□□□□□ -0.13
COL6A1-201ENST00000361866 AMIGO2Q86SJ2 522 aa14.25□□□□□ -0.13
COL6A1-201ENST00000361866 EDEM1Q92611 657 aa14.25□□□□□ -0.13
COL6A1-201ENST00000361866 TRPC7Q9HCX4 862 aa14.25□□□□□ -0.13
COL6A1-201ENST00000361866 ZNF229Q9UJW7 825 aa14.25□□□□□ -0.13
COL6A1-201ENST00000361866 NR5A2O00482 541 aa14.24□□□□□ -0.13
COL6A1-201ENST00000361866 LIN7AO14910 233 aaPredicted RBP14.24□□□□□ -0.13
COL6A1-201ENST00000361866 HMBSP08397 361 aa14.24□□□□□ -0.13
COL6A1-201ENST00000361866 CRY2Q49AN0 593 aa14.24□□□□□ -0.13
COL6A1-201ENST00000361866 BTBD8Q5XKL5 378 aa14.24□□□□□ -0.13
COL6A1-201ENST00000361866 ZNF516Q92618 1163 aa14.24□□□□□ -0.13
COL6A1-201ENST00000361866 SLC10A4Q96EP9 437 aa14.24□□□□□ -0.13
COL6A1-201ENST00000361866 GPR88Q9GZN0 384 aa14.24□□□□□ -0.13
COL6A1-201ENST00000361866 PIDD1Q9HB75 910 aa14.24□□□□□ -0.13
COL6A1-201ENST00000361866 NCKIPSDQ9NZQ3 722 aa14.24□□□□□ -0.13
COL6A1-201ENST00000361866 RPL26L1Q9UNX3 145 aaKnown RBP14.24□□□□□ -0.13
COL6A1-201ENST00000361866 HBS1LQ9Y450 684 aaKnown RBP14.24□□□□□ -0.13
COL6A1-201ENST00000361866 C19orf81C9J6K1 198 aa14.24□□□□□ -0.13
COL6A1-201ENST00000361866 ADARP55265 1226 aaKnown RBP14.24□□□□□ -0.13
COL6A1-201ENST00000361866 ACBD5Q5T8D3 534 aaPredicted RBP14.24□□□□□ -0.13
COL6A1-201ENST00000361866 BANPQ8N9N5 519 aa14.24□□□□□ -0.13
COL6A1-201ENST00000361866 RCN3Q96D15 328 aa14.24□□□□□ -0.13
COL6A1-201ENST00000361866 WDR41Q9HAD4 459 aa14.24□□□□□ -0.13
COL6A1-201ENST00000361866 DMAP1Q9NPF5 467 aaPredicted RBP14.24□□□□□ -0.13
COL6A1-201ENST00000361866 SLC7A8Q9UHI5 535 aa14.24□□□□□ -0.13
COL6A1-201ENST00000361866 TIMM13Q9Y5L4 95 aaPredicted RBP14.24□□□□□ -0.13
COL6A1-201ENST00000361866 SNCAIPQ9Y6H5 919 aa14.24□□□□□ -0.13
COL6A1-201ENST00000361866 ATP6AP2A0A1C7CYW4 349 aa14.24□□□□□ -0.13
COL6A1-201ENST00000361866 KDM1AO60341 852 aa14.24□□□□□ -0.13
COL6A1-201ENST00000361866 ATP6AP2O75787 350 aa14.24□□□□□ -0.13
COL6A1-201ENST00000361866 TSPAN8P19075 237 aa14.24□□□□□ -0.13
COL6A1-201ENST00000361866 ZNF143P52747 638 aaPredicted RBP14.24□□□□□ -0.13
COL6A1-201ENST00000361866 JAG1P78504 1218 aa14.24□□□□□ -0.13
COL6A1-201ENST00000361866 ATP1A4Q13733 1029 aa14.24□□□□□ -0.13
COL6A1-201ENST00000361866 NEDD8Q15843 81 aa14.24□□□□□ -0.13
COL6A1-201ENST00000361866 SH3PXD2AQ5TCZ1 1133 aa14.24□□□□□ -0.13
COL6A1-201ENST00000361866 STYK1Q6J9G0 422 aa14.24□□□□□ -0.13
COL6A1-201ENST00000361866 FRA10AC1Q70Z53 315 aa14.24□□□□□ -0.13
COL6A1-201ENST00000361866 KCNMB4Q86W47 210 aa14.24□□□□□ -0.13
COL6A1-201ENST00000361866 DEFB106AQ8N104 65 aa14.24□□□□□ -0.13
COL6A1-201ENST00000361866 BORCS6Q96GS4 357 aa14.24□□□□□ -0.13
COL6A1-201ENST00000361866 FAM193BQ96PV7 902 aaPredicted RBP14.24□□□□□ -0.13
COL6A1-201ENST00000361866 SEPHS2Q99611 448 aa14.24□□□□□ -0.13
COL6A1-201ENST00000361866 EBF3Q9H4W6 596 aa14.24□□□□□ -0.13
COL6A1-201ENST00000361866 HACD3Q9P035 362 aa14.24□□□□□ -0.13
COL6A1-201ENST00000361866 PEX10O60683 326 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 ERBB2P04626 1255 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 ITGA2BP08514 1039 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 CCNB1P14635 433 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 VAV1P15498 845 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 PCYT1AP49585 367 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 GSTA3Q16772 222 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 LMO3Q8TAP4 145 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 WDCPQ9H6R7 721 aa14.23□□□□□ -0.13
COL6A1-201ENST00000361866 NCF1BA6NI72 391 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms