RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 EHBP1Q8NDI1 1231 aa11.11□□□□□ -0.63
CAPN3-202ENST00000337571 WFIKKN2Q8TEU8 576 aa11.11□□□□□ -0.63
CAPN3-202ENST00000337571 SLC35F5Q8WV83 523 aa11.11□□□□□ -0.63
CAPN3-202ENST00000337571 NELFBQ8WX92 580 aa11.11□□□□□ -0.63
CAPN3-202ENST00000337571 DDX50Q9BQ39 737 aaKnown RBP11.11□□□□□ -0.63
CAPN3-202ENST00000337571 ZDHHC5Q9C0B5 715 aa11.11□□□□□ -0.63
CAPN3-202ENST00000337571 MKRN2Q9H000 416 aaKnown RBP11.11□□□□□ -0.63
CAPN3-202ENST00000337571 MIR1-1HGQ9H1L0 117 aa11.11□□□□□ -0.63
CAPN3-202ENST00000337571 CAPN10Q9HC96 672 aa11.11□□□□□ -0.63
CAPN3-202ENST00000337571 CD248Q9HCU0 757 aa11.11□□□□□ -0.63
CAPN3-202ENST00000337571 FSCN3Q9NQT6 498 aa11.11□□□□□ -0.63
CAPN3-202ENST00000337571 WSB2Q9NYS7 404 aaPredicted RBP11.11□□□□□ -0.63
CAPN3-202ENST00000337571 MAN1B1Q9UKM7 699 aa11.11□□□□□ -0.63
CAPN3-202ENST00000337571 PCDHB9Q9Y5E1 797 aa11.11□□□□□ -0.63
CAPN3-202ENST00000337571 IRAK2O43187 625 aa11.1□□□□□ -0.63
CAPN3-202ENST00000337571 FBXO21O94952 628 aa11.1□□□□□ -0.63
CAPN3-202ENST00000337571 PROS1P07225 676 aa11.1□□□□□ -0.63
CAPN3-202ENST00000337571 KRT5P13647 590 aa11.1□□□□□ -0.63
CAPN3-202ENST00000337571 POLR2EP19388 210 aaKnown RBP11.1□□□□□ -0.63
CAPN3-202ENST00000337571 MAOBP27338 520 aa11.1□□□□□ -0.63
CAPN3-202ENST00000337571 TBX4P57082 545 aa11.1□□□□□ -0.63
CAPN3-202ENST00000337571 SIM1P81133 766 aaPredicted RBP11.1□□□□□ -0.63
CAPN3-202ENST00000337571 SLC14A1Q13336 389 aa11.1□□□□□ -0.63
CAPN3-202ENST00000337571 PMF1Q6P1K2 205 aa11.1□□□□□ -0.63
CAPN3-202ENST00000337571 CHST9Q7L1S5 443 aa11.1□□□□□ -0.63
CAPN3-202ENST00000337571 BHLHA9Q7RTU4 235 aa11.1□□□□□ -0.63
CAPN3-202ENST00000337571 CREBRFQ8IUR6 639 aa11.1□□□□□ -0.63
CAPN3-202ENST00000337571 AHI1Q8N157 1196 aa11.1□□□□□ -0.63
CAPN3-202ENST00000337571 SORCS1Q8WY21 1168 aa11.1□□□□□ -0.63
CAPN3-202ENST00000337571 TFAP2BQ92481 460 aa11.1□□□□□ -0.63
CAPN3-202ENST00000337571 P2RY11Q96G91 374 aa11.1□□□□□ -0.63
CAPN3-202ENST00000337571 HSFY1Q96LI6 401 aa11.1□□□□□ -0.63
CAPN3-202ENST00000337571 IRX2Q9BZI1 471 aaPredicted RBP11.1□□□□□ -0.63
CAPN3-202ENST00000337571 MIS12Q9H081 205 aa11.1□□□□□ -0.63
CAPN3-202ENST00000337571 CD93Q9NPY3 652 aa11.1□□□□□ -0.63
CAPN3-202ENST00000337571 ST7Q9NRC1 585 aa11.1□□□□□ -0.63
CAPN3-202ENST00000337571 USP36Q9P275 1121 aaKnown RBP11.1□□□□□ -0.63
CAPN3-202ENST00000337571 SUN2Q9UH99 717 aa11.1□□□□□ -0.63
CAPN3-202ENST00000337571 STOML2Q9UJZ1 356 aa11.1□□□□□ -0.63
CAPN3-202ENST00000337571 CLEC4EQ9ULY5 219 aa11.1□□□□□ -0.63
CAPN3-202ENST00000337571 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.1□□□□□ -0.63
CAPN3-202ENST00000337571 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.1□□□□□ -0.63
CAPN3-202ENST00000337571 FRYQ5TBA9 3013 aa11.09□□□□□ -0.63
CAPN3-202ENST00000337571 CNOT1A5YKK6 2376 aaKnown RBP11.09□□□□□ -0.63
CAPN3-202ENST00000337571 A0A1B0GTW7 788 aa11.09□□□□□ -0.63
CAPN3-202ENST00000337571 SPAARA0A1B0GVQ0 90 aa11.09□□□□□ -0.63
CAPN3-202ENST00000337571 METTL12A8MUP2 240 aa11.09□□□□□ -0.63
CAPN3-202ENST00000337571 H0Y626 953 aa11.09□□□□□ -0.63
CAPN3-202ENST00000337571 RNF225M0QZC1 329 aaPredicted RBP11.09□□□□□ -0.63
CAPN3-202ENST00000337571 CAPN9O14815 690 aa11.09□□□□□ -0.63
CAPN3-202ENST00000337571 SART1O43290 800 aaKnown RBP11.09□□□□□ -0.63
CAPN3-202ENST00000337571 MSI1O43347 362 aaKnown RBP11.09□□□□□ -0.63
CAPN3-202ENST00000337571 MED7O43513 233 aa11.09□□□□□ -0.63
CAPN3-202ENST00000337571 TBL1XO60907 577 aa11.09□□□□□ -0.63
CAPN3-202ENST00000337571 TRIM16O95361 564 aa11.09□□□□□ -0.63
CAPN3-202ENST00000337571 AFPP02771 609 aaKnown RBP11.09□□□□□ -0.63
CAPN3-202ENST00000337571 LTFP02788 710 aa11.09□□□□□ -0.63
CAPN3-202ENST00000337571 PRKCHP24723 683 aa11.09□□□□□ -0.63
CAPN3-202ENST00000337571 BRD2P25440 801 aaKnown RBP11.09□□□□□ -0.63
CAPN3-202ENST00000337571 HOXD9P28356 352 aaPredicted RBP11.09□□□□□ -0.63
CAPN3-202ENST00000337571 HLA-FP30511 346 aa11.09□□□□□ -0.63
CAPN3-202ENST00000337571 ST8SIA6P61647 398 aa11.09□□□□□ -0.63
CAPN3-202ENST00000337571 GCNT1Q02742 428 aa11.09□□□□□ -0.63
CAPN3-202ENST00000337571 RING1Q06587 406 aa11.09□□□□□ -0.63
CAPN3-202ENST00000337571 KCNH2Q12809 1159 aa11.09□□□□□ -0.63
CAPN3-202ENST00000337571 PKDCCQ504Y2 493 aa11.09□□□□□ -0.63
CAPN3-202ENST00000337571 MPP7Q5T2T1 576 aa11.09□□□□□ -0.63
CAPN3-202ENST00000337571 DCAF12L1Q5VU92 463 aa11.09□□□□□ -0.63
CAPN3-202ENST00000337571 TMEM215Q68D42 235 aa11.09□□□□□ -0.63
CAPN3-202ENST00000337571 MSANTD2Q6P1R3 559 aa11.09□□□□□ -0.63
CAPN3-202ENST00000337571 FOXR2Q6PJQ5 311 aa11.09□□□□□ -0.63
CAPN3-202ENST00000337571 UNQ6494/PRO21346Q6UXR6 183 aa11.09□□□□□ -0.63
CAPN3-202ENST00000337571 FAM124AQ86V42 546 aa11.09□□□□□ -0.63
CAPN3-202ENST00000337571 CACUL1Q86Y37 369 aa11.09□□□□□ -0.63
CAPN3-202ENST00000337571 SCUBE3Q8IX30 993 aa11.09□□□□□ -0.63
CAPN3-202ENST00000337571 UBR7Q8N806 425 aa11.09□□□□□ -0.63
CAPN3-202ENST00000337571 RBBP8NLQ8NC74 664 aaPredicted RBP11.09□□□□□ -0.63
CAPN3-202ENST00000337571 OR2T3Q8NH03 318 aa11.09□□□□□ -0.63
CAPN3-202ENST00000337571 CYB5D2Q8WUJ1 264 aa11.09□□□□□ -0.63
CAPN3-202ENST00000337571 DNASE2BQ8WZ79 361 aa11.09□□□□□ -0.63
CAPN3-202ENST00000337571 AZIN2Q96A70 460 aa11.09□□□□□ -0.63
CAPN3-202ENST00000337571 TRIM62Q9BVG3 475 aa11.09□□□□□ -0.63
CAPN3-202ENST00000337571 SRRTQ9BXP5 876 aaKnown RBP11.09□□□□□ -0.63
CAPN3-202ENST00000337571 ABCB8Q9NUT2 735 aa11.09□□□□□ -0.63
CAPN3-202ENST00000337571 DNAAF2Q9NVR5 837 aaKnown RBP11.09□□□□□ -0.63
CAPN3-202ENST00000337571 GGA2Q9UJY4 613 aa11.09□□□□□ -0.63
CAPN3-202ENST00000337571 CTNND2Q9UQB3 1225 aa11.09□□□□□ -0.63
CAPN3-202ENST00000337571 NFE2L3Q9Y4A8 694 aa11.09□□□□□ -0.63
CAPN3-202ENST00000337571 KMT2BQ9UMN6 2715 aaPredicted RBP11.09□□□□□ -0.63
CAPN3-202ENST00000337571 ACACBO00763 2458 aa11.09□□□□□ -0.63
CAPN3-202ENST00000337571 KCNJ18B7U540 433 aa11.08□□□□□ -0.64
CAPN3-202ENST00000337571 PPP1R3GB7ZBB8 358 aa11.08□□□□□ -0.64
CAPN3-202ENST00000337571 BIN1O00499 593 aa11.08□□□□□ -0.64
CAPN3-202ENST00000337571 BCAT2O15382 392 aaPredicted RBP11.08□□□□□ -0.64
CAPN3-202ENST00000337571 ACSL4O60488 711 aa11.08□□□□□ -0.64
CAPN3-202ENST00000337571 DNTTP04053 509 aa11.08□□□□□ -0.64
CAPN3-202ENST00000337571 PABPC1P11940 636 aaKnown RBP11.08□□□□□ -0.64
CAPN3-202ENST00000337571 HLA-EP13747 358 aa11.08□□□□□ -0.64
CAPN3-202ENST00000337571 SPINK2P20155 84 aa11.08□□□□□ -0.64
CAPN3-202ENST00000337571 ACADSBP45954 432 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms