RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 TRPM5Q9NZQ8 1165 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 PDE2AO00408 941 aaPredicted RBP11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 LIASO43766 372 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 SMNDC1O75940 238 aaKnown RBP eCLIP11.17□□□□□ -0.622e-6■■□□□ 13
SNRNP200-201ENST00000323853 CDH8P55286 799 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 ETNPPLQ8TBG4 499 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 EPS8L1Q8TE68 723 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 GLMNQ92990 594 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 VPS33AQ96AX1 596 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 IMPAD1Q9NX62 359 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 SNCAIPQ9Y6H5 919 aa11.17□□□□□ -0.62
SNRNP200-201ENST00000323853 TPP1O14773 563 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 SOX6P35712 828 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 CACNA2D1P54289 1103 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 TBX4P57082 545 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 ELF3P78545 371 aaPredicted RBP11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 GTF2BQ00403 316 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 MTA1Q13330 715 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 MICU2Q8IYU8 434 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 DEFB106AQ8N104 65 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 NUP107P57740 925 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 CCDC142Q17RM4 750 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 C15orf52Q6ZUT6 534 aaKnown RBP11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 MREGQ8N565 214 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 TRAPPC12Q8WVT3 735 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 C10orf88Q9H8K7 445 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 SFMBT1Q9UHJ3 866 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 SAC3D1A6NKF1 404 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 F8VP50 259 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 CBX4O00257 560 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 VPS4BO75351 444 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 BAIAP3O94812 1187 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 CLPTM1O96005 669 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 ARL4DP49703 201 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 NUMBP49757 651 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 CDK7P50613 346 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 ANXA11P50995 505 aaKnown RBP11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 YWHAZP63104 245 aaKnown RBP11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 DDX39BQ13838 428 aaKnown RBP11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 FASTKQ14296 549 aaKnown RBP11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 MARC1Q5VT66 337 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 NPNTQ6UXI9 565 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 KYAT3Q6YP21 454 aaKnown RBP11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 RIPOR1Q6ZS17 1223 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 DNAJC19Q96DA6 116 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 WDR18Q9BV38 432 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 TMEM106CQ9BVX2 250 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 VTA1Q9NP79 307 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 POLG2Q9UHN1 485 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 TIMM13Q9Y5L4 95 aaPredicted RBP11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 RCCD1A6NED2 376 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 E5RJQ4 531 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 TRIM13O60858 407 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 ZNF682O95780 498 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 CALCAP01258 141 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 IMPDH2P12268 514 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 CNGA2Q16280 664 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 LRRC74BQ6ZQY2 392 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 ZBTB49Q6ZSB9 765 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 CYP4Z1Q86W10 505 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 CROTQ9UKG9 612 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 MYO5BQ9ULV0 1848 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 A0A096LPK6 155 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 PDHXO00330 501 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 TRUB2O95900 331 aaKnown RBP11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 ZSCAN5DPP0CG00 497 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 RBL1P28749 1068 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 MAD2L1Q13257 205 aaPredicted RBP11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 SLC2A14Q8TDB8 520 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 BAP1Q92560 729 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 PHF21BQ96EK2 531 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 ACOX2Q99424 681 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 RGS18Q9NS28 235 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 KCNK4Q9NYG8 393 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 FAM198AQ9UFP1 575 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 PCDHB5Q9Y5E4 795 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 CCNT2O60583 730 aaKnown RBP11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 GSNP06396 782 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 SLC2A4P14672 509 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 TUBP50607 506 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 ALDH6A1Q02252 535 aaKnown RBP11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 ARMC6Q6NXE6 501 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 CES3Q6UWW8 571 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 DHFR2Q86XF0 187 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 CKAP2Q8WWK9 683 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 MTIF3Q9H2K0 278 aaKnown RBP11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 RABGEF1Q9UJ41 708 aa11.16□□□□□ -0.62
SNRNP200-201ENST00000323853 SIGLEC16A6NMB1 481 aa11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 EPHB6O15197 1021 aa11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 DDHD2O94830 711 aa11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 POMCP01189 267 aa11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 EPHB3P54753 998 aa11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 CCDC15Q0P6D6 951 aa11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 ACBD5Q5T8D3 534 aaPredicted RBP11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 PACS2Q86VP3 889 aa11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 PPP2R3CQ969Q6 453 aa11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 FBXO44Q9H4M3 255 aa11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 DLGAP3O95886 979 aa11.15□□□□□ -0.62
SNRNP200-201ENST00000323853 EPHX2P34913 555 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms