RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 FYB2Q5VWT5 728 aa11.74□□□□□ -0.53
RTN3-204ENST00000354497 PCSK4Q6UW60 755 aa11.74□□□□□ -0.53
RTN3-204ENST00000354497 STXBP4Q6ZWJ1 553 aa11.74□□□□□ -0.53
RTN3-204ENST00000354497 SPACA3Q8IXA5 215 aa11.74□□□□□ -0.53
RTN3-204ENST00000354497 FUKQ8N0W3 1084 aa11.74□□□□□ -0.53
RTN3-204ENST00000354497 ZMIZ2Q8NF64 920 aa11.74□□□□□ -0.53
RTN3-204ENST00000354497 SLC2A14Q8TDB8 520 aa11.74□□□□□ -0.53
RTN3-204ENST00000354497 SYAP1Q96A49 352 aaPredicted RBP11.74□□□□□ -0.53
RTN3-204ENST00000354497 ELMO3Q96BJ8 720 aa11.74□□□□□ -0.53
RTN3-204ENST00000354497 NRSN2Q9GZP1 204 aa11.74□□□□□ -0.53
RTN3-204ENST00000354497 FAM49BQ9NUQ9 324 aa11.74□□□□□ -0.53
RTN3-204ENST00000354497 NAGPAQ9UK23 515 aa11.74□□□□□ -0.53
RTN3-204ENST00000354497 FBXO10Q9UK96 956 aa11.74□□□□□ -0.53
RTN3-204ENST00000354497 TMEM131Q92545 1883 aa11.74□□□□□ -0.53
RTN3-204ENST00000354497 MAST4O15021 2626 aa11.73□□□□□ -0.53
RTN3-204ENST00000354497 ASXL3Q9C0F0 2248 aa11.73□□□□□ -0.53
RTN3-204ENST00000354497 A0A1B0GTQ1 180 aa11.73□□□□□ -0.53
RTN3-204ENST00000354497 PPP1R12AO14974 1030 aaPredicted RBP11.73□□□□□ -0.53
RTN3-204ENST00000354497 DFNA5O60443 496 aa11.73□□□□□ -0.53
RTN3-204ENST00000354497 STC2O76061 302 aa11.73□□□□□ -0.53
RTN3-204ENST00000354497 PENKP01210 267 aaPredicted RBP11.73□□□□□ -0.53
RTN3-204ENST00000354497 NUDT7P0C024 238 aa11.73□□□□□ -0.53
RTN3-204ENST00000354497 CDK4P11802 303 aa11.73□□□□□ -0.53
RTN3-204ENST00000354497 GJB2P29033 226 aa11.73□□□□□ -0.53
RTN3-204ENST00000354497 ACADVLP49748 655 aa11.73□□□□□ -0.53
RTN3-204ENST00000354497 KCNH2Q12809 1159 aa11.73□□□□□ -0.53
RTN3-204ENST00000354497 RTP5Q14D33 572 aa11.73□□□□□ -0.53
RTN3-204ENST00000354497 EIF4HQ15056 248 aaKnown RBP11.73□□□□□ -0.53
RTN3-204ENST00000354497 RABEP1Q15276 862 aa11.73□□□□□ -0.53
RTN3-204ENST00000354497 ZNF699Q32M78 642 aa11.73□□□□□ -0.53
RTN3-204ENST00000354497 ARHGAP40Q5TG30 622 aa11.73□□□□□ -0.53
RTN3-204ENST00000354497 BROXQ5VW32 411 aa11.73□□□□□ -0.53
RTN3-204ENST00000354497 Q6ZNB5 142 aa11.73□□□□□ -0.53
RTN3-204ENST00000354497 GPRIN1Q7Z2K8 1008 aa11.73□□□□□ -0.53
RTN3-204ENST00000354497 TXLNBQ8N3L3 684 aa11.73□□□□□ -0.53
RTN3-204ENST00000354497 KIF18AQ8NI77 898 aa11.73□□□□□ -0.53
RTN3-204ENST00000354497 DDI1Q8WTU0 396 aa11.73□□□□□ -0.53
RTN3-204ENST00000354497 HPS3Q969F9 1004 aa11.73□□□□□ -0.53
RTN3-204ENST00000354497 SLC6A18Q96N87 628 aa11.73□□□□□ -0.53
RTN3-204ENST00000354497 FAM210AQ96ND0 272 aa11.73□□□□□ -0.53
RTN3-204ENST00000354497 ELF4Q99607 663 aaPredicted RBP11.73□□□□□ -0.53
RTN3-204ENST00000354497 NMUR1Q9HB89 426 aa11.73□□□□□ -0.53
RTN3-204ENST00000354497 KIAA1586Q9HCI6 787 aa11.73□□□□□ -0.53
RTN3-204ENST00000354497 OSGEPQ9NPF4 335 aa11.73□□□□□ -0.53
RTN3-204ENST00000354497 CYLDQ9NQC7 956 aa11.73□□□□□ -0.53
RTN3-204ENST00000354497 AASDHPPTQ9NRN7 309 aa11.73□□□□□ -0.53
RTN3-204ENST00000354497 RSPH14Q9UHP6 348 aa11.73□□□□□ -0.53
RTN3-204ENST00000354497 ZNF510Q9Y2H8 683 aa11.73□□□□□ -0.53
RTN3-204ENST00000354497 ZNF462Q96JM2 2506 aa11.73□□□□□ -0.53
RTN3-204ENST00000354497 TSPAN3O60637 253 aa11.72□□□□□ -0.53
RTN3-204ENST00000354497 C1SP09871 688 aa11.72□□□□□ -0.53
RTN3-204ENST00000354497 FAM200BP0CF97 657 aa11.72□□□□□ -0.53
RTN3-204ENST00000354497 GLDCP23378 1020 aa11.72□□□□□ -0.53
RTN3-204ENST00000354497 CORO1AP31146 461 aaKnown RBP11.72□□□□□ -0.53
RTN3-204ENST00000354497 ATICP31939 592 aa11.72□□□□□ -0.53
RTN3-204ENST00000354497 CHKAP35790 457 aa11.72□□□□□ -0.53
RTN3-204ENST00000354497 PSMD6Q15008 389 aa11.72□□□□□ -0.53
RTN3-204ENST00000354497 TTC31Q49AM3 519 aaPredicted RBP11.72□□□□□ -0.53
RTN3-204ENST00000354497 ZNF667Q5HYK9 610 aa11.72□□□□□ -0.53
RTN3-204ENST00000354497 TADA2BQ86TJ2 420 aa11.72□□□□□ -0.53
RTN3-204ENST00000354497 FMNL3Q8IVF7 1028 aa11.72□□□□□ -0.53
RTN3-204ENST00000354497 CCDC65Q8IXS2 484 aa11.72□□□□□ -0.53
RTN3-204ENST00000354497 CYB5D2Q8WUJ1 264 aa11.72□□□□□ -0.53
RTN3-204ENST00000354497 SKA1Q96BD8 255 aa11.72□□□□□ -0.53
RTN3-204ENST00000354497 PIWIL1Q96J94 861 aaKnown RBP11.72□□□□□ -0.53
RTN3-204ENST00000354497 CPNE5Q9HCH3 593 aa11.72□□□□□ -0.53
RTN3-204ENST00000354497 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.72□□□□□ -0.53
RTN3-204ENST00000354497 CLEC4EQ9ULY5 219 aa11.72□□□□□ -0.53
RTN3-204ENST00000354497 SCML2Q9UQR0 700 aa11.72□□□□□ -0.53
RTN3-204ENST00000354497 GOLGA4Q13439 2230 aaKnown RBP11.72□□□□□ -0.53
RTN3-204ENST00000354497 CLIC2O15247 247 aa11.71□□□□□ -0.53
RTN3-204ENST00000354497 SLC28A2O43868 658 aa11.71□□□□□ -0.53
RTN3-204ENST00000354497 STAU1O95793 577 aaKnown RBP11.71□□□□□ -0.53
RTN3-204ENST00000354497 STAT6P42226 847 aa11.71□□□□□ -0.53
RTN3-204ENST00000354497 TMPRSS3P57727 454 aa11.71□□□□□ -0.53
RTN3-204ENST00000354497 RPS14P62263 151 aaKnown RBP11.71□□□□□ -0.53
RTN3-204ENST00000354497 RACK1P63244 317 aaKnown RBP11.71□□□□□ -0.53
RTN3-204ENST00000354497 RHDQ02161 417 aa11.71□□□□□ -0.53
RTN3-204ENST00000354497 CYP24A1Q07973 514 aa11.71□□□□□ -0.53
RTN3-204ENST00000354497 EFEMP1Q12805 493 aa11.71□□□□□ -0.53
RTN3-204ENST00000354497 LY6DQ14210 128 aa11.71□□□□□ -0.53
RTN3-204ENST00000354497 C11orf91Q3C1V1 193 aa11.71□□□□□ -0.53
RTN3-204ENST00000354497 TBC1D25Q3MII6 688 aa11.71□□□□□ -0.53
RTN3-204ENST00000354497 TMEM215Q68D42 235 aa11.71□□□□□ -0.53
RTN3-204ENST00000354497 KIAA0895LQ68EN5 471 aa11.71□□□□□ -0.53
RTN3-204ENST00000354497 FBXL19Q6PCT2 694 aa11.71□□□□□ -0.53
RTN3-204ENST00000354497 KDM7AQ6ZMT4 941 aa11.71□□□□□ -0.53
RTN3-204ENST00000354497 DENND1CQ8IV53 801 aa11.71□□□□□ -0.53
RTN3-204ENST00000354497 OTUD6BQ8N6M0 293 aa11.71□□□□□ -0.53
RTN3-204ENST00000354497 IQUBQ8NA54 791 aa11.71□□□□□ -0.53
RTN3-204ENST00000354497 DCLK3Q9C098 648 aa11.71□□□□□ -0.53
RTN3-204ENST00000354497 SEMA4CQ9C0C4 833 aa11.71□□□□□ -0.53
RTN3-204ENST00000354497 SDCBP2Q9H190 292 aa11.71□□□□□ -0.53
RTN3-204ENST00000354497 RBSNQ9H1K0 784 aa11.71□□□□□ -0.53
RTN3-204ENST00000354497 SGK2Q9HBY8 427 aa11.71□□□□□ -0.53
RTN3-204ENST00000354497 CWC15Q9P013 229 aaKnown RBP11.71□□□□□ -0.53
RTN3-204ENST00000354497 PLA2G4CQ9UP65 541 aa11.71□□□□□ -0.53
RTN3-204ENST00000354497 NCKAP1Q9Y2A7 1128 aa11.71□□□□□ -0.53
RTN3-204ENST00000354497 VILLO15195 856 aa11.7□□□□□ -0.54
RTN3-204ENST00000354497 PAPSS1O43252 624 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms