RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 GIPC3Q8TF64 312 aa15.35■□□□□ 0.05
UBAP1-202ENST00000359544 DLG3Q92796 817 aa15.35■□□□□ 0.05
UBAP1-202ENST00000359544 COX4I2Q96KJ9 171 aa15.35■□□□□ 0.05
UBAP1-202ENST00000359544 SHCBP1LQ9BZQ2 653 aa15.35■□□□□ 0.05
UBAP1-202ENST00000359544 RMI1Q9H9A7 625 aa15.35■□□□□ 0.05
UBAP1-202ENST00000359544 AS3MTQ9HBK9 375 aa15.35■□□□□ 0.05
UBAP1-202ENST00000359544 TBC1D23Q9NUY8 699 aa15.35■□□□□ 0.05
UBAP1-202ENST00000359544 MYH9P35579 1960 aaKnown RBP15.34■□□□□ 0.05
UBAP1-202ENST00000359544 MYOCOSA0A1B0GUC4 107 aa15.34■□□□□ 0.05
UBAP1-202ENST00000359544 TRIM43BA6NCK2 446 aa15.34■□□□□ 0.05
UBAP1-202ENST00000359544 CXorf49A8MYA2 514 aaPredicted RBP15.34■□□□□ 0.05
UBAP1-202ENST00000359544 LYPLA2O95372 231 aa15.34■□□□□ 0.05
UBAP1-202ENST00000359544 THRAP10827 490 aa15.34■□□□□ 0.05
UBAP1-202ENST00000359544 OGDHQ02218 1023 aa15.34■□□□□ 0.05
UBAP1-202ENST00000359544 HADHQ16836 314 aaKnown RBP15.34■□□□□ 0.05
UBAP1-202ENST00000359544 SYCP2LQ5T4T6 812 aa15.34■□□□□ 0.05
UBAP1-202ENST00000359544 LOC100653049A0A140TA62 436 aa15.34■□□□□ 0.05
UBAP1-202ENST00000359544 TCRBV5S1A1TA0A578 114 aa15.34■□□□□ 0.05
UBAP1-202ENST00000359544 APOC4-APOC2K7ER74 178 aa15.34■□□□□ 0.05
UBAP1-202ENST00000359544 LYPLA1O75608 230 aaPredicted RBP15.34■□□□□ 0.05
UBAP1-202ENST00000359544 KRT34O76011 436 aa15.34■□□□□ 0.05
UBAP1-202ENST00000359544 APOC2P02655 101 aa15.34■□□□□ 0.05
UBAP1-202ENST00000359544 SERPINE1P05121 402 aa15.34■□□□□ 0.05
UBAP1-202ENST00000359544 TBXAS1P24557 533 aaPredicted RBP15.34■□□□□ 0.05
UBAP1-202ENST00000359544 PHKA2P46019 1235 aa15.34■□□□□ 0.05
UBAP1-202ENST00000359544 QARSP47897 775 aaKnown RBP15.34■□□□□ 0.05
UBAP1-202ENST00000359544 YWHAZP63104 245 aaKnown RBP15.34■□□□□ 0.05
UBAP1-202ENST00000359544 DMP1Q13316 513 aaPredicted RBP15.34■□□□□ 0.05
UBAP1-202ENST00000359544 C16orf72Q14CZ0 275 aa15.34■□□□□ 0.05
UBAP1-202ENST00000359544 TAZQ16635 292 aa15.34■□□□□ 0.05
UBAP1-202ENST00000359544 FAM102BQ5T8I3 360 aa15.34■□□□□ 0.05
UBAP1-202ENST00000359544 PAOXQ6QHF9 649 aa15.34■□□□□ 0.05
UBAP1-202ENST00000359544 TMEM179Q6ZVK1 233 aa15.34■□□□□ 0.05
UBAP1-202ENST00000359544 RSPH3Q86UC2 560 aa15.34■□□□□ 0.05
UBAP1-202ENST00000359544 REM2Q8IYK8 340 aaPredicted RBP15.34■□□□□ 0.05
UBAP1-202ENST00000359544 EFCAB3Q8N7B9 438 aa15.34■□□□□ 0.05
UBAP1-202ENST00000359544 FAF2Q96CS3 445 aa15.34■□□□□ 0.05
UBAP1-202ENST00000359544 ARHGAP39Q9C0H5 1083 aa15.34■□□□□ 0.05
UBAP1-202ENST00000359544 SAGE1Q9NXZ1 904 aa15.34■□□□□ 0.05
UBAP1-202ENST00000359544 TMED5Q9Y3A6 229 aa15.34■□□□□ 0.05
UBAP1-202ENST00000359544 LSM8O95777 96 aaKnown RBP15.33■□□□□ 0.04
UBAP1-202ENST00000359544 APOEP02649 317 aa15.33■□□□□ 0.04
UBAP1-202ENST00000359544 CAPNS1P04632 268 aa15.33■□□□□ 0.04
UBAP1-202ENST00000359544 FGF3P11487 239 aaPredicted RBP15.33■□□□□ 0.04
UBAP1-202ENST00000359544 OSBPP22059 807 aa15.33■□□□□ 0.04
UBAP1-202ENST00000359544 GARTP22102 1010 aa15.33■□□□□ 0.04
UBAP1-202ENST00000359544 GRK2P25098 689 aa15.33■□□□□ 0.04
UBAP1-202ENST00000359544 CNTFP26441 200 aa15.33■□□□□ 0.04
UBAP1-202ENST00000359544 GJA8P48165 433 aa15.33■□□□□ 0.04
UBAP1-202ENST00000359544 NAA20P61599 178 aa15.33■□□□□ 0.04
UBAP1-202ENST00000359544 ROR1Q01973 937 aa15.33■□□□□ 0.04
UBAP1-202ENST00000359544 FLOT2Q14254 428 aa15.33■□□□□ 0.04
UBAP1-202ENST00000359544 ZACNQ401N2 412 aa15.33■□□□□ 0.04
UBAP1-202ENST00000359544 RWDD4Q6NW29 188 aaKnown RBP15.33■□□□□ 0.04
UBAP1-202ENST00000359544 TIFABQ6ZNK6 161 aa15.33■□□□□ 0.04
UBAP1-202ENST00000359544 RFX6Q8HWS3 928 aa15.33■□□□□ 0.04
UBAP1-202ENST00000359544 RIN3Q8TB24 985 aa15.33■□□□□ 0.04
UBAP1-202ENST00000359544 COPS7BQ9H9Q2 264 aaPredicted RBP15.33■□□□□ 0.04
UBAP1-202ENST00000359544 POPDC2Q9HBU9 364 aa15.33■□□□□ 0.04
UBAP1-202ENST00000359544 GPRC5CQ9NQ84 441 aa15.33■□□□□ 0.04
UBAP1-202ENST00000359544 IGSF9Q9P2J2 1179 aa15.33■□□□□ 0.04
UBAP1-202ENST00000359544 SLC9A2Q9UBY0 812 aa15.33■□□□□ 0.04
UBAP1-202ENST00000359544 CNTN6Q9UQ52 1028 aa15.33■□□□□ 0.04
UBAP1-202ENST00000359544 H0YJX3 145 aa15.33■□□□□ 0.04
UBAP1-202ENST00000359544 KDELR1P24390 212 aa15.33■□□□□ 0.04
UBAP1-202ENST00000359544 YWHABP31946 246 aaKnown RBP15.33■□□□□ 0.04
UBAP1-202ENST00000359544 TUBA4AP68366 448 aa15.33■□□□□ 0.04
UBAP1-202ENST00000359544 MRPS22P82650 360 aaKnown RBP15.33■□□□□ 0.04
UBAP1-202ENST00000359544 RELAQ04206 551 aa15.33■□□□□ 0.04
UBAP1-202ENST00000359544 FASTKD5Q7L8L6 764 aaKnown RBP15.33■□□□□ 0.04
UBAP1-202ENST00000359544 CORO1BQ9BR76 489 aa15.33■□□□□ 0.04
UBAP1-202ENST00000359544 MXRA8Q9BRK3 442 aa15.33■□□□□ 0.04
UBAP1-202ENST00000359544 PRR12Q9ULL5 1215 aa15.33■□□□□ 0.04
UBAP1-202ENST00000359544 PTPRFP10586 1907 aa15.32■□□□□ 0.04
UBAP1-202ENST00000359544 RBM47A0AV96 593 aaKnown RBP15.32■□□□□ 0.04
UBAP1-202ENST00000359544 TMEM247A6NEH6 219 aa15.32■□□□□ 0.04
UBAP1-202ENST00000359544 ADCY6O43306 1168 aa15.32■□□□□ 0.04
UBAP1-202ENST00000359544 SERPINB7O75635 380 aa15.32■□□□□ 0.04
UBAP1-202ENST00000359544 ALDH1A1P00352 501 aa15.32■□□□□ 0.04
UBAP1-202ENST00000359544 PPARGP37231 505 aaPredicted RBP15.32■□□□□ 0.04
UBAP1-202ENST00000359544 ENTPD1P49961 510 aa15.32■□□□□ 0.04
UBAP1-202ENST00000359544 CDKL1Q00532 357 aa15.32■□□□□ 0.04
UBAP1-202ENST00000359544 SLC25A11Q02978 314 aaKnown RBP15.32■□□□□ 0.04
UBAP1-202ENST00000359544 CYTH1Q15438 398 aa15.32■□□□□ 0.04
UBAP1-202ENST00000359544 SLC39A4Q6P5W5 647 aa15.32■□□□□ 0.04
UBAP1-202ENST00000359544 MAVSQ7Z434 540 aa15.32■□□□□ 0.04
UBAP1-202ENST00000359544 ADGRF2Q8IZF7 708 aa15.32■□□□□ 0.04
UBAP1-202ENST00000359544 UBR7Q8N806 425 aa15.32■□□□□ 0.04
UBAP1-202ENST00000359544 ZNF516Q92618 1163 aa15.32■□□□□ 0.04
UBAP1-202ENST00000359544 LRRC39Q96DD0 335 aa15.32■□□□□ 0.04
UBAP1-202ENST00000359544 FAM213AQ9BRX8 229 aa15.32■□□□□ 0.04
UBAP1-202ENST00000359544 ZFYVE28Q9HCC9 887 aa15.32■□□□□ 0.04
UBAP1-202ENST00000359544 KMT5AQ9NQR1 393 aa15.32■□□□□ 0.04
UBAP1-202ENST00000359544 VPS45Q9NRW7 570 aa15.32■□□□□ 0.04
UBAP1-202ENST00000359544 VPS28Q9UK41 221 aa15.32■□□□□ 0.04
UBAP1-202ENST00000359544 GLRA3O75311 464 aa15.32■□□□□ 0.04
UBAP1-202ENST00000359544 STAM2O75886 525 aa15.32■□□□□ 0.04
UBAP1-202ENST00000359544 H6PDO95479 791 aa15.32■□□□□ 0.04
UBAP1-202ENST00000359544 ZNF12P17014 697 aa15.32■□□□□ 0.04
UBAP1-202ENST00000359544 ZNF24P17028 368 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms