RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 TEX28O15482 410 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 PPFIA2O75334 1257 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 PAGE1O75459 146 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 APOEP02649 317 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 ETS1P14921 441 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 ERCC2P18074 760 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 CTNNB1P35222 781 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 KPNA1P52294 538 aaPredicted RBP19.29■□□□□ 0.68
PTN-201ENST00000348225 PLD1Q13393 1074 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 SLMAPQ14BN4 828 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 TRIP4Q15650 581 aaPredicted RBP19.29■□□□□ 0.68
PTN-201ENST00000348225 ALS2CLQ60I27 953 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 CEP128Q6ZU80 1094 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 PRUNE1Q86TP1 453 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 ZNF276Q8N554 614 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 RTP4Q96DX8 246 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 TRMT2BQ96GJ1 504 aaKnown RBP19.29■□□□□ 0.68
PTN-201ENST00000348225 SLC39A13Q96H72 371 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 ZNF512Q96ME7 567 aaPredicted RBP19.29■□□□□ 0.68
PTN-201ENST00000348225 QKIQ96PU8 341 aaKnown RBP eCLIP19.29■□□□□ 0.68
PTN-201ENST00000348225 FERMT1Q9BQL6 677 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 FOXP3Q9BZS1 431 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 C10orf88Q9H8K7 445 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 OGFRQ9NZT2 677 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 MARCH2Q9P0N8 246 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 SLC12A6Q9UHW9 1150 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 LZTS1Q9Y250 596 aa19.29■□□□□ 0.68
PTN-201ENST00000348225 KCNU1A8MYU2 1149 aa19.28■□□□□ 0.68
PTN-201ENST00000348225 PPP1R12AO14974 1030 aaPredicted RBP19.28■□□□□ 0.68
PTN-201ENST00000348225 KCNN4O15554 427 aa19.28■□□□□ 0.68
PTN-201ENST00000348225 MFSD11O43934 449 aa19.28■□□□□ 0.68
PTN-201ENST00000348225 TLR5O60602 858 aa19.28■□□□□ 0.68
PTN-201ENST00000348225 LRIG2O94898 1065 aa19.28■□□□□ 0.68
PTN-201ENST00000348225 EPHB2P29323 1055 aa19.28■□□□□ 0.68
PTN-201ENST00000348225 SERPINB6P35237 376 aa19.28■□□□□ 0.68
PTN-201ENST00000348225 EPHB3P54753 998 aa19.28■□□□□ 0.68
PTN-201ENST00000348225 MTA1Q13330 715 aa19.28■□□□□ 0.68
PTN-201ENST00000348225 PDK1Q15118 436 aa19.28■□□□□ 0.68
PTN-201ENST00000348225 CFAP58Q5T655 872 aa19.28■□□□□ 0.68
PTN-201ENST00000348225 SNX30Q5VWJ9 437 aa19.28■□□□□ 0.68
PTN-201ENST00000348225 HIBCHQ6NVY1 386 aaPredicted RBP19.28■□□□□ 0.68
PTN-201ENST00000348225 RHBDF2Q6PJF5 856 aa19.28■□□□□ 0.68
PTN-201ENST00000348225 MYRFLQ96LU7 910 aa19.28■□□□□ 0.68
PTN-201ENST00000348225 OLFM3Q96PB7 478 aa19.28■□□□□ 0.68
PTN-201ENST00000348225 RUFY1Q96T51 708 aa19.28■□□□□ 0.68
PTN-201ENST00000348225 FAM53CQ9NYF3 392 aa19.28■□□□□ 0.68
PTN-201ENST00000348225 PLXNA4Q9HCM2 1894 aa19.28■□□□□ 0.68
PTN-201ENST00000348225 RBL1P28749 1068 aa19.27■□□□□ 0.68
PTN-201ENST00000348225 RPL22P35268 128 aaKnown RBP19.27■□□□□ 0.68
PTN-201ENST00000348225 BMPR1AP36894 532 aa19.27■□□□□ 0.68
PTN-201ENST00000348225 NRG1Q02297 640 aaPredicted RBP19.27■□□□□ 0.68
PTN-201ENST00000348225 TWF1Q12792 350 aa19.27■□□□□ 0.68
PTN-201ENST00000348225 SLC10A2Q12908 348 aaPredicted RBP19.27■□□□□ 0.68
PTN-201ENST00000348225 MORF4L2Q15014 288 aa19.27■□□□□ 0.68
PTN-201ENST00000348225 ACBD5Q5T8D3 534 aaPredicted RBP19.27■□□□□ 0.68
PTN-201ENST00000348225 C4orf22Q6V702 233 aa19.27■□□□□ 0.68
PTN-201ENST00000348225 TMC7Q7Z402 723 aa19.27■□□□□ 0.68
PTN-201ENST00000348225 ATP6V0D2Q8N8Y2 350 aa19.27■□□□□ 0.68
PTN-201ENST00000348225 TFB1MQ8WVM0 346 aaKnown RBP19.27■□□□□ 0.68
PTN-201ENST00000348225 FCRL2Q96LA5 508 aaPredicted RBP19.27■□□□□ 0.68
PTN-201ENST00000348225 SIK2Q9H0K1 926 aa19.27■□□□□ 0.68
PTN-201ENST00000348225 USP29Q9HBJ7 922 aa19.27■□□□□ 0.68
PTN-201ENST00000348225 TRPM5Q9NZQ8 1165 aa19.27■□□□□ 0.68
PTN-201ENST00000348225 PAK5Q9P286 719 aa19.27■□□□□ 0.68
PTN-201ENST00000348225 UXTQ9UBK9 157 aaPredicted RBP19.27■□□□□ 0.68
PTN-201ENST00000348225 ATP8A1Q9Y2Q0 1164 aa19.27■□□□□ 0.68
PTN-201ENST00000348225 MFHAS1Q9Y4C4 1052 aa19.27■□□□□ 0.68
PTN-201ENST00000348225 INSL5Q9Y5Q6 135 aa19.27■□□□□ 0.68
PTN-201ENST00000348225 SNX10Q9Y5X0 201 aa19.27■□□□□ 0.68
PTN-201ENST00000348225 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.26■□□□□ 0.67
PTN-201ENST00000348225 SMAPO00193 183 aa19.26■□□□□ 0.67
PTN-201ENST00000348225 TP73O15350 636 aa19.26■□□□□ 0.67
PTN-201ENST00000348225 NCAM2O15394 837 aa19.26■□□□□ 0.67
PTN-201ENST00000348225 FGF10O15520 208 aaPredicted RBP19.26■□□□□ 0.67
PTN-201ENST00000348225 MAP3K6O95382 1288 aa19.26■□□□□ 0.67
PTN-201ENST00000348225 CXCL14O95715 111 aa19.26■□□□□ 0.67
PTN-201ENST00000348225 MOCS2O96007 188 aaPredicted RBP19.26■□□□□ 0.67
PTN-201ENST00000348225 ADH1AP07327 375 aa19.26■□□□□ 0.67
PTN-201ENST00000348225 HMGA1P17096 107 aaKnown RBP19.26■□□□□ 0.67
PTN-201ENST00000348225 PPP3CCP48454 512 aa19.26■□□□□ 0.67
PTN-201ENST00000348225 HEATR6Q6AI08 1181 aaKnown RBP19.26■□□□□ 0.67
PTN-201ENST00000348225 ITIH5Q86UX2 942 aa19.26■□□□□ 0.67
PTN-201ENST00000348225 MIB1Q86YT6 1006 aa19.26■□□□□ 0.67
PTN-201ENST00000348225 KRT222Q8N1A0 295 aa19.26■□□□□ 0.67
PTN-201ENST00000348225 UBLCP1Q8WVY7 318 aaPredicted RBP19.26■□□□□ 0.67
PTN-201ENST00000348225 TBC1D31Q96DN5 1066 aa19.26■□□□□ 0.67
PTN-201ENST00000348225 C1orf74Q96LT6 269 aa19.26■□□□□ 0.67
PTN-201ENST00000348225 EMILIN2Q9BXX0 1053 aa19.26■□□□□ 0.67
PTN-201ENST00000348225 TXLNGYQ9BZA5 131 aa19.26■□□□□ 0.67
PTN-201ENST00000348225 CATSPERBQ9H7T0 1116 aa19.26■□□□□ 0.67
PTN-201ENST00000348225 SHOC2Q9UQ13 582 aa19.26■□□□□ 0.67
PTN-201ENST00000348225 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.25■□□□□ 0.67
PTN-201ENST00000348225 SLC12A8A0AV02 714 aa19.25■□□□□ 0.67
PTN-201ENST00000348225 LCHNA4D1U4 455 aa19.25■□□□□ 0.67
PTN-201ENST00000348225 TBX18O95935 607 aa19.25■□□□□ 0.67
PTN-201ENST00000348225 CNPP09543 421 aaKnown RBP19.25■□□□□ 0.67
PTN-201ENST00000348225 HOXC13P31276 330 aa19.25■□□□□ 0.67
PTN-201ENST00000348225 HSD17B3P37058 310 aa19.25■□□□□ 0.67
PTN-201ENST00000348225 PMS2P54278 862 aa19.25■□□□□ 0.67
PTN-201ENST00000348225 RING1Q06587 406 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms