RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 PSMB4P28070 264 aa18.19■□□□□ 0.5
NPAS3-202ENST00000356141 TTC31Q49AM3 519 aaPredicted RBP18.19■□□□□ 0.5
NPAS3-202ENST00000356141 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.19■□□□□ 0.5
NPAS3-202ENST00000356141 COLGALT2Q8IYK4 626 aa18.19■□□□□ 0.5
NPAS3-202ENST00000356141 TFB1MQ8WVM0 346 aaKnown RBP18.19■□□□□ 0.5
NPAS3-202ENST00000356141 SUSD3Q96L08 255 aa18.19■□□□□ 0.5
NPAS3-202ENST00000356141 XPO6Q96QU8 1125 aaKnown RBP18.19■□□□□ 0.5
NPAS3-202ENST00000356141 CXorf56Q9H5V9 222 aa18.19■□□□□ 0.5
NPAS3-202ENST00000356141 SCN5AQ14524 2016 aa18.19■□□□□ 0.5
NPAS3-202ENST00000356141 CABYRO75952 493 aa18.18■□□□□ 0.5
NPAS3-202ENST00000356141 MGAT5BQ3V5L5 792 aa18.18■□□□□ 0.5
NPAS3-202ENST00000356141 KBTBD12Q3ZCT8 623 aa18.18■□□□□ 0.5
NPAS3-202ENST00000356141 SLC45A4Q5BKX6 768 aa18.18■□□□□ 0.5
NPAS3-202ENST00000356141 BTBD8Q5XKL5 378 aa18.18■□□□□ 0.5
NPAS3-202ENST00000356141 FAM47EQ6ZV65 393 aa18.18■□□□□ 0.5
NPAS3-202ENST00000356141 LRRC34Q8IZ02 419 aa18.18■□□□□ 0.5
NPAS3-202ENST00000356141 HTR3CQ8WXA8 447 aa18.18■□□□□ 0.5
NPAS3-202ENST00000356141 KCTD13Q8WZ19 329 aa18.18■□□□□ 0.5
NPAS3-202ENST00000356141 CCDC77Q9BR77 488 aa18.18■□□□□ 0.5
NPAS3-202ENST00000356141 NDFIP2Q9NV92 336 aa18.18■□□□□ 0.5
NPAS3-202ENST00000356141 USP3Q9Y6I4 520 aa18.18■□□□□ 0.5
NPAS3-202ENST00000356141 ALOX15BO15296 676 aa18.18■□□□□ 0.5
NPAS3-202ENST00000356141 STIP1P31948 543 aaKnown RBP18.18■□□□□ 0.5
NPAS3-202ENST00000356141 MMP13P45452 471 aa18.18■□□□□ 0.5
NPAS3-202ENST00000356141 RPL34P49207 117 aaKnown RBP18.18■□□□□ 0.5
NPAS3-202ENST00000356141 BMPR2Q13873 1038 aa18.18■□□□□ 0.5
NPAS3-202ENST00000356141 FAM171BQ6P995 826 aa18.18■□□□□ 0.5
NPAS3-202ENST00000356141 TRMT10BQ6PF06 316 aaKnown RBP18.18■□□□□ 0.5
NPAS3-202ENST00000356141 PID1Q7Z2X4 250 aa18.18■□□□□ 0.5
NPAS3-202ENST00000356141 PPM1NQ8N819 430 aa18.18■□□□□ 0.5
NPAS3-202ENST00000356141 COLGALT1Q8NBJ5 622 aa18.18■□□□□ 0.5
NPAS3-202ENST00000356141 SLC2A13Q96QE2 648 aa18.18■□□□□ 0.5
NPAS3-202ENST00000356141 CNGB3Q9NQW8 809 aa18.18■□□□□ 0.5
NPAS3-202ENST00000356141 SUFUQ9UMX1 484 aa18.18■□□□□ 0.5
NPAS3-202ENST00000356141 RRP15Q9Y3B9 282 aaKnown RBP18.18■□□□□ 0.5
NPAS3-202ENST00000356141 SHROOM3Q8TF72 1996 aa18.18■□□□□ 0.5
NPAS3-202ENST00000356141 GMNCA6NCL1 334 aa18.18■□□□□ 0.5
NPAS3-202ENST00000356141 CXorf49A8MYA2 514 aaPredicted RBP18.18■□□□□ 0.5
NPAS3-202ENST00000356141 LRIG2O94898 1065 aa18.18■□□□□ 0.5
NPAS3-202ENST00000356141 GMPRP36959 345 aa18.18■□□□□ 0.5
NPAS3-202ENST00000356141 KCNJ11Q14654 390 aa18.18■□□□□ 0.5
NPAS3-202ENST00000356141 ANKRD20A2Q5SQ80 823 aa18.18■□□□□ 0.5
NPAS3-202ENST00000356141 RNF187Q5TA31 235 aaPredicted RBP18.18■□□□□ 0.5
NPAS3-202ENST00000356141 ANKRD20A1Q5TYW2 823 aa18.18■□□□□ 0.5
NPAS3-202ENST00000356141 ANKRD20A3Q5VUR7 823 aa18.18■□□□□ 0.5
NPAS3-202ENST00000356141 TFAP2DQ7Z6R9 452 aa18.18■□□□□ 0.5
NPAS3-202ENST00000356141 M0QZQ0 153 aa18.17■□□□□ 0.5
NPAS3-202ENST00000356141 CA8P35219 290 aa18.17■□□□□ 0.5
NPAS3-202ENST00000356141 SLC11A1P49279 550 aa18.17■□□□□ 0.5
NPAS3-202ENST00000356141 IFT88Q13099 833 aa18.17■□□□□ 0.5
NPAS3-202ENST00000356141 RTP2Q5QGT7 225 aa18.17■□□□□ 0.5
NPAS3-202ENST00000356141 PACS2Q86VP3 889 aa18.17■□□□□ 0.5
NPAS3-202ENST00000356141 CAND1Q86VP6 1230 aaKnown RBP18.17■□□□□ 0.5
NPAS3-202ENST00000356141 FAM126BQ8IXS8 530 aa18.17■□□□□ 0.5
NPAS3-202ENST00000356141 VPS52Q8N1B4 723 aa18.17■□□□□ 0.5
NPAS3-202ENST00000356141 SLAIN1Q8ND83 568 aa18.17■□□□□ 0.5
NPAS3-202ENST00000356141 PXYLP1Q8TE99 480 aa18.17■□□□□ 0.5
NPAS3-202ENST00000356141 BCL7CQ8WUZ0 217 aaPredicted RBP18.17■□□□□ 0.5
NPAS3-202ENST00000356141 PAFAH2Q99487 392 aa18.17■□□□□ 0.5
NPAS3-202ENST00000356141 KLC2Q9H0B6 622 aa18.17■□□□□ 0.5
NPAS3-202ENST00000356141 RABGEF1Q9UJ41 708 aa18.17■□□□□ 0.5
NPAS3-202ENST00000356141 ATP11BQ9Y2G3 1177 aa18.17■□□□□ 0.5
NPAS3-202ENST00000356141 H3BRJ5 948 aa18.17■□□□□ 0.5
NPAS3-202ENST00000356141 ABCG1P45844 678 aa18.17■□□□□ 0.5
NPAS3-202ENST00000356141 SPNS2Q8IVW8 549 aa18.17■□□□□ 0.5
NPAS3-202ENST00000356141 ATXN7L3BQ96GX2 97 aa18.17■□□□□ 0.5
NPAS3-202ENST00000356141 PAK5Q9P286 719 aa18.17■□□□□ 0.5
NPAS3-202ENST00000356141 KLHL8Q9P2G9 620 aaPredicted RBP18.17■□□□□ 0.5
NPAS3-202ENST00000356141 TCRBV9S1A1TA0A576 114 aa18.16■□□□□ 0.5
NPAS3-202ENST00000356141 TCP11X1B4DZS4 312 aa18.16■□□□□ 0.5
NPAS3-202ENST00000356141 ADAM12O43184 909 aa18.16■□□□□ 0.5
NPAS3-202ENST00000356141 CDH16O75309 829 aa18.16■□□□□ 0.5
NPAS3-202ENST00000356141 EFEMP1Q12805 493 aa18.16■□□□□ 0.5
NPAS3-202ENST00000356141 RAB41Q5JT25 222 aa18.16■□□□□ 0.5
NPAS3-202ENST00000356141 FAM26DQ5JW98 314 aa18.16■□□□□ 0.5
NPAS3-202ENST00000356141 CIR1Q86X95 450 aaPredicted RBP18.16■□□□□ 0.5
NPAS3-202ENST00000356141 ATXN2LQ8WWM7 1075 aaKnown RBP18.16■□□□□ 0.5
NPAS3-202ENST00000356141 ELAC2Q9BQ52 826 aaKnown RBP18.16■□□□□ 0.5
NPAS3-202ENST00000356141 FAM124BQ9H5Z6 455 aaPredicted RBP18.16■□□□□ 0.5
NPAS3-202ENST00000356141 TRAPPC3O43617 180 aa18.16■□□□□ 0.5
NPAS3-202ENST00000356141 TOP3BO95985 862 aaKnown RBP18.16■□□□□ 0.5
NPAS3-202ENST00000356141 TPH1P17752 444 aa18.16■□□□□ 0.5
NPAS3-202ENST00000356141 SPOUT1Q5T280 376 aaKnown RBP18.16■□□□□ 0.5
NPAS3-202ENST00000356141 TAOK1Q7L7X3 1001 aa18.16■□□□□ 0.5
NPAS3-202ENST00000356141 SCD5Q86SK9 330 aa18.16■□□□□ 0.5
NPAS3-202ENST00000356141 SRLQ86TD4 932 aa18.16■□□□□ 0.5
NPAS3-202ENST00000356141 ZNF354CQ86Y25 554 aa18.16■□□□□ 0.5
NPAS3-202ENST00000356141 CDKL3Q8IVW4 592 aaPredicted RBP18.16■□□□□ 0.5
NPAS3-202ENST00000356141 HIPK3Q9H422 1215 aa18.16■□□□□ 0.5
NPAS3-202ENST00000356141 DONSONQ9NYP3 566 aa18.16■□□□□ 0.5
NPAS3-202ENST00000356141 GMIPQ9P107 970 aa18.16■□□□□ 0.5
NPAS3-202ENST00000356141 FBXW11Q9UKB1 542 aa18.16■□□□□ 0.5
NPAS3-202ENST00000356141 TTC24A2A3L6 582 aaPredicted RBP18.15■□□□□ 0.5
NPAS3-202ENST00000356141 WDR27A2RRH5 827 aa18.15■□□□□ 0.5
NPAS3-202ENST00000356141 KRT4P19013 534 aa18.15■□□□□ 0.5
NPAS3-202ENST00000356141 DNAJB2P25686 324 aa18.15■□□□□ 0.5
NPAS3-202ENST00000356141 RPA3P35244 121 aaPredicted RBP18.15■□□□□ 0.5
NPAS3-202ENST00000356141 DUSP4Q13115 394 aa18.15■□□□□ 0.5
NPAS3-202ENST00000356141 STAT4Q14765 748 aa18.15■□□□□ 0.5
NPAS3-202ENST00000356141 TRIM60Q495X7 471 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms