RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 CLEC4EQ9ULY5 219 aa15.82■□□□□ 0.12
UBE3B-201ENST00000340074 TBC1D3BA6NDS4 549 aa15.81■□□□□ 0.12
UBE3B-201ENST00000340074 C2CD4BA6NLJ0 364 aa15.81■□□□□ 0.12
UBE3B-201ENST00000340074 SIGLEC16A6NMB1 481 aa15.81■□□□□ 0.12
UBE3B-201ENST00000340074 RTN2O75298 545 aa15.81■□□□□ 0.12
UBE3B-201ENST00000340074 FTLP02792 175 aaPredicted RBP15.81■□□□□ 0.12
UBE3B-201ENST00000340074 TPM1P09493 284 aa15.81■□□□□ 0.12
UBE3B-201ENST00000340074 CISD3P0C7P0 127 aa15.81■□□□□ 0.12
UBE3B-201ENST00000340074 PDGFRAP16234 1089 aa15.81■□□□□ 0.12
UBE3B-201ENST00000340074 ABCB4P21439 1286 aa15.81■□□□□ 0.12
UBE3B-201ENST00000340074 RRM1P23921 792 aa15.81■□□□□ 0.12
UBE3B-201ENST00000340074 HOXD9P28356 352 aaPredicted RBP15.81■□□□□ 0.12
UBE3B-201ENST00000340074 HNRNPH3P31942 346 aaKnown RBP15.81■□□□□ 0.12
UBE3B-201ENST00000340074 RFC1P35251 1148 aaPredicted RBP15.81■□□□□ 0.12
UBE3B-201ENST00000340074 DGKGP49619 791 aa15.81■□□□□ 0.12
UBE3B-201ENST00000340074 CXCR3P49682 368 aa15.81■□□□□ 0.12
UBE3B-201ENST00000340074 ATP11AP98196 1134 aa15.81■□□□□ 0.12
UBE3B-201ENST00000340074 RAP1GAP2Q684P5 730 aa15.81■□□□□ 0.12
UBE3B-201ENST00000340074 DNAJC24Q6P3W2 148 aa15.81■□□□□ 0.12
UBE3B-201ENST00000340074 MAMSTRQ6ZN01 415 aa15.81■□□□□ 0.12
UBE3B-201ENST00000340074 SND1Q7KZF4 910 aaKnown RBP eCLIP15.81■□□□□ 0.12
UBE3B-201ENST00000340074 TMC6Q7Z403 805 aa15.81■□□□□ 0.12
UBE3B-201ENST00000340074 BNIPLQ7Z465 357 aa15.81■□□□□ 0.12
UBE3B-201ENST00000340074 MAML2Q8IZL2 1156 aaPredicted RBP15.81■□□□□ 0.12
UBE3B-201ENST00000340074 SPEM1Q8N4L4 309 aa15.81■□□□□ 0.12
UBE3B-201ENST00000340074 TERB1Q8NA31 727 aa15.81■□□□□ 0.12
UBE3B-201ENST00000340074 OR8K1Q8NGG5 319 aa15.81■□□□□ 0.12
UBE3B-201ENST00000340074 RPLP0P6Q8NHW5 317 aa15.81■□□□□ 0.12
UBE3B-201ENST00000340074 MYEOVQ96EZ4 313 aa15.81■□□□□ 0.12
UBE3B-201ENST00000340074 PRICKLE1Q96MT3 831 aaPredicted RBP15.81■□□□□ 0.12
UBE3B-201ENST00000340074 DNAJC7Q99615 494 aa15.81■□□□□ 0.12
UBE3B-201ENST00000340074 WDCPQ9H6R7 721 aa15.81■□□□□ 0.12
UBE3B-201ENST00000340074 C2orf42Q9NWW7 574 aa15.81■□□□□ 0.12
UBE3B-201ENST00000340074 EML5Q05BV3 1969 aa15.81■□□□□ 0.12
UBE3B-201ENST00000340074 ATMINO43313 823 aaPredicted RBP15.8■□□□□ 0.12
UBE3B-201ENST00000340074 TBL1XO60907 577 aa15.8■□□□□ 0.12
UBE3B-201ENST00000340074 ADCY5O95622 1261 aa15.8■□□□□ 0.12
UBE3B-201ENST00000340074 F9P00740 461 aa15.8■□□□□ 0.12
UBE3B-201ENST00000340074 SDC4P31431 198 aa15.8■□□□□ 0.12
UBE3B-201ENST00000340074 TNFRSF4P43489 277 aa15.8■□□□□ 0.12
UBE3B-201ENST00000340074 ADKP55263 362 aaKnown RBP15.8■□□□□ 0.12
UBE3B-201ENST00000340074 RPL7AP62424 266 aaKnown RBP15.8■□□□□ 0.12
UBE3B-201ENST00000340074 SATB1Q01826 763 aa15.8■□□□□ 0.12
UBE3B-201ENST00000340074 CDO1Q16878 200 aa15.8■□□□□ 0.12
UBE3B-201ENST00000340074 C15orf59Q2T9L4 293 aaPredicted RBP15.8■□□□□ 0.12
UBE3B-201ENST00000340074 CCDC14Q49A88 953 aa15.8■□□□□ 0.12
UBE3B-201ENST00000340074 C2orf27AQ580R0 203 aa15.8■□□□□ 0.12
UBE3B-201ENST00000340074 MS4A13Q5J8X5 152 aa15.8■□□□□ 0.12
UBE3B-201ENST00000340074 SH3PXD2AQ5TCZ1 1133 aa15.8■□□□□ 0.12
UBE3B-201ENST00000340074 EMC10Q5UCC4 262 aa15.8■□□□□ 0.12
UBE3B-201ENST00000340074 WDR59Q6PJI9 974 aa15.8■□□□□ 0.12
UBE3B-201ENST00000340074 VPS36Q86VN1 386 aa15.8■□□□□ 0.12
UBE3B-201ENST00000340074 CHSY1Q86X52 802 aa15.8■□□□□ 0.12
UBE3B-201ENST00000340074 PRMT1Q99873 361 aaKnown RBP15.8■□□□□ 0.12
UBE3B-201ENST00000340074 TKTL2Q9H0I9 626 aa15.8■□□□□ 0.12
UBE3B-201ENST00000340074 ANLNQ9NQW6 1124 aa15.8■□□□□ 0.12
UBE3B-201ENST00000340074 USP34Q70CQ2 3546 aa15.8■□□□□ 0.12
UBE3B-201ENST00000340074 A0A087X0T9 212 aa15.79■□□□□ 0.12
UBE3B-201ENST00000340074 PRRT4C9JH25 899 aa15.79■□□□□ 0.12
UBE3B-201ENST00000340074 MFAP3LO75121 409 aa15.79■□□□□ 0.12
UBE3B-201ENST00000340074 ATG13O75143 517 aa15.79■□□□□ 0.12
UBE3B-201ENST00000340074 PAGE1O75459 146 aa15.79■□□□□ 0.12
UBE3B-201ENST00000340074 FAM228BP0C875 321 aa15.79■□□□□ 0.12
UBE3B-201ENST00000340074 TACR2P21452 398 aa15.79■□□□□ 0.12
UBE3B-201ENST00000340074 GPD1P21695 349 aa15.79■□□□□ 0.12
UBE3B-201ENST00000340074 RDXP35241 583 aaKnown RBP15.79■□□□□ 0.12
UBE3B-201ENST00000340074 TIE1P35590 1138 aa15.79■□□□□ 0.12
UBE3B-201ENST00000340074 CXCL12P48061 93 aa15.79■□□□□ 0.12
UBE3B-201ENST00000340074 CCR3P51677 355 aa15.79■□□□□ 0.12
UBE3B-201ENST00000340074 PTPN5P54829 565 aa15.79■□□□□ 0.12
UBE3B-201ENST00000340074 RPS24P62847 133 aaKnown RBP15.79■□□□□ 0.12
UBE3B-201ENST00000340074 TBX2Q13207 712 aaPredicted RBP15.79■□□□□ 0.12
UBE3B-201ENST00000340074 ARID5BQ14865 1188 aa15.79■□□□□ 0.12
UBE3B-201ENST00000340074 RAB6CQ53S08 254 aa15.79■□□□□ 0.12
UBE3B-201ENST00000340074 BRMS1LQ5PSV4 323 aa15.79■□□□□ 0.12
UBE3B-201ENST00000340074 PPP1R15BQ5SWA1 713 aa15.79■□□□□ 0.12
UBE3B-201ENST00000340074 C10orf76Q5T2E6 689 aa15.79■□□□□ 0.12
UBE3B-201ENST00000340074 TSSK4Q6SA08 328 aa15.79■□□□□ 0.12
UBE3B-201ENST00000340074 NUDT18Q6ZVK8 323 aa15.79■□□□□ 0.12
UBE3B-201ENST00000340074 DRC7Q8IY82 874 aa15.79■□□□□ 0.12
UBE3B-201ENST00000340074 LGI2Q8N0V4 545 aa15.79■□□□□ 0.12
UBE3B-201ENST00000340074 CFAP52Q8N1V2 620 aa15.79■□□□□ 0.12
UBE3B-201ENST00000340074 HJURPQ8NCD3 748 aaPredicted RBP15.79■□□□□ 0.12
UBE3B-201ENST00000340074 USP33Q8TEY7 942 aa15.79■□□□□ 0.12
UBE3B-201ENST00000340074 MCEEQ96PE7 176 aa15.79■□□□□ 0.12
UBE3B-201ENST00000340074 ANP32EQ9BTT0 268 aa15.79■□□□□ 0.12
UBE3B-201ENST00000340074 SLC2A11Q9BYW1 496 aa15.79■□□□□ 0.12
UBE3B-201ENST00000340074 IRX2Q9BZI1 471 aaPredicted RBP15.79■□□□□ 0.12
UBE3B-201ENST00000340074 RAB6CQ9H0N0 254 aa15.79■□□□□ 0.12
UBE3B-201ENST00000340074 ISCUQ9H1K1 167 aa15.79■□□□□ 0.12
UBE3B-201ENST00000340074 ZDHHC4Q9NPG8 344 aa15.79■□□□□ 0.12
UBE3B-201ENST00000340074 PRMT8Q9NR22 394 aaPredicted RBP15.79■□□□□ 0.12
UBE3B-201ENST00000340074 ABHD10Q9NUJ1 306 aa15.79■□□□□ 0.12
UBE3B-201ENST00000340074 PARVAQ9NVD7 372 aa15.79■□□□□ 0.12
UBE3B-201ENST00000340074 ARHGEF38Q9NXL2 777 aa15.79■□□□□ 0.12
UBE3B-201ENST00000340074 STIM2Q9P246 746 aa15.79■□□□□ 0.12
UBE3B-201ENST00000340074 SLC27A6Q9Y2P4 619 aa15.79■□□□□ 0.12
UBE3B-201ENST00000340074 CACNA1HO95180 2353 aa15.79■□□□□ 0.12
UBE3B-201ENST00000340074 DMDP11532 3685 aa15.79■□□□□ 0.12
UBE3B-201ENST00000340074 TYW5A2RUC4 315 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms