RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 MGRN1O60291 552 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 TUFMP49411 452 aaKnown RBP5.67□□□□□ -1.5
PTPRD-202ENST00000356435 TRIM28Q13263 835 aaKnown RBP5.67□□□□□ -1.5
PTPRD-202ENST00000356435 LACTB2Q53H82 288 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-202ENST00000356435 FAAH2Q6GMR7 532 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 PRMT9Q6P2P2 845 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 LAYNQ6UX15 382 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 EPHX4Q8IUS5 362 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 GALNT4Q8N4A0 578 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.67□□□□□ -1.5
PTPRD-202ENST00000356435 ERGIC2Q96RQ1 377 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 PI4K2AQ9BTU6 479 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 BCL2L14Q9BZR8 327 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 GJB4Q9NTQ9 266 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 PRKAG3Q9UGI9 489 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 PLAGL2Q9UPG8 496 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 RUVBL2Q9Y230 463 aaKnown RBP5.67□□□□□ -1.5
PTPRD-202ENST00000356435 TNFSF13BQ9Y275 285 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 NID2Q14112 1375 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 NFIBO00712 420 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 RAMP2O60895 175 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 SERPINF2P08697 491 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 RAP1GAPP47736 663 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 MOXD1Q6UVY6 613 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 METTL7BQ6UX53 244 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 COLGALT2Q8IYK4 626 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 WDR36Q8NI36 951 aaKnown RBP5.67□□□□□ -1.5
PTPRD-202ENST00000356435 NKX2-3Q8TAU0 364 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 MAGED4Q96JG8 741 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 PANX3Q96QZ0 392 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 ELOVL4Q9GZR5 314 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 ZFYVE1Q9HBF4 777 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 FXR1P51114 621 aaKnown RBP eCLIP5.67□□□□□ -1.5
PTPRD-202ENST00000356435 BOP1Q14137 746 aaKnown RBP5.67□□□□□ -1.5
PTPRD-202ENST00000356435 MTF1Q14872 753 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 KLHDC7AQ5VTJ3 777 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 FBXL19Q6PCT2 694 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 FAM120BQ96EK7 910 aaKnown RBP5.67□□□□□ -1.5
PTPRD-202ENST00000356435 CNPPD1Q9BV87 410 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 YIPF3Q9GZM5 350 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 RNF208Q9H0X6 261 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 AP4S1Q9Y587 144 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 UMODL1Q5DID0 1318 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 MROH7Q68CQ1 1323 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 DIP2CQ9Y2E4 1556 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 GPR75-ASB3A0A0A6YYF3 556 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 MAGEB16A2A368 324 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 NR5A2O00482 541 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 TPBGLP0DKB5 382 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 TYMPP19971 482 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 SERPINA4P29622 427 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 HNMTP50135 292 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 ATG9AQ7Z3C6 839 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 NT5DC3Q86UY8 548 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 ZDHHC17Q8IUH5 632 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 KAT2BQ92831 832 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 PURBQ96QR8 312 aaKnown RBP5.67□□□□□ -1.5
PTPRD-202ENST00000356435 HMX1Q9NP08 348 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-202ENST00000356435 ADPRHL2Q9NX46 363 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 STON1Q9Y6Q2 735 aa5.67□□□□□ -1.5
PTPRD-202ENST00000356435 RIC1Q4ADV7 1423 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 C1QTNF3-AMACRE9PGA6 284 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 AHCYL1O43865 530 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 FGF19O95750 216 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 PAEPP09466 180 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 AMD1P17707 334 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 ATP6V1B2P21281 511 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 POU1F1P28069 291 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 FLT3P36888 993 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 OAZ1P54368 228 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 MRPS35P82673 323 aaKnown RBP5.66□□□□□ -1.5
PTPRD-202ENST00000356435 DSG1Q02413 1049 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 PMF1Q6P1K2 205 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 NEK5Q6P3R8 708 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 IQCKQ8N0W5 287 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 SIX5Q8N196 739 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 MTERF3Q96E29 417 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 GMCL1Q96IK5 515 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 FAM118BQ9BPY3 351 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 GPAMQ9HCL2 828 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 ASAH2Q9NR71 780 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 PCDHB9Q9Y5E1 797 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 GRIN2DO15399 1336 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 RPTORQ8N122 1335 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 SNAP23O00161 211 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 CXCR2P25025 360 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 CSNK2BP67870 215 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 SLC25A24Q6NUK1 477 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 PEG10Q86TG7 708 aaKnown RBP5.66□□□□□ -1.5
PTPRD-202ENST00000356435 FHDC1Q9C0D6 1143 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-202ENST00000356435 RACGAP1Q9H0H5 632 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 ARIH1Q9Y4X5 557 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-202ENST00000356435 NFAT5O94916 1531 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 C5orf60A6NFR6 353 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 FANCGO15287 622 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 HIST1H2ABP04908 130 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 HTR1BP28222 390 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 DSG3P32926 999 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 BIKQ13323 160 aa5.66□□□□□ -1.5
PTPRD-202ENST00000356435 ITIH4Q14624 930 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms