RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 ANKRD23Q86SG2 305 aa19.03■□□□□ 0.64
CLIP2-202ENST00000361545 CD99L2Q8TCZ2 262 aa19.03■□□□□ 0.64
CLIP2-202ENST00000361545 SUSD6Q92537 303 aa19.03■□□□□ 0.64
CLIP2-202ENST00000361545 MYLPFQ96A32 169 aa19.03■□□□□ 0.64
CLIP2-202ENST00000361545 ASAH2Q9NR71 780 aa19.03■□□□□ 0.64
CLIP2-202ENST00000361545 SPATA31C1P0DKV0 1188 aa19.03■□□□□ 0.64
CLIP2-202ENST00000361545 RARAP10276 462 aa19.03■□□□□ 0.64
CLIP2-202ENST00000361545 RBM23Q86U06 439 aaKnown RBP19.03■□□□□ 0.64
CLIP2-202ENST00000361545 PIGZQ86VD9 579 aa19.03■□□□□ 0.64
CLIP2-202ENST00000361545 LRRC34Q8IZ02 419 aa19.03■□□□□ 0.64
CLIP2-202ENST00000361545 PPTC7Q8NI37 304 aa19.03■□□□□ 0.64
CLIP2-202ENST00000361545 TMEM159Q96B96 161 aa19.03■□□□□ 0.64
CLIP2-202ENST00000361545 AVENQ9NQS1 362 aaPredicted RBP19.03■□□□□ 0.64
CLIP2-202ENST00000361545 TAS2R14Q9NYV8 317 aa19.03■□□□□ 0.64
CLIP2-202ENST00000361545 SHOC2Q9UQ13 582 aa19.03■□□□□ 0.64
CLIP2-202ENST00000361545 MT-CO1P00395 513 aa19.03■□□□□ 0.64
CLIP2-202ENST00000361545 CCDC3Q9BQI4 270 aa19.03■□□□□ 0.64
CLIP2-202ENST00000361545 OSBPL1AQ9BXW6 950 aa19.03■□□□□ 0.64
CLIP2-202ENST00000361545 ZDHHC6Q9H6R6 413 aa19.03■□□□□ 0.64
CLIP2-202ENST00000361545 CDH9Q9ULB4 789 aa19.03■□□□□ 0.64
CLIP2-202ENST00000361545 ATP5BP06576 529 aaKnown RBP19.03■□□□□ 0.64
CLIP2-202ENST00000361545 GRK4P32298 578 aa19.03■□□□□ 0.64
CLIP2-202ENST00000361545 CD151P48509 253 aa19.03■□□□□ 0.64
CLIP2-202ENST00000361545 NR2C2P49116 596 aa19.03■□□□□ 0.64
CLIP2-202ENST00000361545 CNGA2Q16280 664 aa19.03■□□□□ 0.64
CLIP2-202ENST00000361545 USP41Q3LFD5 358 aa19.03■□□□□ 0.64
CLIP2-202ENST00000361545 DSG4Q86SJ6 1040 aa19.03■□□□□ 0.64
CLIP2-202ENST00000361545 SETD3Q86TU7 594 aaPredicted RBP19.03■□□□□ 0.64
CLIP2-202ENST00000361545 AGGF1Q8N302 714 aaeCLIP19.03■□□□□ 0.64
CLIP2-202ENST00000361545 SPATA20Q8TB22 786 aa19.03■□□□□ 0.64
CLIP2-202ENST00000361545 FAM84AQ96KN4 292 aa19.03■□□□□ 0.64
CLIP2-202ENST00000361545 TDRKHQ9Y2W6 561 aaKnown RBP19.03■□□□□ 0.64
CLIP2-202ENST00000361545 ADGRB2O60241 1585 aa19.02■□□□□ 0.64
CLIP2-202ENST00000361545 TLL1O43897 1013 aa19.02■□□□□ 0.64
CLIP2-202ENST00000361545 CDH2P19022 906 aaPredicted RBP19.02■□□□□ 0.64
CLIP2-202ENST00000361545 MMP13P45452 471 aa19.02■□□□□ 0.64
CLIP2-202ENST00000361545 ZNF470Q6ECI4 717 aa19.02■□□□□ 0.64
CLIP2-202ENST00000361545 FAM183BPQ6ZVS7 135 aa19.02■□□□□ 0.64
CLIP2-202ENST00000361545 GRIN3AQ8TCU5 1115 aa19.02■□□□□ 0.64
CLIP2-202ENST00000361545 PHF21BQ96EK2 531 aa19.02■□□□□ 0.64
CLIP2-202ENST00000361545 ACOX2Q99424 681 aa19.02■□□□□ 0.64
CLIP2-202ENST00000361545 MFSD1Q9H3U5 465 aa19.02■□□□□ 0.64
CLIP2-202ENST00000361545 HIPK3Q9H422 1215 aa19.02■□□□□ 0.64
CLIP2-202ENST00000361545 NXF3Q9H4D5 531 aaKnown RBP19.02■□□□□ 0.64
CLIP2-202ENST00000361545 TRHDEQ9UKU6 1024 aa19.02■□□□□ 0.64
CLIP2-202ENST00000361545 RBL1P28749 1068 aa19.02■□□□□ 0.64
CLIP2-202ENST00000361545 PGS1Q32NB8 556 aa19.02■□□□□ 0.64
CLIP2-202ENST00000361545 KCNMB4Q86W47 210 aa19.02■□□□□ 0.64
CLIP2-202ENST00000361545 SYTL1Q8IYJ3 562 aa19.02■□□□□ 0.64
CLIP2-202ENST00000361545 GALNT4Q8N4A0 578 aa19.02■□□□□ 0.64
CLIP2-202ENST00000361545 CYGBQ8WWM9 190 aa19.02■□□□□ 0.64
CLIP2-202ENST00000361545 ABTB1Q969K4 478 aaPredicted RBP19.02■□□□□ 0.64
CLIP2-202ENST00000361545 ELOVL6Q9H5J4 265 aa19.02■□□□□ 0.64
CLIP2-202ENST00000361545 MAGEB16A2A368 324 aa19.02■□□□□ 0.64
CLIP2-202ENST00000361545 CCNT2O60583 730 aaKnown RBP19.02■□□□□ 0.64
CLIP2-202ENST00000361545 MLNP12872 115 aa19.02■□□□□ 0.64
CLIP2-202ENST00000361545 MIER2Q8N344 545 aa19.02■□□□□ 0.64
CLIP2-202ENST00000361545 GPR152Q8TDT2 470 aa19.02■□□□□ 0.64
CLIP2-202ENST00000361545 SEMA4AQ9H3S1 761 aa19.02■□□□□ 0.64
CLIP2-202ENST00000361545 FAM105AQ9NUU6 356 aa19.02■□□□□ 0.64
CLIP2-202ENST00000361545 SAE1Q9UBE0 346 aaPredicted RBP19.02■□□□□ 0.64
CLIP2-202ENST00000361545 FAM153AQ9UHL3 310 aa19.02■□□□□ 0.64
CLIP2-202ENST00000361545 RICTORQ6R327 1708 aa19.02■□□□□ 0.63
CLIP2-202ENST00000361545 TRAV19A0A0A6YYK7 116 aa19.02■□□□□ 0.63
CLIP2-202ENST00000361545 CPA3P15088 417 aa19.02■□□□□ 0.63
CLIP2-202ENST00000361545 FBXL19Q6PCT2 694 aa19.02■□□□□ 0.63
CLIP2-202ENST00000361545 IRAK1P51617 712 aa19.01■□□□□ 0.63
CLIP2-202ENST00000361545 AASDHQ4L235 1098 aaPredicted RBP19.01■□□□□ 0.63
CLIP2-202ENST00000361545 TBL1YQ9BQ87 522 aa19.01■□□□□ 0.63
CLIP2-202ENST00000361545 NCKAP1Q9Y2A7 1128 aa19.01■□□□□ 0.63
CLIP2-202ENST00000361545 MGAT4DA6NG13 374 aa19.01■□□□□ 0.63
CLIP2-202ENST00000361545 TRDMT1O14717 391 aaKnown RBP19.01■□□□□ 0.63
CLIP2-202ENST00000361545 TPST1O60507 370 aa19.01■□□□□ 0.63
CLIP2-202ENST00000361545 MMP3P08254 477 aa19.01■□□□□ 0.63
CLIP2-202ENST00000361545 TFE3P19532 575 aaPredicted RBP19.01■□□□□ 0.63
CLIP2-202ENST00000361545 CNTN1Q12860 1018 aa19.01■□□□□ 0.63
CLIP2-202ENST00000361545 ARMC12Q5T9G4 340 aa19.01■□□□□ 0.63
CLIP2-202ENST00000361545 DENND1CQ8IV53 801 aa19.01■□□□□ 0.63
CLIP2-202ENST00000361545 CATSPER1Q8NEC5 780 aa19.01■□□□□ 0.63
CLIP2-202ENST00000361545 NSL1Q96IY1 281 aa19.01■□□□□ 0.63
CLIP2-202ENST00000361545 SERAC1Q96JX3 654 aa19.01■□□□□ 0.63
CLIP2-202ENST00000361545 CAPNS2Q96L46 248 aa19.01■□□□□ 0.63
CLIP2-202ENST00000361545 TSEN34Q9BSV6 310 aaKnown RBP19.01■□□□□ 0.63
CLIP2-202ENST00000361545 DNAJC16Q9Y2G8 782 aa19.01■□□□□ 0.63
CLIP2-202ENST00000361545 ARF4P18085 180 aaPredicted RBP19.01■□□□□ 0.63
CLIP2-202ENST00000361545 BRCC3P46736 316 aa19.01■□□□□ 0.63
CLIP2-202ENST00000361545 COPAP53621 1224 aa19.01■□□□□ 0.63
CLIP2-202ENST00000361545 LRRC23Q53EV4 343 aaPredicted RBP19.01■□□□□ 0.63
CLIP2-202ENST00000361545 RGS18Q9NS28 235 aa19.01■□□□□ 0.63
CLIP2-202ENST00000361545 HEY2Q9UBP5 337 aa19.01■□□□□ 0.63
CLIP2-202ENST00000361545 SEPT3Q9UH03 358 aa19.01■□□□□ 0.63
CLIP2-202ENST00000361545 DNMT3LQ9UJW3 386 aa19.01■□□□□ 0.63
CLIP2-202ENST00000361545 ZNF7P17097 686 aaPredicted RBP19.01■□□□□ 0.63
CLIP2-202ENST00000361545 CHI3L1P36222 383 aaPredicted RBP19.01■□□□□ 0.63
CLIP2-202ENST00000361545 PCBP1Q15365 356 aaKnown RBP eCLIP19.01■□□□□ 0.63
CLIP2-202ENST00000361545 PSMD5Q16401 504 aa19.01■□□□□ 0.63
CLIP2-202ENST00000361545 DDR2Q16832 855 aa19.01■□□□□ 0.63
CLIP2-202ENST00000361545 GPR20Q99678 358 aa19.01■□□□□ 0.63
CLIP2-202ENST00000361545 KLC4Q9NSK0 619 aa19.01■□□□□ 0.63
CLIP2-202ENST00000361545 ZSCAN5CA6NGD5 496 aaPredicted RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms