RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 DHX33Q9H6R0 707 aaKnown RBP11.71□□□□□ -0.54
COL4A5-201ENST00000328300 NPHS2Q9NP85 383 aa11.71□□□□□ -0.54
COL4A5-201ENST00000328300 FAM105AQ9NUU6 356 aa11.71□□□□□ -0.54
COL4A5-201ENST00000328300 H0Y3Z8 333 aa11.71□□□□□ -0.54
COL4A5-201ENST00000328300 ACTN3Q08043 901 aaPredicted RBP11.71□□□□□ -0.54
COL4A5-201ENST00000328300 LYPLAL1Q5VWZ2 237 aa11.71□□□□□ -0.54
COL4A5-201ENST00000328300 PARP9Q8IXQ6 854 aa11.71□□□□□ -0.54
COL4A5-201ENST00000328300 CEP70Q8NHQ1 597 aa11.71□□□□□ -0.54
COL4A5-201ENST00000328300 ATXN3LQ9H3M9 355 aa11.71□□□□□ -0.54
COL4A5-201ENST00000328300 PCYOX1Q9UHG3 505 aa11.71□□□□□ -0.54
COL4A5-201ENST00000328300 CBX4O00257 560 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 ACAT1P24752 427 aaKnown RBP11.7□□□□□ -0.54
COL4A5-201ENST00000328300 ILDR2Q71H61 639 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 SH3BP5LQ7L8J4 393 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 HJURPQ8NCD3 748 aaPredicted RBP11.7□□□□□ -0.54
COL4A5-201ENST00000328300 C2orf15Q8WU43 125 aaKnown RBP11.7□□□□□ -0.54
COL4A5-201ENST00000328300 ZNF333Q96JL9 665 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 IARS2Q9NSE4 1012 aaKnown RBP11.7□□□□□ -0.54
COL4A5-201ENST00000328300 TEKT2Q9UIF3 430 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 L1RE1Q9UN81 338 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 TMEM150BA6NC51 233 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 KIF1CO43896 1103 aaKnown RBP11.7□□□□□ -0.54
COL4A5-201ENST00000328300 THRAP10827 490 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 HSPA13P48723 471 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 CASP5P51878 434 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 DRG2P55039 364 aaKnown RBP11.7□□□□□ -0.54
COL4A5-201ENST00000328300 NUP93Q8N1F7 819 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 CLEC4DQ8WXI8 215 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 ACSF2Q96CM8 615 aaPredicted RBP11.7□□□□□ -0.54
COL4A5-201ENST00000328300 FAM118BQ9BPY3 351 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 DUSP10Q9Y6W6 482 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 IGLV3-22A0A075B6J6 115 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 A0A087X1B8 175 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 TGFB1I1O43294 461 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 ABHD2P08910 425 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 YBX3P16989 372 aaKnown RBP eCLIP11.7□□□□□ -0.54
COL4A5-201ENST00000328300 CYP2A7P20853 494 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 CDC25CP30307 473 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 GRK3P35626 688 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 GRM3Q14832 879 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 STRA8Q7Z7C7 330 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 RNF217Q8TC41 542 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 HASPINQ8TF76 798 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 BAP1Q92560 729 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 THOC1Q96FV9 657 aaKnown RBP11.7□□□□□ -0.54
COL4A5-201ENST00000328300 DUSP16Q9BY84 665 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 SOX13Q9UN79 622 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 MAPRE3Q9UPY8 281 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 FAM32AQ9Y421 112 aaKnown RBP11.7□□□□□ -0.54
COL4A5-201ENST00000328300 ALDH1A2O94788 518 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 CYP1A1P04798 512 aaPredicted RBP11.7□□□□□ -0.54
COL4A5-201ENST00000328300 NOMO3P69849 1222 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 WSCD1Q658N2 575 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 LGI2Q8N0V4 545 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 SH3GL1Q99961 368 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 SPG21Q9NZD8 308 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 CCT8L1PA6NM43 557 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 ZBTB39O15060 712 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 SEPT4O43236 478 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 SERPINA4P29622 427 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 NAA30Q147X3 362 aaPredicted RBP11.7□□□□□ -0.54
COL4A5-201ENST00000328300 MFSD7Q6UXD7 560 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 FBXO25Q8TCJ0 367 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 REPS1Q96D71 796 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 PGM2Q96G03 612 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 ACTL7BQ9Y614 415 aa11.7□□□□□ -0.54
COL4A5-201ENST00000328300 A0A0A0MRY4 1105 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 C16orf96A6NNT2 1141 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 TRUB2O95900 331 aaKnown RBP11.69□□□□□ -0.54
COL4A5-201ENST00000328300 MMP13P45452 471 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 FLT3LGP49771 235 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 SKOR1P84550 965 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 ADCK2Q7Z695 626 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 HS6ST3Q8IZP7 471 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 ARMC2Q8NEN0 867 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 STARD8Q92502 1023 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 SPATA13Q96N96 652 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 IL22Q9GZX6 179 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 RUBCNLQ9H714 662 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 CTNNAL1Q9UBT7 734 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 AP3M1Q9Y2T2 418 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 MAML3Q96JK9 1138 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 APOL5Q9BWW9 433 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 SENP6Q9GZR1 1112 aaPredicted RBP11.69□□□□□ -0.54
COL4A5-201ENST00000328300 TKTL2Q9H0I9 626 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 ASAH2Q9NR71 780 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 NCKAP1Q9Y2A7 1128 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 SRRM3A6NNA2 597 aaPredicted RBP11.69□□□□□ -0.54
COL4A5-201ENST00000328300 RNF103O00237 685 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 KPNA5O15131 536 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 CCNE2O96020 404 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 OR56A5P0C7T3 313 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 PPP3CCP48454 512 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 ITGA7Q13683 1181 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 UGCGQ16739 394 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 BBS12Q6ZW61 710 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 STRADAQ7RTN6 431 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 FNIP1Q8TF40 1166 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 ARL8AQ96BM9 186 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 NAF1Q96HR8 494 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms