RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 PKDCCQ504Y2 493 aa12.94□□□□□ -0.34
SGCA-202ENST00000344627 FOXR2Q6PJQ5 311 aa12.94□□□□□ -0.34
SGCA-202ENST00000344627 FAM217AQ8IXS0 508 aa12.94□□□□□ -0.34
SGCA-202ENST00000344627 LMO3Q8TAP4 145 aa12.94□□□□□ -0.34
SGCA-202ENST00000344627 WFIKKN2Q8TEU8 576 aa12.94□□□□□ -0.34
SGCA-202ENST00000344627 SLC35F5Q8WV83 523 aa12.94□□□□□ -0.34
SGCA-202ENST00000344627 PRCCQ92733 491 aaPredicted RBP12.94□□□□□ -0.34
SGCA-202ENST00000344627 KREMEN1Q96MU8 473 aa12.94□□□□□ -0.34
SGCA-202ENST00000344627 NUP58Q9BVL2 599 aa12.94□□□□□ -0.34
SGCA-202ENST00000344627 SLC6A17Q9H1V8 727 aa12.94□□□□□ -0.34
SGCA-202ENST00000344627 WSB2Q9NYS7 404 aaPredicted RBP12.94□□□□□ -0.34
SGCA-202ENST00000344627 CHMP5Q9NZZ3 219 aa12.94□□□□□ -0.34
SGCA-202ENST00000344627 CHD8Q9HCK8 2581 aa12.93□□□□□ -0.34
SGCA-202ENST00000344627 ATXN2Q99700 1313 aaKnown RBP12.93□□□□□ -0.34
SGCA-202ENST00000344627 THAP12O43422 761 aa12.93□□□□□ -0.34
SGCA-202ENST00000344627 LETM1O95202 739 aaPredicted RBP12.93□□□□□ -0.34
SGCA-202ENST00000344627 CER1O95813 267 aa12.93□□□□□ -0.34
SGCA-202ENST00000344627 LTFP02788 710 aa12.93□□□□□ -0.34
SGCA-202ENST00000344627 ACADMP11310 421 aa12.93□□□□□ -0.34
SGCA-202ENST00000344627 MTIF2P46199 727 aaKnown RBP12.93□□□□□ -0.34
SGCA-202ENST00000344627 GCNT1Q02742 428 aa12.93□□□□□ -0.34
SGCA-202ENST00000344627 ZBTB16Q05516 673 aa12.93□□□□□ -0.34
SGCA-202ENST00000344627 SFSWAPQ12872 951 aaKnown RBP12.93□□□□□ -0.34
SGCA-202ENST00000344627 ARHGAP44Q17R89 818 aa12.93□□□□□ -0.34
SGCA-202ENST00000344627 MPPE1Q53F39 396 aa12.93□□□□□ -0.34
SGCA-202ENST00000344627 GLRX5Q86SX6 157 aa12.93□□□□□ -0.34
SGCA-202ENST00000344627 SLC41A1Q8IVJ1 513 aa12.93□□□□□ -0.34
SGCA-202ENST00000344627 SCML4Q8N228 414 aa12.93□□□□□ -0.34
SGCA-202ENST00000344627 CLEC4CQ8WTT0 213 aa12.93□□□□□ -0.34
SGCA-202ENST00000344627 IRGQQ8WZA9 623 aa12.93□□□□□ -0.34
SGCA-202ENST00000344627 FAM149B1Q96BN6 582 aa12.93□□□□□ -0.34
SGCA-202ENST00000344627 TMA16Q96EY4 203 aaKnown RBP12.93□□□□□ -0.34
SGCA-202ENST00000344627 P2RY11Q96G91 374 aa12.93□□□□□ -0.34
SGCA-202ENST00000344627 HSFY1Q96LI6 401 aa12.93□□□□□ -0.34
SGCA-202ENST00000344627 ZSWIM1Q9BR11 485 aa12.93□□□□□ -0.34
SGCA-202ENST00000344627 OSGEPQ9NPF4 335 aa12.93□□□□□ -0.34
SGCA-202ENST00000344627 ELOVL2Q9NXB9 296 aa12.93□□□□□ -0.34
SGCA-202ENST00000344627 KIAA1522Q9P206 1035 aaPredicted RBP12.93□□□□□ -0.34
SGCA-202ENST00000344627 RWDD2AQ9UIY3 292 aa12.93□□□□□ -0.34
SGCA-202ENST00000344627 CLEC4EQ9ULY5 219 aa12.93□□□□□ -0.34
SGCA-202ENST00000344627 APOBEC2Q9Y235 224 aaKnown RBP12.93□□□□□ -0.34
SGCA-202ENST00000344627 PCDHGB2Q9Y5G2 931 aa12.93□□□□□ -0.34
SGCA-202ENST00000344627 ADAMTS9Q9P2N4 1935 aa12.92□□□□□ -0.34
SGCA-202ENST00000344627 MED7O43513 233 aa12.92□□□□□ -0.34
SGCA-202ENST00000344627 GJB3O75712 270 aa12.92□□□□□ -0.34
SGCA-202ENST00000344627 GABBR2O75899 941 aa12.92□□□□□ -0.34
SGCA-202ENST00000344627 FBXO21O94952 628 aa12.92□□□□□ -0.34
SGCA-202ENST00000344627 NCAM1P13591 858 aa12.92□□□□□ -0.34
SGCA-202ENST00000344627 CD59P13987 128 aa12.92□□□□□ -0.34
SGCA-202ENST00000344627 IL12RB1P42701 662 aa12.92□□□□□ -0.34
SGCA-202ENST00000344627 SLC11A2P49281 568 aa12.92□□□□□ -0.34
SGCA-202ENST00000344627 MARSP56192 900 aaKnown RBP12.92□□□□□ -0.34
SGCA-202ENST00000344627 TBX4P57082 545 aa12.92□□□□□ -0.34
SGCA-202ENST00000344627 SUZ12Q15022 739 aaKnown RBP12.92□□□□□ -0.34
SGCA-202ENST00000344627 TRIP6Q15654 476 aaKnown RBP12.92□□□□□ -0.34
SGCA-202ENST00000344627 FUT11Q495W5 492 aa12.92□□□□□ -0.34
SGCA-202ENST00000344627 FNDC3BQ53EP0 1204 aaKnown RBP12.92□□□□□ -0.34
SGCA-202ENST00000344627 MPP7Q5T2T1 576 aa12.92□□□□□ -0.34
SGCA-202ENST00000344627 ADGRF1Q5T601 910 aa12.92□□□□□ -0.34
SGCA-202ENST00000344627 DENND1BQ6P3S1 775 aa12.92□□□□□ -0.34
SGCA-202ENST00000344627 RAB44Q7Z6P3 723 aaPredicted RBP12.92□□□□□ -0.34
SGCA-202ENST00000344627 TMPRSS6Q8IU80 811 aa12.92□□□□□ -0.34
SGCA-202ENST00000344627 UNC45BQ8IWX7 931 aa12.92□□□□□ -0.34
SGCA-202ENST00000344627 SCUBE3Q8IX30 993 aa12.92□□□□□ -0.34
SGCA-202ENST00000344627 ADAMTS14Q8WXS8 1223 aa12.92□□□□□ -0.34
SGCA-202ENST00000344627 SORCS1Q8WY21 1168 aa12.92□□□□□ -0.34
SGCA-202ENST00000344627 ZCCHC14Q8WYQ9 949 aaKnown RBP12.92□□□□□ -0.34
SGCA-202ENST00000344627 SIPA1Q96FS4 1042 aa12.92□□□□□ -0.34
SGCA-202ENST00000344627 PIWIL1Q96J94 861 aaKnown RBP12.92□□□□□ -0.34
SGCA-202ENST00000344627 STIM2Q9P246 746 aa12.92□□□□□ -0.34
SGCA-202ENST00000344627 STOML2Q9UJZ1 356 aa12.92□□□□□ -0.34
SGCA-202ENST00000344627 MAP1BP46821 2468 aaKnown RBP12.91□□□□□ -0.34
SGCA-202ENST00000344627 GOLGA6L7A0A1B0GV03 622 aa12.91□□□□□ -0.34
SGCA-202ENST00000344627 METTL12A8MUP2 240 aa12.91□□□□□ -0.34
SGCA-202ENST00000344627 MEI4A8MW99 385 aa12.91□□□□□ -0.34
SGCA-202ENST00000344627 CAPN9O14815 690 aa12.91□□□□□ -0.34
SGCA-202ENST00000344627 IRAK2O43187 625 aa12.91□□□□□ -0.34
SGCA-202ENST00000344627 TBL1XO60907 577 aa12.91□□□□□ -0.34
SGCA-202ENST00000344627 HOXD9P28356 352 aaPredicted RBP12.91□□□□□ -0.34
SGCA-202ENST00000344627 GNA15P30679 374 aa12.91□□□□□ -0.34
SGCA-202ENST00000344627 ACADSBP45954 432 aa12.91□□□□□ -0.34
SGCA-202ENST00000344627 ZNF234Q14588 700 aa12.91□□□□□ -0.34
SGCA-202ENST00000344627 NUGGCQ68CJ6 796 aa12.91□□□□□ -0.34
SGCA-202ENST00000344627 MSANTD2Q6P1R3 559 aa12.91□□□□□ -0.34
SGCA-202ENST00000344627 RFWD3Q6PCD5 774 aa12.91□□□□□ -0.34
SGCA-202ENST00000344627 GJB7Q6PEY0 223 aa12.91□□□□□ -0.34
SGCA-202ENST00000344627 SERPINA13PQ6UXR4 307 aa12.91□□□□□ -0.34
SGCA-202ENST00000344627 GBP6Q6ZN66 633 aa12.91□□□□□ -0.34
SGCA-202ENST00000344627 ENOSF1Q7L5Y1 443 aa12.91□□□□□ -0.34
SGCA-202ENST00000344627 CACUL1Q86Y37 369 aa12.91□□□□□ -0.34
SGCA-202ENST00000344627 TOE1Q96GM8 510 aaKnown RBP12.91□□□□□ -0.34
SGCA-202ENST00000344627 CDC6Q99741 560 aa12.91□□□□□ -0.34
SGCA-202ENST00000344627 TPX2Q9ULW0 747 aaKnown RBP12.91□□□□□ -0.34
SGCA-202ENST00000344627 SCML1Q9UN30 329 aa12.91□□□□□ -0.34
SGCA-202ENST00000344627 PLA2G4CQ9UP65 541 aa12.91□□□□□ -0.34
SGCA-202ENST00000344627 USP24Q9UPU5 2620 aa12.91□□□□□ -0.34
SGCA-202ENST00000344627 ASCC3Q8N3C0 2202 aaKnown RBP12.9□□□□□ -0.34
SGCA-202ENST00000344627 TNRC6BQ9UPQ9 1833 aaKnown RBP12.9□□□□□ -0.34
SGCA-202ENST00000344627 PES1O00541 588 aaKnown RBP12.9□□□□□ -0.34
SGCA-202ENST00000344627 BCAT2O15382 392 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms