RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 AARS2Q5JTZ9 985 aaKnown RBP19.01■□□□□ 0.63
SMPD1-201ENST00000342245 TTC33Q6PID6 262 aaPredicted RBP19.01■□□□□ 0.63
SMPD1-201ENST00000342245 CELF1Q92879 486 aaKnown RBP19.01■□□□□ 0.63
SMPD1-201ENST00000342245 HACD3Q9P035 362 aa19.01■□□□□ 0.63
SMPD1-201ENST00000342245 PCDHA1Q9Y5I3 950 aa19.01■□□□□ 0.63
SMPD1-201ENST00000342245 CPQQ9Y646 472 aa19.01■□□□□ 0.63
SMPD1-201ENST00000342245 TCRBV7S3A2A0A539 114 aa19.01■□□□□ 0.63
SMPD1-201ENST00000342245 RNASEH2AO75792 299 aaKnown RBP19.01■□□□□ 0.63
SMPD1-201ENST00000342245 HSPA8P11142 646 aaKnown RBP19.01■□□□□ 0.63
SMPD1-201ENST00000342245 HARS2P49590 506 aaKnown RBP19.01■□□□□ 0.63
SMPD1-201ENST00000342245 BASP1P80723 227 aaKnown RBP19.01■□□□□ 0.63
SMPD1-201ENST00000342245 LSM14AQ8ND56 463 aaKnown RBP19.01■□□□□ 0.63
SMPD1-201ENST00000342245 C11orf70Q9BRQ4 267 aa19.01■□□□□ 0.63
SMPD1-201ENST00000342245 AIM2O14862 343 aa19■□□□□ 0.63
SMPD1-201ENST00000342245 CHADO15335 359 aa19■□□□□ 0.63
SMPD1-201ENST00000342245 GLRA3O75311 464 aa19■□□□□ 0.63
SMPD1-201ENST00000342245 CAPN15O75808 1086 aa19■□□□□ 0.63
SMPD1-201ENST00000342245 TMBIM6P55061 237 aa19■□□□□ 0.63
SMPD1-201ENST00000342245 PEX3P56589 373 aa19■□□□□ 0.63
SMPD1-201ENST00000342245 PSMC5P62195 406 aa19■□□□□ 0.63
SMPD1-201ENST00000342245 OTUD4Q01804 1114 aaKnown RBP19■□□□□ 0.63
SMPD1-201ENST00000342245 BNIP3Q12983 259 aa19■□□□□ 0.63
SMPD1-201ENST00000342245 DPYSL3Q14195 570 aa19■□□□□ 0.63
SMPD1-201ENST00000342245 ZNF846Q147U1 533 aa19■□□□□ 0.63
SMPD1-201ENST00000342245 ATP13A4Q4VNC1 1196 aa19■□□□□ 0.63
SMPD1-201ENST00000342245 IRAK1BP1Q5VVH5 260 aa19■□□□□ 0.63
SMPD1-201ENST00000342245 VASH1Q7L8A9 365 aaPredicted RBP19■□□□□ 0.63
SMPD1-201ENST00000342245 MMAAQ8IVH4 418 aaKnown RBP19■□□□□ 0.63
SMPD1-201ENST00000342245 PACRGLQ8N7B6 248 aa19■□□□□ 0.63
SMPD1-201ENST00000342245 GRIN3AQ8TCU5 1115 aa19■□□□□ 0.63
SMPD1-201ENST00000342245 CBWD1Q9BRT8 395 aa19■□□□□ 0.63
SMPD1-201ENST00000342245 KLHL25Q9H0H3 589 aa19■□□□□ 0.63
SMPD1-201ENST00000342245 CDH19Q9H159 772 aa19■□□□□ 0.63
SMPD1-201ENST00000342245 ANKMY1Q9P2S6 941 aa19■□□□□ 0.63
SMPD1-201ENST00000342245 IVNS1ABPQ9Y6Y0 642 aa19■□□□□ 0.63
SMPD1-201ENST00000342245 IGKV6D-41A0A0C4DH26 115 aa19■□□□□ 0.63
SMPD1-201ENST00000342245 FAM86B1E9PN63 330 aa19■□□□□ 0.63
SMPD1-201ENST00000342245 C6orf229H3BNL8 230 aa19■□□□□ 0.63
SMPD1-201ENST00000342245 MEIS2O14770 477 aa19■□□□□ 0.63
SMPD1-201ENST00000342245 HTRA2O43464 458 aaPredicted RBP19■□□□□ 0.63
SMPD1-201ENST00000342245 LYPLA1O75608 230 aaPredicted RBP19■□□□□ 0.63
SMPD1-201ENST00000342245 FAM86B2P0C5J1 330 aa19■□□□□ 0.63
SMPD1-201ENST00000342245 P4HA1P13674 534 aa19■□□□□ 0.63
SMPD1-201ENST00000342245 CCNA2P20248 432 aa19■□□□□ 0.63
SMPD1-201ENST00000342245 ENPEPQ07075 957 aa19■□□□□ 0.63
SMPD1-201ENST00000342245 E2F2Q14209 437 aa19■□□□□ 0.63
SMPD1-201ENST00000342245 HERC3Q15034 1050 aa19■□□□□ 0.63
SMPD1-201ENST00000342245 FGD3Q5JSP0 725 aa19■□□□□ 0.63
SMPD1-201ENST00000342245 C11orf74Q86VG3 221 aa19■□□□□ 0.63
SMPD1-201ENST00000342245 ACTL9Q8TC94 416 aa19■□□□□ 0.63
SMPD1-201ENST00000342245 HPS1Q92902 700 aa19■□□□□ 0.63
SMPD1-201ENST00000342245 ZNF347Q96SE7 839 aa19■□□□□ 0.63
SMPD1-201ENST00000342245 EFHD1Q9BUP0 239 aa19■□□□□ 0.63
SMPD1-201ENST00000342245 CDCA7Q9BWT1 371 aaPredicted RBP19■□□□□ 0.63
SMPD1-201ENST00000342245 ZMPSTE24O75844 475 aa18.99■□□□□ 0.63
SMPD1-201ENST00000342245 CDH15P55291 814 aa18.99■□□□□ 0.63
SMPD1-201ENST00000342245 DGKDQ16760 1214 aa18.99■□□□□ 0.63
SMPD1-201ENST00000342245 FAM209AQ5JX71 171 aa18.99■□□□□ 0.63
SMPD1-201ENST00000342245 GPR107Q5VW38 600 aa18.99■□□□□ 0.63
SMPD1-201ENST00000342245 EPGNQ6UW88 154 aa18.99■□□□□ 0.63
SMPD1-201ENST00000342245 POLNQ7Z5Q5 900 aa18.99■□□□□ 0.63
SMPD1-201ENST00000342245 LINC00116Q8NCU8 138 aa18.99■□□□□ 0.63
SMPD1-201ENST00000342245 ACDQ96AP0 544 aa18.99■□□□□ 0.63
SMPD1-201ENST00000342245 LRRC39Q96DD0 335 aa18.99■□□□□ 0.63
SMPD1-201ENST00000342245 WNK4Q96J92 1243 aa18.99■□□□□ 0.63
SMPD1-201ENST00000342245 LENG8Q96PV6 779 aaPredicted RBP18.99■□□□□ 0.63
SMPD1-201ENST00000342245 PDZD7Q9H5P4 517 aa18.99■□□□□ 0.63
SMPD1-201ENST00000342245 TFCP2L1Q9NZI6 479 aa18.99■□□□□ 0.63
SMPD1-201ENST00000342245 AGTPBP1Q9UPW5 1226 aa18.99■□□□□ 0.63
SMPD1-201ENST00000342245 ACOT8O14734 319 aa18.99■□□□□ 0.63
SMPD1-201ENST00000342245 CLPXO76031 633 aa18.99■□□□□ 0.63
SMPD1-201ENST00000342245 KRT75O95678 551 aa18.99■□□□□ 0.63
SMPD1-201ENST00000342245 BCL10O95999 233 aa18.99■□□□□ 0.63
SMPD1-201ENST00000342245 CYP3A4P08684 503 aa18.99■□□□□ 0.63
SMPD1-201ENST00000342245 YBX3P16989 372 aaKnown RBP eCLIP18.99■□□□□ 0.63
SMPD1-201ENST00000342245 MYF6P23409 242 aa18.99■□□□□ 0.63
SMPD1-201ENST00000342245 HSPA1LP34931 641 aa18.99■□□□□ 0.63
SMPD1-201ENST00000342245 GDF10P55107 478 aa18.99■□□□□ 0.63
SMPD1-201ENST00000342245 ABCE1P61221 599 aaKnown RBP18.99■□□□□ 0.63
SMPD1-201ENST00000342245 TAP1Q03518 808 aa18.99■□□□□ 0.63
SMPD1-201ENST00000342245 NFATC3Q12968 1075 aa18.99■□□□□ 0.63
SMPD1-201ENST00000342245 PEX6Q13608 980 aa18.99■□□□□ 0.63
SMPD1-201ENST00000342245 PIGHQ14442 188 aaPredicted RBP18.99■□□□□ 0.63
SMPD1-201ENST00000342245 MAMDC4Q6UXC1 1216 aa18.99■□□□□ 0.63
SMPD1-201ENST00000342245 BBS12Q6ZW61 710 aa18.99■□□□□ 0.63
SMPD1-201ENST00000342245 IGFN1Q86VF2 1251 aa18.99■□□□□ 0.63
SMPD1-201ENST00000342245 CCDC24Q8N4L8 307 aa18.99■□□□□ 0.63
SMPD1-201ENST00000342245 FAM47BQ8NA70 645 aa18.99■□□□□ 0.63
SMPD1-201ENST00000342245 CALML6Q8TD86 181 aa18.99■□□□□ 0.63
SMPD1-201ENST00000342245 TFAP2CQ92754 450 aa18.99■□□□□ 0.63
SMPD1-201ENST00000342245 CFAP36Q96G28 342 aa18.99■□□□□ 0.63
SMPD1-201ENST00000342245 DUS3LQ96G46 650 aaKnown RBP18.99■□□□□ 0.63
SMPD1-201ENST00000342245 ALPK1Q96QP1 1244 aa18.99■□□□□ 0.63
SMPD1-201ENST00000342245 SLC4A5Q9BY07 1137 aa18.99■□□□□ 0.63
SMPD1-201ENST00000342245 PNPOQ9NVS9 261 aa18.99■□□□□ 0.63
SMPD1-201ENST00000342245 TMEM191CA6NGB0 347 aa18.98■□□□□ 0.63
SMPD1-201ENST00000342245 CENPBD1B2RD01 187 aa18.98■□□□□ 0.63
SMPD1-201ENST00000342245 J3QRK9 145 aa18.98■□□□□ 0.63
SMPD1-201ENST00000342245 DYNC1LI2O43237 492 aaPredicted RBP18.98■□□□□ 0.63
SMPD1-201ENST00000342245 ERBB2P04626 1255 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms