RNA–Protein interactions for RNA: ENST00000341259.6

SH2B3-201, Transcript of SH2B adaptor protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2B3, Length 5,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-201ENST00000341259 TNIP2Q8NFZ5 429 aa19.78■□□□□ 0.76
SH2B3-201ENST00000341259 RBBP8Q99708 897 aa19.78■□□□□ 0.76
SH2B3-201ENST00000341259 C2CD2Q9Y426 696 aa19.78■□□□□ 0.76
SH2B3-201ENST00000341259 RIPK3Q9Y572 518 aa19.78■□□□□ 0.76
SH2B3-201ENST00000341259 RTN3O95197 1032 aaPredicted RBP19.77■□□□□ 0.76
SH2B3-201ENST00000341259 MRPS6P82932 125 aaKnown RBP19.77■□□□□ 0.76
SH2B3-201ENST00000341259 SKIV2LQ15477 1246 aaKnown RBP19.77■□□□□ 0.76
SH2B3-201ENST00000341259 SLC45A4Q5BKX6 768 aa19.77■□□□□ 0.76
SH2B3-201ENST00000341259 EEF1DP3Q658K8 133 aa19.77■□□□□ 0.76
SH2B3-201ENST00000341259 GALNTL6Q49A17 601 aa19.77■□□□□ 0.76
SH2B3-201ENST00000341259 GJC2Q5T442 439 aaPredicted RBP19.77■□□□□ 0.76
SH2B3-201ENST00000341259 V9GYQ6 96 aa19.77■□□□□ 0.76
SH2B3-201ENST00000341259 NALCNQ8IZF0 1738 aa19.77■□□□□ 0.76
SH2B3-201ENST00000341259 TTLL13PA6NNM8 815 aa19.77■□□□□ 0.76
SH2B3-201ENST00000341259 SHBGP04278 402 aa19.77■□□□□ 0.76
SH2B3-201ENST00000341259 SERPINF2P08697 491 aa19.77■□□□□ 0.76
SH2B3-201ENST00000341259 NPR3P17342 541 aa19.77■□□□□ 0.76
SH2B3-201ENST00000341259 CLK2P49760 499 aaKnown RBP19.77■□□□□ 0.76
SH2B3-201ENST00000341259 PCBP1Q15365 356 aaKnown RBP eCLIP19.77■□□□□ 0.762e-12■■■■■ 38.2
SH2B3-201ENST00000341259 PRDM16Q9HAZ2 1276 aa19.77■□□□□ 0.76
SH2B3-201ENST00000341259 CHADO15335 359 aa19.77■□□□□ 0.76
SH2B3-201ENST00000341259 MYBL2P10244 700 aa19.77■□□□□ 0.76
SH2B3-201ENST00000341259 TFE3P19532 575 aaPredicted RBP19.77■□□□□ 0.76
SH2B3-201ENST00000341259 MTA1Q13330 715 aa19.77■□□□□ 0.76
SH2B3-201ENST00000341259 CXCL17Q6UXB2 119 aa19.77■□□□□ 0.76
SH2B3-201ENST00000341259 ITIH5Q86UX2 942 aa19.77■□□□□ 0.76
SH2B3-201ENST00000341259 ZNF384Q8TF68 577 aa19.77■□□□□ 0.76
SH2B3-201ENST00000341259 TEKT4Q8WW24 435 aa19.77■□□□□ 0.76
SH2B3-201ENST00000341259 SEMA4DQ92854 862 aa19.77■□□□□ 0.76
SH2B3-201ENST00000341259 MRPL42Q9Y6G3 142 aaKnown RBP19.77■□□□□ 0.76
SH2B3-201ENST00000341259 TRDMT1O14717 391 aaKnown RBP19.77■□□□□ 0.75
SH2B3-201ENST00000341259 CACHD1Q5VU97 1274 aa19.77■□□□□ 0.75
SH2B3-201ENST00000341259 PRKD2Q9BZL6 878 aa19.77■□□□□ 0.75
SH2B3-201ENST00000341259 SERPINE1P05121 402 aa19.76■□□□□ 0.75
SH2B3-201ENST00000341259 FAM84AQ96KN4 292 aa19.76■□□□□ 0.75
SH2B3-201ENST00000341259 EMILIN2Q9BXX0 1053 aa19.76■□□□□ 0.75
SH2B3-201ENST00000341259 BATF3Q9NR55 127 aa19.76■□□□□ 0.75
SH2B3-201ENST00000341259 FAM32AQ9Y421 112 aaKnown RBP19.76■□□□□ 0.75
SH2B3-201ENST00000341259 ZBTB22O15209 634 aa19.76■□□□□ 0.75
SH2B3-201ENST00000341259 TBC1D4O60343 1298 aa19.76■□□□□ 0.75
SH2B3-201ENST00000341259 TSPAN3O60637 253 aa19.76■□□□□ 0.75
SH2B3-201ENST00000341259 CDH2P19022 906 aaPredicted RBP19.76■□□□□ 0.75
SH2B3-201ENST00000341259 KCNA4P22459 653 aa19.76■□□□□ 0.75
SH2B3-201ENST00000341259 PTPN4P29074 926 aa19.76■□□□□ 0.75
SH2B3-201ENST00000341259 NME5P56597 212 aa19.76■□□□□ 0.75
SH2B3-201ENST00000341259 FUT11Q495W5 492 aa19.76■□□□□ 0.75
SH2B3-201ENST00000341259 SLC22A9Q8IVM8 553 aa19.76■□□□□ 0.75
SH2B3-201ENST00000341259 OR9Q1Q8NGQ5 310 aa19.76■□□□□ 0.75
SH2B3-201ENST00000341259 CNDP1Q96KN2 507 aa19.76■□□□□ 0.75
SH2B3-201ENST00000341259 ABCC13Q9NSE7 274 aa19.76■□□□□ 0.75
SH2B3-201ENST00000341259 ZSCAN9O15535 394 aaPredicted RBP19.76■□□□□ 0.75
SH2B3-201ENST00000341259 ZNF135P52742 658 aaPredicted RBP19.76■□□□□ 0.75
SH2B3-201ENST00000341259 MAP2K5Q13163 448 aa19.76■□□□□ 0.75
SH2B3-201ENST00000341259 PARP6Q2NL67 630 aa19.76■□□□□ 0.75
SH2B3-201ENST00000341259 LRRC23Q53EV4 343 aaPredicted RBP19.76■□□□□ 0.75
SH2B3-201ENST00000341259 ART4Q93070 314 aa19.76■□□□□ 0.75
SH2B3-201ENST00000341259 SPATA16Q9BXB7 569 aa19.76■□□□□ 0.75
SH2B3-201ENST00000341259 TRIM16O95361 564 aa19.76■□□□□ 0.75
SH2B3-201ENST00000341259 HIST2H2ACQ16777 129 aaPredicted RBP19.76■□□□□ 0.75
SH2B3-201ENST00000341259 HIST2H2AA3Q6FI13 130 aa19.76■□□□□ 0.75
SH2B3-201ENST00000341259 BNC2Q6ZN30 1099 aaPredicted RBP19.76■□□□□ 0.75
SH2B3-201ENST00000341259 VAT1Q99536 393 aa19.76■□□□□ 0.75
SH2B3-201ENST00000341259 SNRNP25Q9BV90 132 aaKnown RBP19.76■□□□□ 0.75
SH2B3-201ENST00000341259 MRPL9Q9BYD2 267 aaKnown RBP19.76■□□□□ 0.75
SH2B3-201ENST00000341259 SLC24A3Q9HC58 644 aa19.76■□□□□ 0.75
SH2B3-201ENST00000341259 UBTFL6P0CB48 400 aaPredicted RBP19.75■□□□□ 0.75
SH2B3-201ENST00000341259 NAB1Q13506 487 aa19.75■□□□□ 0.75
SH2B3-201ENST00000341259 ITGA9Q13797 1035 aa19.75■□□□□ 0.75
SH2B3-201ENST00000341259 SDE2Q6IQ49 451 aa19.75■□□□□ 0.75
SH2B3-201ENST00000341259 HSFY1Q96LI6 401 aa19.75■□□□□ 0.75
SH2B3-201ENST00000341259 KREMEN1Q96MU8 473 aa19.75■□□□□ 0.75
SH2B3-201ENST00000341259 ECSITQ9BQ95 431 aa19.75■□□□□ 0.75
SH2B3-201ENST00000341259 CLCA2Q9UQC9 943 aa19.75■□□□□ 0.75
SH2B3-201ENST00000341259 RPL7AP62424 266 aaKnown RBP19.75■□□□□ 0.75
SH2B3-201ENST00000341259 LRRC74AQ0VAA2 488 aa19.75■□□□□ 0.75
SH2B3-201ENST00000341259 DYNC1I2Q13409 638 aaKnown RBP19.75■□□□□ 0.75
SH2B3-201ENST00000341259 PGBD3Q8N328 593 aa19.75■□□□□ 0.75
SH2B3-201ENST00000341259 MREGQ8N565 214 aa19.75■□□□□ 0.75
SH2B3-201ENST00000341259 VPS37AQ8NEZ2 397 aa19.75■□□□□ 0.75
SH2B3-201ENST00000341259 ATP13A1Q9HD20 1204 aa19.75■□□□□ 0.75
SH2B3-201ENST00000341259 EVPLLA8MZ36 301 aa19.75■□□□□ 0.75
SH2B3-201ENST00000341259 PLOD1Q02809 727 aaPredicted RBP19.75■□□□□ 0.75
SH2B3-201ENST00000341259 LGI2Q8N0V4 545 aa19.75■□□□□ 0.75
SH2B3-201ENST00000341259 BSNDQ8WZ55 320 aa19.75■□□□□ 0.75
SH2B3-201ENST00000341259 OTUB1Q96FW1 271 aaPredicted RBP19.75■□□□□ 0.75
SH2B3-201ENST00000341259 RGPD8O14715 1765 aaPredicted RBP19.75■□□□□ 0.75
SH2B3-201ENST00000341259 B3GALNT2Q8NCR0 500 aa19.75■□□□□ 0.75
SH2B3-201ENST00000341259 PCDHB18PQ96TA0 734 aa19.75■□□□□ 0.75
SH2B3-201ENST00000341259 PRPF18Q99633 342 aaKnown RBP19.75■□□□□ 0.75
SH2B3-201ENST00000341259 GPR20Q99678 358 aa19.75■□□□□ 0.75
SH2B3-201ENST00000341259 TPBGLP0DKB5 382 aa19.74■□□□□ 0.75
SH2B3-201ENST00000341259 GRM5P41594 1212 aa19.74■□□□□ 0.75
SH2B3-201ENST00000341259 ZNF467Q7Z7K2 595 aaPredicted RBP19.74■□□□□ 0.75
SH2B3-201ENST00000341259 ZNF75CPQ92670 426 aaPredicted RBP19.74■□□□□ 0.75
SH2B3-201ENST00000341259 LRRC39Q96DD0 335 aa19.74■□□□□ 0.75
SH2B3-201ENST00000341259 PCDHB12Q9Y5F1 795 aa19.74■□□□□ 0.75
SH2B3-201ENST00000341259 IGLV3-22A0A075B6J6 115 aa19.74■□□□□ 0.75
SH2B3-201ENST00000341259 A0A096LPK6 155 aa19.74■□□□□ 0.75
SH2B3-201ENST00000341259 VAPBO95292 243 aa19.74■□□□□ 0.75
SH2B3-201ENST00000341259 MYL4P12829 197 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms