RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 DLGAP2Q9P1A6 1054 aa13.11□□□□□ -0.31
RTFDC1-202ENST00000357348 HEY2Q9UBP5 337 aa13.11□□□□□ -0.31
RTFDC1-202ENST00000357348 hCG_1818297A0A087WSY0 165 aa13.1□□□□□ -0.31
RTFDC1-202ENST00000357348 TCRBV5S1A1TA0A578 114 aa13.1□□□□□ -0.31
RTFDC1-202ENST00000357348 TBX10O75333 385 aa13.1□□□□□ -0.31
RTFDC1-202ENST00000357348 FAM155BO75949 473 aa13.1□□□□□ -0.31
RTFDC1-202ENST00000357348 KRT36O76013 467 aa13.1□□□□□ -0.31
RTFDC1-202ENST00000357348 KRT10P13645 584 aa13.1□□□□□ -0.31
RTFDC1-202ENST00000357348 PHBP35232 272 aa13.1□□□□□ -0.31
RTFDC1-202ENST00000357348 GNL1P36915 607 aaPredicted RBP13.1□□□□□ -0.31
RTFDC1-202ENST00000357348 ETV4P43268 484 aa13.1□□□□□ -0.31
RTFDC1-202ENST00000357348 KPNB1Q14974 876 aaKnown RBP13.1□□□□□ -0.31
RTFDC1-202ENST00000357348 PRKD1Q15139 912 aaPredicted RBP13.1□□□□□ -0.31
RTFDC1-202ENST00000357348 SPOCD1Q6ZMY3 1216 aa13.1□□□□□ -0.31
RTFDC1-202ENST00000357348 OSTM1Q86WC4 334 aa13.1□□□□□ -0.31
RTFDC1-202ENST00000357348 NPAS4Q8IUM7 802 aa13.1□□□□□ -0.31
RTFDC1-202ENST00000357348 ATP11CQ8NB49 1132 aa13.1□□□□□ -0.31
RTFDC1-202ENST00000357348 SLC35B2Q8TB61 432 aa13.1□□□□□ -0.31
RTFDC1-202ENST00000357348 DCAKDQ8WVC6 231 aa13.1□□□□□ -0.31
RTFDC1-202ENST00000357348 NT5C1AQ9BXI3 368 aa13.1□□□□□ -0.31
RTFDC1-202ENST00000357348 SNX25Q9H3E2 840 aa13.1□□□□□ -0.31
RTFDC1-202ENST00000357348 ELAC1Q9H777 363 aaKnown RBP13.1□□□□□ -0.31
RTFDC1-202ENST00000357348 NRDE2Q9H7Z3 1164 aa13.1□□□□□ -0.31
RTFDC1-202ENST00000357348 PARVAQ9NVD7 372 aa13.1□□□□□ -0.31
RTFDC1-202ENST00000357348 GDAP2Q9NXN4 497 aa13.1□□□□□ -0.31
RTFDC1-202ENST00000357348 TAS2R1Q9NYW7 299 aa13.1□□□□□ -0.31
RTFDC1-202ENST00000357348 SCOCQ9UIL1 159 aa13.1□□□□□ -0.31
RTFDC1-202ENST00000357348 MAGEA13PA6NCF6 341 aa13.09□□□□□ -0.31
RTFDC1-202ENST00000357348 TMEM191CA6NGB0 347 aa13.09□□□□□ -0.31
RTFDC1-202ENST00000357348 MAGEC1O60732 1142 aa13.09□□□□□ -0.31
RTFDC1-202ENST00000357348 DLDP09622 509 aaKnown RBP13.09□□□□□ -0.31
RTFDC1-202ENST00000357348 NEK3P51956 506 aa13.09□□□□□ -0.31
RTFDC1-202ENST00000357348 ARFIP2P53365 341 aa13.09□□□□□ -0.31
RTFDC1-202ENST00000357348 CBLBQ13191 982 aa13.09□□□□□ -0.31
RTFDC1-202ENST00000357348 BIRC2Q13490 618 aa13.09□□□□□ -0.31
RTFDC1-202ENST00000357348 ZRSR2Q15696 482 aaKnown RBP13.09□□□□□ -0.31
RTFDC1-202ENST00000357348 CCDC6Q16204 474 aa13.09□□□□□ -0.31
RTFDC1-202ENST00000357348 ATP13A4Q4VNC1 1196 aa13.09□□□□□ -0.31
RTFDC1-202ENST00000357348 CD300LGQ6UXG3 332 aa13.09□□□□□ -0.31
RTFDC1-202ENST00000357348 RINLQ6ZS11 566 aa13.09□□□□□ -0.31
RTFDC1-202ENST00000357348 SH2D5Q6ZV89 423 aa13.09□□□□□ -0.31
RTFDC1-202ENST00000357348 C16orf59Q7L2K0 433 aa13.09□□□□□ -0.31
RTFDC1-202ENST00000357348 COLGALT2Q8IYK4 626 aa13.09□□□□□ -0.31
RTFDC1-202ENST00000357348 CRIPAKQ8N1N5 446 aa13.09□□□□□ -0.31
RTFDC1-202ENST00000357348 NAT8LQ8N9F0 302 aa13.09□□□□□ -0.31
RTFDC1-202ENST00000357348 PTPRN2Q92932 1015 aa13.09□□□□□ -0.31
RTFDC1-202ENST00000357348 PAFAH2Q99487 392 aa13.09□□□□□ -0.31
RTFDC1-202ENST00000357348 WDR83Q9BRX9 315 aaKnown RBP13.09□□□□□ -0.31
RTFDC1-202ENST00000357348 PIDD1Q9HB75 910 aa13.09□□□□□ -0.31
RTFDC1-202ENST00000357348 CCDC85CA6NKD9 419 aa13.09□□□□□ -0.31
RTFDC1-202ENST00000357348 F8W8V4 182 aa13.09□□□□□ -0.31
RTFDC1-202ENST00000357348 KLF11O14901 512 aa13.09□□□□□ -0.31
RTFDC1-202ENST00000357348 GYG2O15488 501 aa13.09□□□□□ -0.31
RTFDC1-202ENST00000357348 RPL9P32969 192 aaKnown RBP13.09□□□□□ -0.31
RTFDC1-202ENST00000357348 SLC18A2Q05940 514 aa13.09□□□□□ -0.31
RTFDC1-202ENST00000357348 INCA1Q0VD86 236 aa13.09□□□□□ -0.31
RTFDC1-202ENST00000357348 HIF1AQ16665 826 aa13.09□□□□□ -0.31
RTFDC1-202ENST00000357348 FOXB2Q5VYV0 432 aa13.09□□□□□ -0.31
RTFDC1-202ENST00000357348 EGFL6Q8IUX8 553 aa13.09□□□□□ -0.31
RTFDC1-202ENST00000357348 UBA3Q8TBC4 463 aa13.09□□□□□ -0.31
RTFDC1-202ENST00000357348 B3GALT6Q96L58 329 aa13.09□□□□□ -0.31
RTFDC1-202ENST00000357348 CCDC28BQ9BUN5 200 aa13.09□□□□□ -0.31
RTFDC1-202ENST00000357348 ARHGEF4Q9NR80 690 aa13.09□□□□□ -0.31
RTFDC1-202ENST00000357348 KRT82Q9NSB4 513 aa13.09□□□□□ -0.31
RTFDC1-202ENST00000357348 DCTN4Q9UJW0 460 aa13.09□□□□□ -0.31
RTFDC1-202ENST00000357348 EFR3BQ9Y2G0 817 aa13.09□□□□□ -0.31
RTFDC1-202ENST00000357348 PTPRSQ13332 1948 aa13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 CFAP69A5D8W1 941 aa13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 PI4K2BG5E9Z4 385 aa13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 SMAPO00193 183 aa13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 PIK3R2O00459 728 aa13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 NRP1O14786 923 aa13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 CAPN9O14815 690 aa13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 KRT1P04264 644 aa13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 CCDC130P13994 396 aa13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 RFC2P35250 354 aa13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 WDR5P61964 334 aaKnown RBP13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 DSC1Q08554 894 aa13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 ZNF252P-AS1Q0IIN9 211 aa13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 RCN2Q14257 317 aa13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 PPP1R26Q5T8A7 1209 aaPredicted RBP13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 PPIL6Q8IXY8 311 aa13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 PHC3Q8NDX5 983 aa13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 WDR60Q8WVS4 1066 aa13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 DPF3Q92784 378 aa13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 NR1H4Q96RI1 486 aaPredicted RBP13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 TSSK1BQ9BXA7 367 aa13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 FRMD8P1Q9BZ68 369 aaPredicted RBP13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 FAM192AQ9GZU8 254 aa13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 SLC17A7Q9P2U7 560 aa13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 USTQ9Y2C2 406 aa13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 LTBP2Q14767 1821 aa13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 TADA2AO75478 443 aa13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 RTN3O95197 1032 aaPredicted RBP13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 TCF4P15884 667 aa13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 MMP8P22894 467 aa13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 ADORA2BP29275 332 aa13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 SERPINB3P29508 390 aa13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 GJC1P36383 396 aa13.08□□□□□ -0.32
RTFDC1-202ENST00000357348 CDKN2BP42772 138 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms