RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 BFSP2Q13515 415 aa19.2■□□□□ 0.66
HOXA9-201ENST00000343483 DPYSQ14117 519 aa19.2■□□□□ 0.66
HOXA9-201ENST00000343483 ARHGEF18Q6ZSZ5 1173 aa19.2■□□□□ 0.66
HOXA9-201ENST00000343483 TDRPQ86YL5 185 aa19.2■□□□□ 0.66
HOXA9-201ENST00000343483 FAM126BQ8IXS8 530 aa19.2■□□□□ 0.66
HOXA9-201ENST00000343483 DBF4BQ8NFT6 615 aa19.2■□□□□ 0.66
HOXA9-201ENST00000343483 CKAP2Q8WWK9 683 aa19.2■□□□□ 0.66
HOXA9-201ENST00000343483 HTR3CQ8WXA8 447 aa19.2■□□□□ 0.66
HOXA9-201ENST00000343483 CCT6BQ92526 530 aa19.2■□□□□ 0.66
HOXA9-201ENST00000343483 WDCPQ9H6R7 721 aa19.2■□□□□ 0.66
HOXA9-201ENST00000343483 PRDM16Q9HAZ2 1276 aa19.2■□□□□ 0.66
HOXA9-201ENST00000343483 PNPLA8Q9NP80 782 aa19.2■□□□□ 0.66
HOXA9-201ENST00000343483 ABI2Q9NYB9 513 aaPredicted RBP19.2■□□□□ 0.66
HOXA9-201ENST00000343483 FRMPD3Q5JV73 1810 aa19.2■□□□□ 0.66
HOXA9-201ENST00000343483 TADA2AO75478 443 aa19.2■□□□□ 0.66
HOXA9-201ENST00000343483 METTL18O95568 372 aa19.2■□□□□ 0.66
HOXA9-201ENST00000343483 VAV1P15498 845 aa19.2■□□□□ 0.66
HOXA9-201ENST00000343483 STX2P32856 288 aa19.2■□□□□ 0.66
HOXA9-201ENST00000343483 SLC5A3P53794 718 aa19.2■□□□□ 0.66
HOXA9-201ENST00000343483 AP1B1Q10567 949 aa19.2■□□□□ 0.66
HOXA9-201ENST00000343483 SCAPQ12770 1279 aa19.2■□□□□ 0.66
HOXA9-201ENST00000343483 TAC4Q86UU9 113 aa19.2■□□□□ 0.66
HOXA9-201ENST00000343483 KDM4CQ9H3R0 1056 aa19.2■□□□□ 0.66
HOXA9-201ENST00000343483 CCT8L1PA6NM43 557 aa19.19■□□□□ 0.66
HOXA9-201ENST00000343483 HACD1B0YJ81 288 aa19.19■□□□□ 0.66
HOXA9-201ENST00000343483 TMEM189-UBE2V1I3L0A0 370 aa19.19■□□□□ 0.66
HOXA9-201ENST00000343483 CDK7P50613 346 aa19.19■□□□□ 0.66
HOXA9-201ENST00000343483 TPI1P60174 286 aa19.19■□□□□ 0.66
HOXA9-201ENST00000343483 EFTUD2Q15029 972 aaKnown RBP eCLIP19.19■□□□□ 0.66
HOXA9-201ENST00000343483 SPRED3Q2MJR0 410 aa19.19■□□□□ 0.66
HOXA9-201ENST00000343483 FBXW10Q5XX13 1052 aa19.19■□□□□ 0.66
HOXA9-201ENST00000343483 C4orf22Q6V702 233 aa19.19■□□□□ 0.66
HOXA9-201ENST00000343483 IGDCC3Q8IVU1 814 aa19.19■□□□□ 0.66
HOXA9-201ENST00000343483 SCN4BQ8IWT1 228 aa19.19■□□□□ 0.66
HOXA9-201ENST00000343483 CCNYQ8ND76 341 aa19.19■□□□□ 0.66
HOXA9-201ENST00000343483 FBF1Q8TES7 1133 aa19.19■□□□□ 0.66
HOXA9-201ENST00000343483 RNF34Q969K3 372 aa19.19■□□□□ 0.66
HOXA9-201ENST00000343483 TKTL2Q9H0I9 626 aa19.19■□□□□ 0.66
HOXA9-201ENST00000343483 FGFR1OP2Q9NVK5 253 aa19.19■□□□□ 0.66
HOXA9-201ENST00000343483 RABGEF1Q9UJ41 708 aa19.19■□□□□ 0.66
HOXA9-201ENST00000343483 PCDHB7Q9Y5E2 793 aa19.19■□□□□ 0.66
HOXA9-201ENST00000343483 DNM1LO00429 736 aa19.18■□□□□ 0.66
HOXA9-201ENST00000343483 ENPP3O14638 875 aa19.18■□□□□ 0.66
HOXA9-201ENST00000343483 PIAS1O75925 651 aa19.18■□□□□ 0.66
HOXA9-201ENST00000343483 ATP2A2P16615 1042 aaKnown RBP19.18■□□□□ 0.66
HOXA9-201ENST00000343483 GEMIN4P57678 1058 aaKnown RBP19.18■□□□□ 0.66
HOXA9-201ENST00000343483 LACTB2Q53H82 288 aaPredicted RBP19.18■□□□□ 0.66
HOXA9-201ENST00000343483 TRABD2AQ86V40 505 aa19.18■□□□□ 0.66
HOXA9-201ENST00000343483 PAK6Q9NQU5 681 aaPredicted RBP19.18■□□□□ 0.66
HOXA9-201ENST00000343483 F5H423 210 aaPredicted RBP19.18■□□□□ 0.66
HOXA9-201ENST00000343483 OAZ2O95190 189 aa19.18■□□□□ 0.66
HOXA9-201ENST00000343483 CXCR3P49682 368 aa19.18■□□□□ 0.66
HOXA9-201ENST00000343483 GATMP50440 423 aa19.18■□□□□ 0.66
HOXA9-201ENST00000343483 GPNMBQ14956 572 aa19.18■□□□□ 0.66
HOXA9-201ENST00000343483 PDK1Q15118 436 aa19.18■□□□□ 0.66
HOXA9-201ENST00000343483 NUGGCQ68CJ6 796 aa19.18■□□□□ 0.66
HOXA9-201ENST00000343483 DENND5BQ6ZUT9 1274 aa19.18■□□□□ 0.66
HOXA9-201ENST00000343483 CEP57Q86XR8 500 aa19.18■□□□□ 0.66
HOXA9-201ENST00000343483 CNPY4Q8N129 248 aa19.18■□□□□ 0.66
HOXA9-201ENST00000343483 SCML4Q8N228 414 aa19.18■□□□□ 0.66
HOXA9-201ENST00000343483 DQX1Q8TE96 717 aaKnown RBP19.18■□□□□ 0.66
HOXA9-201ENST00000343483 TRIM62Q9BVG3 475 aa19.18■□□□□ 0.66
HOXA9-201ENST00000343483 TMEM106CQ9BVX2 250 aa19.18■□□□□ 0.66
HOXA9-201ENST00000343483 SEPT10Q9P0V9 454 aa19.18■□□□□ 0.66
HOXA9-201ENST00000343483 SF3B1O75533 1304 aaKnown RBP eCLIP19.17■□□□□ 0.66
HOXA9-201ENST00000343483 FAM47DPA6NHR8 397 aa19.17■□□□□ 0.66
HOXA9-201ENST00000343483 DCLK1O15075 740 aa19.17■□□□□ 0.66
HOXA9-201ENST00000343483 SNX3O60493 162 aa19.17■□□□□ 0.66
HOXA9-201ENST00000343483 PQBP1O60828 265 aaKnown RBP19.17■□□□□ 0.66
HOXA9-201ENST00000343483 ERCC2P18074 760 aa19.17■□□□□ 0.66
HOXA9-201ENST00000343483 KRT15P19012 456 aa19.17■□□□□ 0.66
HOXA9-201ENST00000343483 MAGEA6P43360 314 aa19.17■□□□□ 0.66
HOXA9-201ENST00000343483 YWHAGP61981 247 aaKnown RBP eCLIP19.17■□□□□ 0.66
HOXA9-201ENST00000343483 SEMA3BQ13214 749 aa19.17■□□□□ 0.66
HOXA9-201ENST00000343483 PAFAH1B3Q15102 231 aaKnown RBP19.17■□□□□ 0.66
HOXA9-201ENST00000343483 PLEKHG4Q58EX7 1191 aa19.17■□□□□ 0.66
HOXA9-201ENST00000343483 DCP1BQ8IZD4 617 aaKnown RBP19.17■□□□□ 0.66
HOXA9-201ENST00000343483 TGS1Q96RS0 853 aaKnown RBP19.17■□□□□ 0.66
HOXA9-201ENST00000343483 FRMD8Q9BZ67 464 aaPredicted RBP19.17■□□□□ 0.66
HOXA9-201ENST00000343483 ZCWPW1Q9H0M4 648 aa19.17■□□□□ 0.66
HOXA9-201ENST00000343483 ACSS3Q9H6R3 686 aa19.17■□□□□ 0.66
HOXA9-201ENST00000343483 PPCSQ9HAB8 311 aa19.17■□□□□ 0.66
HOXA9-201ENST00000343483 PSMC3IPQ9P2W1 217 aaPredicted RBP19.17■□□□□ 0.66
HOXA9-201ENST00000343483 SLC24A2Q9UI40 661 aa19.17■□□□□ 0.66
HOXA9-201ENST00000343483 SNX10Q9Y5X0 201 aa19.17■□□□□ 0.66
HOXA9-201ENST00000343483 TEX264Q9Y6I9 313 aa19.17■□□□□ 0.66
HOXA9-201ENST00000343483 A0A0A0MRY4 1105 aa19.16■□□□□ 0.66
HOXA9-201ENST00000343483 RNF103O00237 685 aa19.16■□□□□ 0.66
HOXA9-201ENST00000343483 PPP1R12AO14974 1030 aaPredicted RBP19.16■□□□□ 0.66
HOXA9-201ENST00000343483 STK10O94804 968 aaKnown RBP19.16■□□□□ 0.66
HOXA9-201ENST00000343483 COL6A1P12109 1028 aa19.16■□□□□ 0.66
HOXA9-201ENST00000343483 PRKD1Q15139 912 aaPredicted RBP19.16■□□□□ 0.66
HOXA9-201ENST00000343483 KLHL38Q2WGJ6 581 aa19.16■□□□□ 0.66
HOXA9-201ENST00000343483 ANKRD20A2Q5SQ80 823 aa19.16■□□□□ 0.66
HOXA9-201ENST00000343483 VARS2Q5ST30 1063 aaKnown RBP19.16■□□□□ 0.66
HOXA9-201ENST00000343483 ANKRD20A1Q5TYW2 823 aa19.16■□□□□ 0.66
HOXA9-201ENST00000343483 ANKRD20A3Q5VUR7 823 aa19.16■□□□□ 0.66
HOXA9-201ENST00000343483 CAND1Q86VP6 1230 aaKnown RBP19.16■□□□□ 0.66
HOXA9-201ENST00000343483 TP53INP2Q8IXH6 220 aa19.16■□□□□ 0.66
HOXA9-201ENST00000343483 AGGF1Q8N302 714 aaeCLIP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms