RNA–Protein interactions for RNA: ENST00000322918.9

CD46-202, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-202ENST00000322918 C11orf84Q9BUA3 381 aaPredicted RBP9.41□□□□□ -0.9
CD46-202ENST00000322918 KIF9Q9HAQ2 790 aa9.41□□□□□ -0.9
CD46-202ENST00000322918 USP29Q9HBJ7 922 aa9.41□□□□□ -0.9
CD46-202ENST00000322918 ETNK1Q9HBU6 452 aa9.41□□□□□ -0.9
CD46-202ENST00000322918 IL1RAPL1Q9NZN1 696 aa9.41□□□□□ -0.9
CD46-202ENST00000322918 GOLGA8RI6L899 631 aa9.41□□□□□ -0.9
CD46-202ENST00000322918 SPAG7O75391 227 aa9.41□□□□□ -0.9
CD46-202ENST00000322918 ENDOD1O94919 500 aa9.41□□□□□ -0.9
CD46-202ENST00000322918 FBXO21O94952 628 aa9.41□□□□□ -0.9
CD46-202ENST00000322918 CYP11A1P05108 521 aa9.41□□□□□ -0.9
CD46-202ENST00000322918 FAM189BP81408 668 aa9.41□□□□□ -0.9
CD46-202ENST00000322918 PPP2R5DQ14738 602 aa9.41□□□□□ -0.9
CD46-202ENST00000322918 PPP1R21Q6ZMI0 780 aa9.41□□□□□ -0.9
CD46-202ENST00000322918 C3orf62Q6ZUJ4 267 aa9.41□□□□□ -0.9
CD46-202ENST00000322918 CENPUQ71F23 418 aa9.41□□□□□ -0.9
CD46-202ENST00000322918 HOOK3Q86VS8 718 aa9.41□□□□□ -0.9
CD46-202ENST00000322918 PPIL6Q8IXY8 311 aa9.41□□□□□ -0.9
CD46-202ENST00000322918 OTUD6BQ8N6M0 293 aa9.41□□□□□ -0.9
CD46-202ENST00000322918 TEKT4Q8WW24 435 aa9.41□□□□□ -0.9
CD46-202ENST00000322918 WDR6Q9NNW5 1121 aaKnown RBP9.41□□□□□ -0.9
CD46-202ENST00000322918 MARCH5Q9NX47 278 aa9.41□□□□□ -0.9
CD46-202ENST00000322918 PDCD11Q14690 1871 aaKnown RBP9.41□□□□□ -0.9
CD46-202ENST00000322918 HMGB1P1B2RPK0 211 aaPredicted RBP9.4□□□□□ -0.9
CD46-202ENST00000322918 H3BRJ5 948 aa9.4□□□□□ -0.9
CD46-202ENST00000322918 EIF3HO15372 352 aaKnown RBP eCLIP9.4□□□□□ -0.9
CD46-202ENST00000322918 LRIG2O94898 1065 aa9.4□□□□□ -0.9
CD46-202ENST00000322918 VAV1P15498 845 aa9.4□□□□□ -0.9
CD46-202ENST00000322918 PTPN7P35236 360 aa9.4□□□□□ -0.9
CD46-202ENST00000322918 ELK3P41970 407 aa9.4□□□□□ -0.9
CD46-202ENST00000322918 SESN2P58004 480 aaPredicted RBP9.4□□□□□ -0.9
CD46-202ENST00000322918 ZNF280DQ6N043 979 aa9.4□□□□□ -0.9
CD46-202ENST00000322918 LRIG3Q6UXM1 1119 aa9.4□□□□□ -0.9
CD46-202ENST00000322918 BHLHA9Q7RTU4 235 aa9.4□□□□□ -0.9
CD46-202ENST00000322918 PID1Q7Z2X4 250 aa9.4□□□□□ -0.9
CD46-202ENST00000322918 NPAS4Q8IUM7 802 aa9.4□□□□□ -0.9
CD46-202ENST00000322918 CTAGE3PQ8IX95 158 aa9.4□□□□□ -0.9
CD46-202ENST00000322918 PDIK1LQ8N165 341 aa9.4□□□□□ -0.9
CD46-202ENST00000322918 NPWQ8N729 165 aa9.4□□□□□ -0.9
CD46-202ENST00000322918 BBOF1Q8ND07 529 aa9.4□□□□□ -0.9
CD46-202ENST00000322918 GDAP1Q8TB36 358 aa9.4□□□□□ -0.9
CD46-202ENST00000322918 TFB1MQ8WVM0 346 aaKnown RBP9.4□□□□□ -0.9
CD46-202ENST00000322918 BHMTQ93088 406 aa9.4□□□□□ -0.9
CD46-202ENST00000322918 SLC2A13Q96QE2 648 aa9.4□□□□□ -0.9
CD46-202ENST00000322918 MCM8Q9UJA3 840 aa9.4□□□□□ -0.9
CD46-202ENST00000322918 PCDHB5Q9Y5E4 795 aa9.4□□□□□ -0.9
CD46-202ENST00000322918 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.4□□□□□ -0.9
CD46-202ENST00000322918 KIAA0754O94854 1291 aa9.4□□□□□ -0.9
CD46-202ENST00000322918 KRT15P19012 456 aa9.4□□□□□ -0.9
CD46-202ENST00000322918 AUHQ13825 339 aaKnown RBP9.4□□□□□ -0.9
CD46-202ENST00000322918 MORF4L2Q15014 288 aa9.4□□□□□ -0.9
CD46-202ENST00000322918 TAZQ16635 292 aa9.4□□□□□ -0.9
CD46-202ENST00000322918 ARL13BQ3SXY8 428 aa9.4□□□□□ -0.9
CD46-202ENST00000322918 RAB41Q5JT25 222 aa9.4□□□□□ -0.9
CD46-202ENST00000322918 C10orf120Q5SQS8 335 aa9.4□□□□□ -0.9
CD46-202ENST00000322918 SLC9A4Q6AI14 798 aa9.4□□□□□ -0.9
CD46-202ENST00000322918 DRICH1Q6PGQ1 229 aaPredicted RBP9.4□□□□□ -0.9
CD46-202ENST00000322918 CES3Q6UWW8 571 aa9.4□□□□□ -0.9
CD46-202ENST00000322918 SCD5Q86SK9 330 aa9.4□□□□□ -0.9
CD46-202ENST00000322918 CIR1Q86X95 450 aaPredicted RBP9.4□□□□□ -0.9
CD46-202ENST00000322918 DCP1BQ8IZD4 617 aaKnown RBP9.4□□□□□ -0.9
CD46-202ENST00000322918 C4orf33Q8N1A6 199 aa9.4□□□□□ -0.9
CD46-202ENST00000322918 PDCD7Q8N8D1 485 aaKnown RBP9.4□□□□□ -0.9
CD46-202ENST00000322918 ARHGEF2Q92974 986 aaKnown RBP9.4□□□□□ -0.9
CD46-202ENST00000322918 FBXO32Q969P5 355 aa9.4□□□□□ -0.9
CD46-202ENST00000322918 NACA2Q9H009 215 aa9.4□□□□□ -0.9
CD46-202ENST00000322918 OGDHLQ9ULD0 1010 aa9.4□□□□□ -0.9
CD46-202ENST00000322918 VANGL2Q9ULK5 521 aa9.4□□□□□ -0.9
CD46-202ENST00000322918 SQORQ9Y6N5 450 aa9.4□□□□□ -0.9
CD46-202ENST00000322918 SF3B1O75533 1304 aaKnown RBP eCLIP9.4□□□□□ -0.92e-8■■■□□ 15.4
CD46-202ENST00000322918 RNF103O00237 685 aa9.4□□□□□ -0.91
CD46-202ENST00000322918 NDUFAB1O14561 156 aa9.4□□□□□ -0.91
CD46-202ENST00000322918 TRDMT1O14717 391 aaKnown RBP9.4□□□□□ -0.91
CD46-202ENST00000322918 CHUKO15111 745 aa9.4□□□□□ -0.91
CD46-202ENST00000322918 RPL34P49207 117 aaKnown RBP9.4□□□□□ -0.91
CD46-202ENST00000322918 ARL4CP56559 192 aa9.4□□□□□ -0.91
CD46-202ENST00000322918 ACTN3Q08043 901 aaPredicted RBP9.4□□□□□ -0.91
CD46-202ENST00000322918 TAF10Q12962 218 aa9.4□□□□□ -0.91
CD46-202ENST00000322918 IKBKEQ14164 716 aa9.4□□□□□ -0.91
CD46-202ENST00000322918 MAPRE1Q15691 268 aaKnown RBP9.4□□□□□ -0.91
CD46-202ENST00000322918 PSMD5Q16401 504 aa9.4□□□□□ -0.91
CD46-202ENST00000322918 LRRC26Q2I0M4 334 aa9.4□□□□□ -0.91
CD46-202ENST00000322918 NAIF1Q69YI7 327 aaPredicted RBP9.4□□□□□ -0.91
CD46-202ENST00000322918 ARHGAP36Q6ZRI8 547 aa9.4□□□□□ -0.91
CD46-202ENST00000322918 TRMT10CQ7L0Y3 403 aaKnown RBP9.4□□□□□ -0.91
CD46-202ENST00000322918 HTR3CQ8WXA8 447 aa9.4□□□□□ -0.91
CD46-202ENST00000322918 P2RY11Q96G91 374 aa9.4□□□□□ -0.91
CD46-202ENST00000322918 PKMYT1Q99640 499 aa9.4□□□□□ -0.91
CD46-202ENST00000322918 CSNK1G1Q9HCP0 422 aa9.4□□□□□ -0.91
CD46-202ENST00000322918 NDFIP2Q9NV92 336 aa9.4□□□□□ -0.91
CD46-202ENST00000322918 KLHL8Q9P2G9 620 aaPredicted RBP9.4□□□□□ -0.91
CD46-202ENST00000322918 FBXW11Q9UKB1 542 aa9.4□□□□□ -0.91
CD46-202ENST00000322918 EFR3BQ9Y2G0 817 aa9.4□□□□□ -0.91
CD46-202ENST00000322918 MYO9BQ13459 2157 aa9.39□□□□□ -0.91
CD46-202ENST00000322918 HGSO14964 777 aaPredicted RBP9.39□□□□□ -0.91
CD46-202ENST00000322918 PAGE1O75459 146 aa9.39□□□□□ -0.91
CD46-202ENST00000322918 TGM2P21980 687 aa9.39□□□□□ -0.91
CD46-202ENST00000322918 STIP1P31948 543 aaKnown RBP9.39□□□□□ -0.91
CD46-202ENST00000322918 LBX1P52954 281 aa9.39□□□□□ -0.91
CD46-202ENST00000322918 PRMT2P55345 433 aa9.39□□□□□ -0.91
CD46-202ENST00000322918 EIF3BP55884 814 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms