RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 TFDP1Q14186 410 aa12.97□□□□□ -0.33
DFFB-202ENST00000339350 BBS9Q3SYG4 887 aa12.97□□□□□ -0.33
DFFB-202ENST00000339350 KCNT1Q5JUK3 1230 aa12.97□□□□□ -0.33
DFFB-202ENST00000339350 GPD1LQ8N335 351 aa12.97□□□□□ -0.33
DFFB-202ENST00000339350 LILRB2Q8N423 598 aa12.97□□□□□ -0.33
DFFB-202ENST00000339350 ZCCHC9Q8N567 271 aaKnown RBP12.97□□□□□ -0.33
DFFB-202ENST00000339350 DDI1Q8WTU0 396 aa12.97□□□□□ -0.33
DFFB-202ENST00000339350 CAPSLQ8WWF8 208 aa12.97□□□□□ -0.33
DFFB-202ENST00000339350 TAMM41Q96BW9 452 aa12.97□□□□□ -0.33
DFFB-202ENST00000339350 WNK4Q96J92 1243 aa12.97□□□□□ -0.33
DFFB-202ENST00000339350 ACAP3Q96P50 834 aa12.97□□□□□ -0.33
DFFB-202ENST00000339350 MCEEQ96PE7 176 aa12.97□□□□□ -0.33
DFFB-202ENST00000339350 APOBEC3GQ9HC16 384 aaKnown RBP12.97□□□□□ -0.33
DFFB-202ENST00000339350 SEPT10Q9P0V9 454 aa12.97□□□□□ -0.33
DFFB-202ENST00000339350 LIASO43766 372 aa12.96□□□□□ -0.33
DFFB-202ENST00000339350 FKBP6O75344 327 aa12.96□□□□□ -0.33
DFFB-202ENST00000339350 CENPCQ03188 943 aa12.96□□□□□ -0.33
DFFB-202ENST00000339350 APOFQ13790 326 aa12.96□□□□□ -0.33
DFFB-202ENST00000339350 ZNF829Q3KNS6 432 aaPredicted RBP12.96□□□□□ -0.33
DFFB-202ENST00000339350 WDR44Q5JSH3 913 aa12.96□□□□□ -0.33
DFFB-202ENST00000339350 CCBE1Q6UXH8 406 aaPredicted RBP12.96□□□□□ -0.33
DFFB-202ENST00000339350 PAF1Q8N7H5 531 aa12.96□□□□□ -0.33
DFFB-202ENST00000339350 PCYOX1LQ8NBM8 494 aa12.96□□□□□ -0.33
DFFB-202ENST00000339350 DENND1AQ8TEH3 1009 aa12.96□□□□□ -0.33
DFFB-202ENST00000339350 GLMNQ92990 594 aa12.96□□□□□ -0.33
DFFB-202ENST00000339350 ATP2A3Q93084 1043 aa12.96□□□□□ -0.33
DFFB-202ENST00000339350 MED30Q96HR3 178 aa12.96□□□□□ -0.33
DFFB-202ENST00000339350 IER2Q9BTL4 223 aa12.96□□□□□ -0.33
DFFB-202ENST00000339350 GPAMQ9HCL2 828 aa12.96□□□□□ -0.33
DFFB-202ENST00000339350 SLC17A7Q9P2U7 560 aa12.96□□□□□ -0.33
DFFB-202ENST00000339350 DNALI1O14645 258 aaPredicted RBP12.96□□□□□ -0.34
DFFB-202ENST00000339350 XPO1O14980 1071 aaKnown RBP12.96□□□□□ -0.34
DFFB-202ENST00000339350 DNAJA2O60884 412 aa12.96□□□□□ -0.34
DFFB-202ENST00000339350 ENTPD3O75355 529 aa12.96□□□□□ -0.34
DFFB-202ENST00000339350 TM7SF2O76062 418 aa12.96□□□□□ -0.34
DFFB-202ENST00000339350 SRGAP2CP0DJJ0 459 aa12.96□□□□□ -0.34
DFFB-202ENST00000339350 SRGAP2BP0DMP2 458 aa12.96□□□□□ -0.34
DFFB-202ENST00000339350 IFNA8P32881 189 aa12.96□□□□□ -0.34
DFFB-202ENST00000339350 SLC1A1P43005 524 aa12.96□□□□□ -0.34
DFFB-202ENST00000339350 GDF10P55107 478 aa12.96□□□□□ -0.34
DFFB-202ENST00000339350 PSMC5P62195 406 aa12.96□□□□□ -0.34
DFFB-202ENST00000339350 SNAPC2Q13487 334 aa12.96□□□□□ -0.34
DFFB-202ENST00000339350 MSS51Q4VC12 460 aa12.96□□□□□ -0.34
DFFB-202ENST00000339350 CYP4A22Q5TCH4 519 aa12.96□□□□□ -0.34
DFFB-202ENST00000339350 ANKRD22Q5VYY1 191 aa12.96□□□□□ -0.34
DFFB-202ENST00000339350 TTC23LQ6PF05 361 aa12.96□□□□□ -0.34
DFFB-202ENST00000339350 SYDE1Q6ZW31 735 aaPredicted RBP12.96□□□□□ -0.34
DFFB-202ENST00000339350 MMAAQ8IVH4 418 aaKnown RBP12.96□□□□□ -0.34
DFFB-202ENST00000339350 ELMOD1Q8N336 334 aa12.96□□□□□ -0.34
DFFB-202ENST00000339350 SYTL5Q8TDW5 730 aaPredicted RBP12.96□□□□□ -0.34
DFFB-202ENST00000339350 CLEC4DQ8WXI8 215 aa12.96□□□□□ -0.34
DFFB-202ENST00000339350 MFSD14AQ96MC6 490 aa12.96□□□□□ -0.34
DFFB-202ENST00000339350 ZBED2Q9BTP6 218 aa12.96□□□□□ -0.34
DFFB-202ENST00000339350 DNAI2Q9GZS0 605 aa12.96□□□□□ -0.34
DFFB-202ENST00000339350 MARCH7Q9H992 704 aa12.96□□□□□ -0.34
DFFB-202ENST00000339350 PLK2Q9NYY3 685 aa12.96□□□□□ -0.34
DFFB-202ENST00000339350 SCINQ9Y6U3 715 aa12.96□□□□□ -0.34
DFFB-202ENST00000339350 SIN3BO75182 1162 aa12.95□□□□□ -0.34
DFFB-202ENST00000339350 TCEA3O75764 348 aa12.95□□□□□ -0.34
DFFB-202ENST00000339350 NOMO3P69849 1222 aa12.95□□□□□ -0.34
DFFB-202ENST00000339350 ZNF200P98182 395 aaPredicted RBP12.95□□□□□ -0.34
DFFB-202ENST00000339350 KDSRQ06136 332 aa12.95□□□□□ -0.34
DFFB-202ENST00000339350 PDK1Q15118 436 aa12.95□□□□□ -0.34
DFFB-202ENST00000339350 LIN9Q5TKA1 542 aa12.95□□□□□ -0.34
DFFB-202ENST00000339350 TAS1R3Q7RTX0 852 aa12.95□□□□□ -0.34
DFFB-202ENST00000339350 ZNF75CPQ92670 426 aaPredicted RBP12.95□□□□□ -0.34
DFFB-202ENST00000339350 OTUD5Q96G74 571 aa12.95□□□□□ -0.34
DFFB-202ENST00000339350 SPOCK3Q9BQ16 436 aa12.95□□□□□ -0.34
DFFB-202ENST00000339350 CDH19Q9H159 772 aa12.95□□□□□ -0.34
DFFB-202ENST00000339350 C12orf4Q9NQ89 552 aa12.95□□□□□ -0.34
DFFB-202ENST00000339350 SEPT9Q9UHD8 586 aaPredicted RBP12.95□□□□□ -0.34
DFFB-202ENST00000339350 UGT1A9O60656 530 aa12.95□□□□□ -0.34
DFFB-202ENST00000339350 MAPTP10636 758 aaKnown RBP12.95□□□□□ -0.34
DFFB-202ENST00000339350 UGT1A6P19224 532 aa12.95□□□□□ -0.34
DFFB-202ENST00000339350 UGT1A1P22309 533 aa12.95□□□□□ -0.34
DFFB-202ENST00000339350 UGT1A4P22310 534 aa12.95□□□□□ -0.34
DFFB-202ENST00000339350 UGT1A3P35503 534 aa12.95□□□□□ -0.34
DFFB-202ENST00000339350 UGT1A5P35504 534 aa12.95□□□□□ -0.34
DFFB-202ENST00000339350 IFITM2Q01629 132 aa12.95□□□□□ -0.34
DFFB-202ENST00000339350 OGDHQ02218 1023 aa12.95□□□□□ -0.34
DFFB-202ENST00000339350 KCNC4Q03721 635 aa12.95□□□□□ -0.34
DFFB-202ENST00000339350 OASLQ15646 514 aaKnown RBP12.95□□□□□ -0.34
DFFB-202ENST00000339350 MTERF2Q49AM1 385 aa12.95□□□□□ -0.34
DFFB-202ENST00000339350 SWSAP1Q6NVH7 229 aa12.95□□□□□ -0.34
DFFB-202ENST00000339350 TMPRSS6Q8IU80 811 aa12.95□□□□□ -0.34
DFFB-202ENST00000339350 NIM1KQ8IY84 436 aa12.95□□□□□ -0.34
DFFB-202ENST00000339350 TRIML2Q8N7C3 387 aa12.95□□□□□ -0.34
DFFB-202ENST00000339350 HCAR2Q8TDS4 363 aa12.95□□□□□ -0.34
DFFB-202ENST00000339350 TMEM143Q96AN5 459 aa12.95□□□□□ -0.34
DFFB-202ENST00000339350 RMDN3Q96TC7 470 aa12.95□□□□□ -0.34
DFFB-202ENST00000339350 UQCC2Q9BRT2 126 aa12.95□□□□□ -0.34
DFFB-202ENST00000339350 ZNF696Q9H7X3 374 aa12.95□□□□□ -0.34
DFFB-202ENST00000339350 UGT1A7Q9HAW7 530 aa12.95□□□□□ -0.34
DFFB-202ENST00000339350 UGT1A10Q9HAW8 530 aa12.95□□□□□ -0.34
DFFB-202ENST00000339350 UGT1A8Q9HAW9 530 aa12.95□□□□□ -0.34
DFFB-202ENST00000339350 EBF1Q9UH73 591 aa12.95□□□□□ -0.34
DFFB-202ENST00000339350 RABGEF1Q9UJ41 708 aa12.95□□□□□ -0.34
DFFB-202ENST00000339350 INPP5FQ9Y2H2 1132 aa12.95□□□□□ -0.34
DFFB-202ENST00000339350 DTNAQ9Y4J8 743 aa12.95□□□□□ -0.34
DFFB-202ENST00000339350 ZNF541Q9H0D2 1346 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms