RNA–Protein interactions for RNA: ENST00000340650.5

NHLRC1-201, Transcript of NHL repeat containing E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 BASIC

Gene NHLRC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1-201ENST00000340650 TMCO4Q5TGY1 634 aa20.24■□□□□ 0.83
NHLRC1-201ENST00000340650 KYAT3Q6YP21 454 aaKnown RBP20.24■□□□□ 0.83
NHLRC1-201ENST00000340650 ARRDC4Q8NCT1 418 aa20.24■□□□□ 0.83
NHLRC1-201ENST00000340650 SMG8Q8ND04 991 aaKnown RBP20.24■□□□□ 0.83
NHLRC1-201ENST00000340650 FNIP1Q8TF40 1166 aa20.24■□□□□ 0.83
NHLRC1-201ENST00000340650 CCDC106Q9BWC9 280 aa20.24■□□□□ 0.83
NHLRC1-201ENST00000340650 MKS1Q9NXB0 559 aa20.24■□□□□ 0.83
NHLRC1-201ENST00000340650 NDE1Q9NXR1 346 aa20.24■□□□□ 0.83
NHLRC1-201ENST00000340650 SIRPGQ9P1W8 387 aa20.24■□□□□ 0.83
NHLRC1-201ENST00000340650 ZNF180Q9UJW8 692 aa20.24■□□□□ 0.83
NHLRC1-201ENST00000340650 TRIM49D1C9J1S8 452 aa20.23■□□□□ 0.83
NHLRC1-201ENST00000340650 P4HA1P13674 534 aa20.23■□□□□ 0.83
NHLRC1-201ENST00000340650 YWHAGP61981 247 aaKnown RBP eCLIP20.23■□□□□ 0.83
NHLRC1-201ENST00000340650 DYNC1I2Q13409 638 aaKnown RBP20.23■□□□□ 0.83
NHLRC1-201ENST00000340650 TEX44Q53QW1 395 aa20.23■□□□□ 0.83
NHLRC1-201ENST00000340650 RFX8Q6ZV50 586 aa20.23■□□□□ 0.83
NHLRC1-201ENST00000340650 SENP6Q9GZR1 1112 aaPredicted RBP20.23■□□□□ 0.83
NHLRC1-201ENST00000340650 ELOVL4Q9GZR5 314 aa20.23■□□□□ 0.83
NHLRC1-201ENST00000340650 C1orf21Q9H246 121 aa20.23■□□□□ 0.83
NHLRC1-201ENST00000340650 TRMT13Q9NUP7 481 aaKnown RBP20.23■□□□□ 0.83
NHLRC1-201ENST00000340650 TTLL3Q9Y4R7 772 aa20.23■□□□□ 0.83
NHLRC1-201ENST00000340650 THSD7BQ9C0I4 1608 aa20.23■□□□□ 0.83
NHLRC1-201ENST00000340650 SMIM28A0A1B0GU29 152 aa20.23■□□□□ 0.83
NHLRC1-201ENST00000340650 CST5P28325 142 aaPredicted RBP20.23■□□□□ 0.83
NHLRC1-201ENST00000340650 ZBTB6Q15916 424 aa20.23■□□□□ 0.83
NHLRC1-201ENST00000340650 SLC5A9Q2M3M2 681 aa20.23■□□□□ 0.83
NHLRC1-201ENST00000340650 KCNT1Q5JUK3 1230 aa20.23■□□□□ 0.83
NHLRC1-201ENST00000340650 DPH6Q7L8W6 267 aa20.23■□□□□ 0.83
NHLRC1-201ENST00000340650 ADGRG6Q86SQ4 1221 aa20.23■□□□□ 0.83
NHLRC1-201ENST00000340650 PCSK9Q8NBP7 692 aaKnown RBP20.23■□□□□ 0.83
NHLRC1-201ENST00000340650 BEST2Q8NFU1 509 aa20.23■□□□□ 0.83
NHLRC1-201ENST00000340650 RAB3IL1Q8TBN0 382 aa20.23■□□□□ 0.83
NHLRC1-201ENST00000340650 NCSTNQ92542 709 aa20.23■□□□□ 0.83
NHLRC1-201ENST00000340650 APBB2Q92870 758 aa20.23■□□□□ 0.83
NHLRC1-201ENST00000340650 E2F7Q96AV8 911 aa20.23■□□□□ 0.83
NHLRC1-201ENST00000340650 GORASP1Q9BQQ3 440 aa20.23■□□□□ 0.83
NHLRC1-201ENST00000340650 GOLGA2P5Q9HBQ8 144 aa20.23■□□□□ 0.83
NHLRC1-201ENST00000340650 SLC7A8Q9UHI5 535 aa20.23■□□□□ 0.83
NHLRC1-201ENST00000340650 DERAQ9Y315 318 aa20.23■□□□□ 0.83
NHLRC1-201ENST00000340650 MCF2LO15068 1137 aa20.22■□□□□ 0.83
NHLRC1-201ENST00000340650 CILPO75339 1184 aa20.22■□□□□ 0.83
NHLRC1-201ENST00000340650 RNF8O76064 485 aa20.22■□□□□ 0.83
NHLRC1-201ENST00000340650 SNRPAP09012 282 aaKnown RBP20.22■□□□□ 0.83
NHLRC1-201ENST00000340650 CD48P09326 243 aa20.22■□□□□ 0.83
NHLRC1-201ENST00000340650 RBP3P10745 1247 aa20.22■□□□□ 0.83
NHLRC1-201ENST00000340650 STIP1P31948 543 aaKnown RBP20.22■□□□□ 0.83
NHLRC1-201ENST00000340650 CES4AQ5XG92 561 aa20.22■□□□□ 0.83
NHLRC1-201ENST00000340650 RNF180Q86T96 592 aa20.22■□□□□ 0.83
NHLRC1-201ENST00000340650 PRPF39Q86UA1 669 aaKnown RBP20.22■□□□□ 0.83
NHLRC1-201ENST00000340650 RFX6Q8HWS3 928 aa20.22■□□□□ 0.83
NHLRC1-201ENST00000340650 SLC4A11Q8NBS3 891 aa20.22■□□□□ 0.83
NHLRC1-201ENST00000340650 JOSD2Q8TAC2 188 aa20.22■□□□□ 0.83
NHLRC1-201ENST00000340650 SNX9Q9Y5X1 595 aa20.22■□□□□ 0.83
NHLRC1-201ENST00000340650 MEIS3P2A8K0S8 358 aa20.22■□□□□ 0.83
NHLRC1-201ENST00000340650 FKBP6O75344 327 aa20.22■□□□□ 0.83
NHLRC1-201ENST00000340650 KRT37O76014 449 aa20.22■□□□□ 0.83
NHLRC1-201ENST00000340650 INHAP05111 366 aa20.22■□□□□ 0.83
NHLRC1-201ENST00000340650 KRT3P12035 628 aa20.22■□□□□ 0.83
NHLRC1-201ENST00000340650 TMPRSS15P98073 1019 aa20.22■□□□□ 0.83
NHLRC1-201ENST00000340650 ITGA7Q13683 1181 aa20.22■□□□□ 0.83
NHLRC1-201ENST00000340650 HNRNPDQ14103 355 aaKnown RBP20.22■□□□□ 0.83
NHLRC1-201ENST00000340650 PDCD2Q16342 344 aaPredicted RBP20.22■□□□□ 0.83
NHLRC1-201ENST00000340650 ARID3BQ8IVW6 561 aaPredicted RBP20.22■□□□□ 0.83
NHLRC1-201ENST00000340650 CMASQ8NFW8 434 aaPredicted RBP20.22■□□□□ 0.83
NHLRC1-201ENST00000340650 ZNF296Q8WUU4 475 aaPredicted RBP20.22■□□□□ 0.83
NHLRC1-201ENST00000340650 PPP2R3CQ969Q6 453 aa20.22■□□□□ 0.83
NHLRC1-201ENST00000340650 THTPAQ9BU02 230 aa20.22■□□□□ 0.83
NHLRC1-201ENST00000340650 MECRQ9BV79 373 aa20.22■□□□□ 0.83
NHLRC1-201ENST00000340650 DMAP1Q9NPF5 467 aaPredicted RBP20.22■□□□□ 0.83
NHLRC1-201ENST00000340650 IL1RAPL1Q9NZN1 696 aa20.22■□□□□ 0.83
NHLRC1-201ENST00000340650 CHADO15335 359 aa20.21■□□□□ 0.83
NHLRC1-201ENST00000340650 ACLYP53396 1101 aa20.21■□□□□ 0.83
NHLRC1-201ENST00000340650 MRPS5P82675 430 aaKnown RBP20.21■□□□□ 0.83
NHLRC1-201ENST00000340650 CDC16Q13042 620 aa20.21■□□□□ 0.83
NHLRC1-201ENST00000340650 CUL3Q13618 768 aa20.21■□□□□ 0.83
NHLRC1-201ENST00000340650 DENND1BQ6P3S1 775 aa20.21■□□□□ 0.83
NHLRC1-201ENST00000340650 RNF217Q8TC41 542 aa20.21■□□□□ 0.83
NHLRC1-201ENST00000340650 CLPTM1LQ96KA5 538 aa20.21■□□□□ 0.83
NHLRC1-201ENST00000340650 ZFP42Q96MM3 310 aa20.21■□□□□ 0.83
NHLRC1-201ENST00000340650 TUBGCP5Q96RT8 1024 aa20.21■□□□□ 0.83
NHLRC1-201ENST00000340650 AGO3Q9H9G7 860 aaKnown RBP20.21■□□□□ 0.83
NHLRC1-201ENST00000340650 CYP3A43Q9HB55 503 aa20.21■□□□□ 0.83
NHLRC1-201ENST00000340650 PCMTD2Q9NV79 361 aa20.21■□□□□ 0.83
NHLRC1-201ENST00000340650 NOD1Q9Y239 953 aa20.21■□□□□ 0.83
NHLRC1-201ENST00000340650 BUD23O43709 281 aaKnown RBP20.21■□□□□ 0.83
NHLRC1-201ENST00000340650 SNNO75324 88 aaPredicted RBP20.21■□□□□ 0.83
NHLRC1-201ENST00000340650 NDST1P52848 882 aa20.21■□□□□ 0.83
NHLRC1-201ENST00000340650 PTPN11Q06124 597 aaPredicted RBP20.21■□□□□ 0.83
NHLRC1-201ENST00000340650 KDSRQ06136 332 aa20.21■□□□□ 0.83
NHLRC1-201ENST00000340650 MGAT3Q09327 533 aa20.21■□□□□ 0.83
NHLRC1-201ENST00000340650 PTPN20Q4JDL3 420 aa20.21■□□□□ 0.83
NHLRC1-201ENST00000340650 C9orf57Q5W0N0 161 aa20.21■□□□□ 0.83
NHLRC1-201ENST00000340650 SMYD5Q6GMV2 418 aa20.21■□□□□ 0.83
NHLRC1-201ENST00000340650 AAGABQ6PD74 315 aa20.21■□□□□ 0.83
NHLRC1-201ENST00000340650 TMEM176AQ96HP8 235 aa20.21■□□□□ 0.83
NHLRC1-201ENST00000340650 DDX50Q9BQ39 737 aaKnown RBP20.21■□□□□ 0.83
NHLRC1-201ENST00000340650 ZDHHC7Q9NXF8 308 aa20.21■□□□□ 0.83
NHLRC1-201ENST00000340650 UBQLN1Q9UMX0 589 aaKnown RBP20.21■□□□□ 0.83
NHLRC1-201ENST00000340650 TBC1D30Q9Y2I9 924 aa20.21■□□□□ 0.83
NHLRC1-201ENST00000340650 SLC4A7Q9Y6M7 1214 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms