RNA–Protein interactions for RNA: ENST00000338469.3

TREM2-201, Transcript of triggering receptor expressed on myeloid cells 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM2, Length 860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2-201ENST00000338469 PTGER3P43115 390 aa12.1□□□□□ -0.47
TREM2-201ENST00000338469 SLC8A3P57103 927 aa12.1□□□□□ -0.47
TREM2-201ENST00000338469 IRX4P78413 519 aa12.1□□□□□ -0.47
TREM2-201ENST00000338469 CDK17Q00537 523 aa12.1□□□□□ -0.47
TREM2-201ENST00000338469 FMO1Q01740 532 aa12.1□□□□□ -0.47
TREM2-201ENST00000338469 BST2Q10589 180 aaKnown RBP12.1□□□□□ -0.47
TREM2-201ENST00000338469 ST3GAL2Q16842 350 aa12.1□□□□□ -0.47
TREM2-201ENST00000338469 USP39Q53GS9 565 aaKnown RBP12.1□□□□□ -0.47
TREM2-201ENST00000338469 C10orf120Q5SQS8 335 aa12.1□□□□□ -0.47
TREM2-201ENST00000338469 C10orf76Q5T2E6 689 aa12.1□□□□□ -0.47
TREM2-201ENST00000338469 N4BP2L1Q5TBK1 243 aaPredicted RBP12.1□□□□□ -0.47
TREM2-201ENST00000338469 DENND1BQ6P3S1 775 aa12.1□□□□□ -0.47
TREM2-201ENST00000338469 KLHDC10Q6PID8 442 aa12.1□□□□□ -0.47
TREM2-201ENST00000338469 TRIM72Q6ZMU5 477 aa12.1□□□□□ -0.47
TREM2-201ENST00000338469 ZNF571Q7Z3V5 609 aaPredicted RBP12.1□□□□□ -0.47
TREM2-201ENST00000338469 PASD1Q8IV76 773 aa12.1□□□□□ -0.47
TREM2-201ENST00000338469 TMEFF1Q8IYR6 380 aa12.1□□□□□ -0.47
TREM2-201ENST00000338469 DEFB119Q8N690 84 aa12.1□□□□□ -0.47
TREM2-201ENST00000338469 C12orf50Q8NA57 414 aaPredicted RBP12.1□□□□□ -0.47
TREM2-201ENST00000338469 ANKRD52Q8NB46 1076 aa12.1□□□□□ -0.47
TREM2-201ENST00000338469 UBA3Q8TBC4 463 aa12.1□□□□□ -0.47
TREM2-201ENST00000338469 HMGB4Q8WW32 186 aa12.1□□□□□ -0.47
TREM2-201ENST00000338469 PPP1R9BQ96SB3 815 aa12.1□□□□□ -0.47
TREM2-201ENST00000338469 CHP1Q99653 195 aa12.1□□□□□ -0.47
TREM2-201ENST00000338469 BAG1Q99933 345 aaPredicted RBP12.1□□□□□ -0.47
TREM2-201ENST00000338469 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.1□□□□□ -0.47
TREM2-201ENST00000338469 BBS2Q9BXC9 721 aa12.1□□□□□ -0.47
TREM2-201ENST00000338469 NACA2Q9H009 215 aa12.1□□□□□ -0.47
TREM2-201ENST00000338469 DEF6Q9H4E7 631 aa12.1□□□□□ -0.47
TREM2-201ENST00000338469 PNPLA8Q9NP80 782 aa12.1□□□□□ -0.47
TREM2-201ENST00000338469 VPS45Q9NRW7 570 aa12.1□□□□□ -0.47
TREM2-201ENST00000338469 DNAJC17Q9NVM6 304 aaKnown RBP12.1□□□□□ -0.47
TREM2-201ENST00000338469 ARHGAP20Q9P2F6 1191 aa12.1□□□□□ -0.47
TREM2-201ENST00000338469 DEC1Q9P2X7 70 aa12.1□□□□□ -0.47
TREM2-201ENST00000338469 NAGPAQ9UK23 515 aa12.1□□□□□ -0.47
TREM2-201ENST00000338469 FBXO10Q9UK96 956 aa12.1□□□□□ -0.47
TREM2-201ENST00000338469 RALYQ9UKM9 306 aaKnown RBP12.1□□□□□ -0.47
TREM2-201ENST00000338469 STARD13Q9Y3M8 1113 aa12.1□□□□□ -0.47
TREM2-201ENST00000338469 CEP83Q9Y592 693 aa12.1□□□□□ -0.47
TREM2-201ENST00000338469 RAD54BQ9Y620 910 aa12.1□□□□□ -0.47
TREM2-201ENST00000338469 USP24Q9UPU5 2620 aa12.09□□□□□ -0.47
TREM2-201ENST00000338469 CFAP47Q6ZTR5 3102 aa12.09□□□□□ -0.47
TREM2-201ENST00000338469 CHD6Q8TD26 2715 aa12.09□□□□□ -0.47
TREM2-201ENST00000338469 SSU72P8A0A1W2PR75 194 aa12.09□□□□□ -0.47
TREM2-201ENST00000338469 TCRBV21S2A2A0A5A6 115 aa12.09□□□□□ -0.47
TREM2-201ENST00000338469 LNP1A1A4G5 178 aa12.09□□□□□ -0.47
TREM2-201ENST00000338469 C4orf47A7E2U8 309 aa12.09□□□□□ -0.47
TREM2-201ENST00000338469 CDX4O14627 284 aaPredicted RBP12.09□□□□□ -0.47
TREM2-201ENST00000338469 GIPC1O14908 333 aa12.09□□□□□ -0.47
TREM2-201ENST00000338469 NRDCO43847 1150 aa12.09□□□□□ -0.47
TREM2-201ENST00000338469 CACNG3O60359 315 aa12.09□□□□□ -0.47
TREM2-201ENST00000338469 RHOBTB1O94844 696 aa12.09□□□□□ -0.47
TREM2-201ENST00000338469 LSM8O95777 96 aaKnown RBP12.09□□□□□ -0.47
TREM2-201ENST00000338469 SETSIPP0DME0 302 aa12.09□□□□□ -0.47
TREM2-201ENST00000338469 FECHP22830 423 aa12.09□□□□□ -0.47
TREM2-201ENST00000338469 EIF4A3P38919 411 aaKnown RBP12.09□□□□□ -0.47
TREM2-201ENST00000338469 PLA2G4AP47712 749 aa12.09□□□□□ -0.47
TREM2-201ENST00000338469 PDE4CQ08493 712 aa12.09□□□□□ -0.47
TREM2-201ENST00000338469 EFEMP1Q12805 493 aa12.09□□□□□ -0.47
TREM2-201ENST00000338469 ELF2Q15723 593 aa12.09□□□□□ -0.47
TREM2-201ENST00000338469 EOGTQ5NDL2 527 aa12.09□□□□□ -0.47
TREM2-201ENST00000338469 ARMCX6Q7L4S7 300 aa12.09□□□□□ -0.47
TREM2-201ENST00000338469 TMTC1Q8IUR5 882 aa12.09□□□□□ -0.47
TREM2-201ENST00000338469 LRRC8AQ8IWT6 810 aa12.09□□□□□ -0.47
TREM2-201ENST00000338469 ZNF276Q8N554 614 aa12.09□□□□□ -0.47
TREM2-201ENST00000338469 ZNF513Q8N8E2 541 aaPredicted RBP12.09□□□□□ -0.47
TREM2-201ENST00000338469 TMEM35BQ8NCS4 154 aa12.09□□□□□ -0.47
TREM2-201ENST00000338469 CCDC112Q8NEF3 446 aa12.09□□□□□ -0.47
TREM2-201ENST00000338469 SYT11Q9BT88 431 aa12.09□□□□□ -0.47
TREM2-201ENST00000338469 LHX5Q9H2C1 402 aa12.09□□□□□ -0.47
TREM2-201ENST00000338469 NHEJ1Q9H9Q4 299 aaPredicted RBP12.09□□□□□ -0.47
TREM2-201ENST00000338469 FSCN3Q9NQT6 498 aa12.09□□□□□ -0.47
TREM2-201ENST00000338469 DNMT3LQ9UJW3 386 aa12.09□□□□□ -0.47
TREM2-201ENST00000338469 FRYQ5TBA9 3013 aa12.08□□□□□ -0.47
TREM2-201ENST00000338469 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.08□□□□□ -0.48
TREM2-201ENST00000338469 XPO1O14980 1071 aaKnown RBP12.08□□□□□ -0.48
TREM2-201ENST00000338469 AKR1B10O60218 316 aa12.08□□□□□ -0.48
TREM2-201ENST00000338469 KCNA4P22459 653 aa12.08□□□□□ -0.48
TREM2-201ENST00000338469 DHPSP49366 369 aaPredicted RBP12.08□□□□□ -0.48
TREM2-201ENST00000338469 GEN1Q17RS7 908 aa12.08□□□□□ -0.48
TREM2-201ENST00000338469 CLEC16AQ2KHT3 1053 aa12.08□□□□□ -0.48
TREM2-201ENST00000338469 PKDCCQ504Y2 493 aa12.08□□□□□ -0.48
TREM2-201ENST00000338469 FYB2Q5VWT5 728 aa12.08□□□□□ -0.48
TREM2-201ENST00000338469 BTBD8Q5XKL5 378 aa12.08□□□□□ -0.48
TREM2-201ENST00000338469 PM20D1Q6GTS8 502 aa12.08□□□□□ -0.48
TREM2-201ENST00000338469 GRAMD4Q6IC98 578 aa12.08□□□□□ -0.48
TREM2-201ENST00000338469 C1orf131Q8NDD1 294 aaKnown RBP12.08□□□□□ -0.48
TREM2-201ENST00000338469 PIGKQ92643 395 aa12.08□□□□□ -0.48
TREM2-201ENST00000338469 CCDC42Q96M95 316 aa12.08□□□□□ -0.48
TREM2-201ENST00000338469 NOX5Q96PH1 765 aa12.08□□□□□ -0.48
TREM2-201ENST00000338469 ULBP1Q9BZM6 244 aa12.08□□□□□ -0.48
TREM2-201ENST00000338469 UBXN6Q9BZV1 441 aa12.08□□□□□ -0.48
TREM2-201ENST00000338469 CACNA2D2Q9NY47 1150 aa12.08□□□□□ -0.48
TREM2-201ENST00000338469 CLIC5Q9NZA1 410 aa12.08□□□□□ -0.48
TREM2-201ENST00000338469 ADAMTS1Q9UHI8 967 aa12.08□□□□□ -0.48
TREM2-201ENST00000338469 RASAL2Q9UJF2 1139 aa12.08□□□□□ -0.48
TREM2-201ENST00000338469 AGO1Q9UL18 857 aaKnown RBP12.08□□□□□ -0.48
TREM2-201ENST00000338469 ASCC3Q8N3C0 2202 aaKnown RBP12.08□□□□□ -0.48
TREM2-201ENST00000338469 PI4KAP42356 2102 aa12.08□□□□□ -0.48
TREM2-201ENST00000338469 PLXND1Q9Y4D7 1925 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms