RNA–Protein interactions for RNA: ENST00000341757.9

SCIN-202, Transcript of scinderin, humanhuman

TSL 1 (best)

Gene SCIN, Length 2,569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCIN-202ENST00000341757 TSPAN9O75954 239 aa13.21□□□□□ -0.3
SCIN-202ENST00000341757 CSPG5O95196 566 aa13.21□□□□□ -0.3
SCIN-202ENST00000341757 GLULP15104 373 aa13.21□□□□□ -0.3
SCIN-202ENST00000341757 BCAMP50895 628 aa13.21□□□□□ -0.3
SCIN-202ENST00000341757 TRPC3Q13507 836 aa13.21□□□□□ -0.3
SCIN-202ENST00000341757 ESCO1Q5FWF5 840 aa13.21□□□□□ -0.3
SCIN-202ENST00000341757 FSCBQ5H9T9 825 aa13.21□□□□□ -0.3
SCIN-202ENST00000341757 TNIP2Q8NFZ5 429 aa13.21□□□□□ -0.3
SCIN-202ENST00000341757 SLC13A1Q9BZW2 595 aa13.21□□□□□ -0.3
SCIN-202ENST00000341757 IKZF4Q9H2S9 585 aa13.21□□□□□ -0.3
SCIN-202ENST00000341757 HMG20AQ9NP66 347 aa13.21□□□□□ -0.3
SCIN-202ENST00000341757 C12orf4Q9NQ89 552 aa13.21□□□□□ -0.3
SCIN-202ENST00000341757 ALS2Q96Q42 1657 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 FAM155AB1AL88 458 aaPredicted RBP13.2□□□□□ -0.3
SCIN-202ENST00000341757 TRIM49D1C9J1S8 452 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 H7C0C1 242 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 SLC22A1O15245 554 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 DCXO43602 365 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 IDH3BO43837 385 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 LYPLA1O75608 230 aaPredicted RBP13.2□□□□□ -0.3
SCIN-202ENST00000341757 GCNT3O95395 438 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 KRT3P12035 628 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 RFX1P22670 979 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 EEF1DP29692 281 aaKnown RBP13.2□□□□□ -0.3
SCIN-202ENST00000341757 RFC4P35249 363 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 NUDT2P50583 147 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 STX1BP61266 288 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 MRPS5P82675 430 aaKnown RBP13.2□□□□□ -0.3
SCIN-202ENST00000341757 CCDC14Q49A88 953 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 UGT3A1Q6NUS8 523 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 PLEKHG7Q6ZR37 379 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 SLC51BQ86UW2 128 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 ARHGEF19Q8IW93 802 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 HACE1Q8IYU2 909 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 RNF148Q8N7C7 305 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 ZBTB38Q8NAP3 1195 aaPredicted RBP13.2□□□□□ -0.3
SCIN-202ENST00000341757 ABHD11Q8NFV4 315 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 EPS8L1Q8TE68 723 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 ZC3H15Q8WU90 426 aaKnown RBP13.2□□□□□ -0.3
SCIN-202ENST00000341757 SLC44A1Q8WWI5 657 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 TXNDC15Q96J42 360 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 TMEM121Q9BTD3 319 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 RPAP3Q9H6T3 665 aaPredicted RBP13.2□□□□□ -0.3
SCIN-202ENST00000341757 C12orf10Q9HB07 376 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 WDR6Q9NNW5 1121 aaKnown RBP13.2□□□□□ -0.3
SCIN-202ENST00000341757 BCS1LQ9Y276 419 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 ARHGEF35A5YM69 484 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 AURKAO14965 403 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 ASNA1O43681 348 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 TOM1L1O75674 476 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 SEC24DO94855 1032 aaPredicted RBP13.2□□□□□ -0.3
SCIN-202ENST00000341757 IDH3AP50213 366 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 SLC12A3P55017 1021 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 PKNOX1P55347 436 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 ECT2LQ008S8 904 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 OCA2Q04671 838 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 HSPA14Q0VDF9 509 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 GRSF1Q12849 480 aaKnown RBP eCLIP13.2□□□□□ -0.3
SCIN-202ENST00000341757 NFE2Q16621 373 aaPredicted RBP13.2□□□□□ -0.3
SCIN-202ENST00000341757 SLX4IPQ5VYV7 408 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 BNC2Q6ZN30 1099 aaPredicted RBP13.2□□□□□ -0.3
SCIN-202ENST00000341757 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.2□□□□□ -0.3
SCIN-202ENST00000341757 TOR1AIP2Q8NFQ8 470 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 BRSK1Q8TDC3 778 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 VPS35Q96QK1 796 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 YME1L1Q96TA2 773 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 SERPINB13Q9UIV8 391 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 NOCTQ9UK39 431 aaKnown RBP13.2□□□□□ -0.3
SCIN-202ENST00000341757 PCDHA12Q9UN75 941 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 ZNF652Q9Y2D9 606 aa13.2□□□□□ -0.3
SCIN-202ENST00000341757 PCM1Q15154 2024 aa13.19□□□□□ -0.3
SCIN-202ENST00000341757 TESPA1A2RU30 521 aaPredicted RBP13.19□□□□□ -0.3
SCIN-202ENST00000341757 HAT1O14929 419 aa13.19□□□□□ -0.3
SCIN-202ENST00000341757 TGFB1I1O43294 461 aa13.19□□□□□ -0.3
SCIN-202ENST00000341757 SLITRK3O94933 977 aa13.19□□□□□ -0.3
SCIN-202ENST00000341757 IFNB1P01574 187 aa13.19□□□□□ -0.3
SCIN-202ENST00000341757 BPGMP07738 259 aa13.19□□□□□ -0.3
SCIN-202ENST00000341757 CDH1P12830 882 aa13.19□□□□□ -0.3
SCIN-202ENST00000341757 BDNFP23560 247 aa13.19□□□□□ -0.3
SCIN-202ENST00000341757 SERPINB1P30740 379 aa13.19□□□□□ -0.3
SCIN-202ENST00000341757 GJC1P36383 396 aa13.19□□□□□ -0.3
SCIN-202ENST00000341757 RAD23AP54725 363 aa13.19□□□□□ -0.3
SCIN-202ENST00000341757 KCNQ4P56696 695 aa13.19□□□□□ -0.3
SCIN-202ENST00000341757 NEDD8Q15843 81 aa13.19□□□□□ -0.3
SCIN-202ENST00000341757 BBS9Q3SYG4 887 aa13.19□□□□□ -0.3
SCIN-202ENST00000341757 PIGGQ5H8A4 983 aa13.19□□□□□ -0.3
SCIN-202ENST00000341757 CYP4A22Q5TCH4 519 aa13.19□□□□□ -0.3
SCIN-202ENST00000341757 KCTD8Q6ZWB6 473 aa13.19□□□□□ -0.3
SCIN-202ENST00000341757 IFNL2Q8IZJ0 200 aa13.19□□□□□ -0.3
SCIN-202ENST00000341757 ZSWIM2Q8NEG5 633 aa13.19□□□□□ -0.3
SCIN-202ENST00000341757 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.19□□□□□ -0.3
SCIN-202ENST00000341757 HAS1Q92839 578 aa13.19□□□□□ -0.3
SCIN-202ENST00000341757 REEP2Q9BRK0 252 aa13.19□□□□□ -0.3
SCIN-202ENST00000341757 WDR12Q9GZL7 423 aaKnown RBP13.19□□□□□ -0.3
SCIN-202ENST00000341757 TRPV6Q9H1D0 765 aa13.19□□□□□ -0.3
SCIN-202ENST00000341757 CYP2D6P10635 497 aa13.19□□□□□ -0.3
SCIN-202ENST00000341757 MYL4P12829 197 aa13.19□□□□□ -0.3
SCIN-202ENST00000341757 CD58P19256 250 aa13.19□□□□□ -0.3
SCIN-202ENST00000341757 MATN1P21941 496 aa13.19□□□□□ -0.3
SCIN-202ENST00000341757 TMBIM6P55061 237 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms