RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 PDK3Q15120 406 aa16.83■□□□□ 0.28
SFXN1-201ENST00000321442 ACBD5Q5T8D3 534 aaPredicted RBP16.83■□□□□ 0.28
SFXN1-201ENST00000321442 ARMC3Q5W041 872 aa16.83■□□□□ 0.28
SFXN1-201ENST00000321442 MPZL3Q6UWV2 235 aa16.83■□□□□ 0.28
SFXN1-201ENST00000321442 FRA10AC1Q70Z53 315 aa16.83■□□□□ 0.28
SFXN1-201ENST00000321442 DHDDSQ86SQ9 333 aa16.83■□□□□ 0.28
SFXN1-201ENST00000321442 VPS50Q96JG6 964 aa16.83■□□□□ 0.28
SFXN1-201ENST00000321442 NAT9Q9BTE0 207 aa16.83■□□□□ 0.28
SFXN1-201ENST00000321442 ZBED2Q9BTP6 218 aa16.83■□□□□ 0.28
SFXN1-201ENST00000321442 CCDC167Q9P0B6 97 aa16.83■□□□□ 0.28
SFXN1-201ENST00000321442 ZNF862O60290 1169 aa16.82■□□□□ 0.28
SFXN1-201ENST00000321442 EIF4BP23588 611 aaKnown RBP16.82■□□□□ 0.28
SFXN1-201ENST00000321442 SERPINB8P50452 374 aa16.82■□□□□ 0.28
SFXN1-201ENST00000321442 NCKAP1LP55160 1127 aa16.82■□□□□ 0.28
SFXN1-201ENST00000321442 ACSBG2Q5FVE4 666 aa16.82■□□□□ 0.28
SFXN1-201ENST00000321442 NDNQ99608 321 aa16.82■□□□□ 0.28
SFXN1-201ENST00000321442 MAGEB5Q9BZ81 275 aa16.82■□□□□ 0.28
SFXN1-201ENST00000321442 ACSS2Q9NR19 701 aa16.82■□□□□ 0.28
SFXN1-201ENST00000321442 SNCAIPQ9Y6H5 919 aa16.82■□□□□ 0.28
SFXN1-201ENST00000321442 AHDC1Q5TGY3 1603 aaPredicted RBP16.82■□□□□ 0.28
SFXN1-201ENST00000321442 ZC3H4Q9UPT8 1303 aaKnown RBP16.82■□□□□ 0.28
SFXN1-201ENST00000321442 IGLV3-22A0A075B6J6 115 aa16.82■□□□□ 0.28
SFXN1-201ENST00000321442 BTBD19C9JJ37 291 aa16.82■□□□□ 0.28
SFXN1-201ENST00000321442 PHGDHO43175 533 aaKnown RBP16.82■□□□□ 0.28
SFXN1-201ENST00000321442 ITGAVP06756 1048 aa16.82■□□□□ 0.28
SFXN1-201ENST00000321442 GP5P40197 560 aa16.82■□□□□ 0.28
SFXN1-201ENST00000321442 ACVR2BQ13705 512 aa16.82■□□□□ 0.28
SFXN1-201ENST00000321442 BBS12Q6ZW61 710 aa16.82■□□□□ 0.28
SFXN1-201ENST00000321442 RIOX2Q8IUF8 465 aa16.82■□□□□ 0.28
SFXN1-201ENST00000321442 KIAA0319LQ8IZA0 1049 aa16.82■□□□□ 0.28
SFXN1-201ENST00000321442 ZMYND8Q9ULU4 1186 aaPredicted RBP16.82■□□□□ 0.28
SFXN1-201ENST00000321442 ACOT9Q9Y305 439 aa16.82■□□□□ 0.28
SFXN1-201ENST00000321442 ADGRA2Q96PE1 1338 aa16.82■□□□□ 0.28
SFXN1-201ENST00000321442 TPP1O14773 563 aa16.82■□□□□ 0.28
SFXN1-201ENST00000321442 NFKBIAP25963 317 aa16.82■□□□□ 0.28
SFXN1-201ENST00000321442 PTPN7P35236 360 aa16.82■□□□□ 0.28
SFXN1-201ENST00000321442 USP4Q13107 963 aa16.82■□□□□ 0.28
SFXN1-201ENST00000321442 TLK2Q86UE8 772 aa16.82■□□□□ 0.28
SFXN1-201ENST00000321442 CLVS1Q8IUQ0 354 aaPredicted RBP16.82■□□□□ 0.28
SFXN1-201ENST00000321442 ULK4Q96C45 1275 aa16.82■□□□□ 0.28
SFXN1-201ENST00000321442 TUBGCP3Q96CW5 907 aa16.82■□□□□ 0.28
SFXN1-201ENST00000321442 L3MBTL3Q96JM7 780 aaPredicted RBP16.82■□□□□ 0.28
SFXN1-201ENST00000321442 SP110Q9HB58 689 aa16.82■□□□□ 0.28
SFXN1-201ENST00000321442 CHCHD3Q9NX63 227 aaKnown RBP16.82■□□□□ 0.28
SFXN1-201ENST00000321442 HACD3Q9P035 362 aa16.82■□□□□ 0.28
SFXN1-201ENST00000321442 NOCTQ9UK39 431 aaKnown RBP16.82■□□□□ 0.28
SFXN1-201ENST00000321442 ZNF23P17027 643 aa16.81■□□□□ 0.28
SFXN1-201ENST00000321442 ME2P23368 584 aa16.81■□□□□ 0.28
SFXN1-201ENST00000321442 ACAT1P24752 427 aaKnown RBP16.81■□□□□ 0.28
SFXN1-201ENST00000321442 GRIK4Q16099 956 aa16.81■□□□□ 0.28
SFXN1-201ENST00000321442 C4orf22Q6V702 233 aa16.81■□□□□ 0.28
SFXN1-201ENST00000321442 RMDN1Q96DB5 314 aa16.81■□□□□ 0.28
SFXN1-201ENST00000321442 LGALS2P05162 132 aa16.81■□□□□ 0.28
SFXN1-201ENST00000321442 HMBSP08397 361 aa16.81■□□□□ 0.28
SFXN1-201ENST00000321442 CSHL1Q14406 222 aa16.81■□□□□ 0.28
SFXN1-201ENST00000321442 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.81■□□□□ 0.28
SFXN1-201ENST00000321442 ATPAF2Q8N5M1 289 aa16.81■□□□□ 0.28
SFXN1-201ENST00000321442 MMADHCQ9H3L0 296 aaPredicted RBP16.81■□□□□ 0.28
SFXN1-201ENST00000321442 ZNF214Q9UL59 606 aaPredicted RBP16.81■□□□□ 0.28
SFXN1-201ENST00000321442 MICAL2O94851 1124 aa16.81■□□□□ 0.28
SFXN1-201ENST00000321442 TNFAIP8O95379 198 aa16.81■□□□□ 0.28
SFXN1-201ENST00000321442 ACO1P21399 889 aaKnown RBP16.81■□□□□ 0.28
SFXN1-201ENST00000321442 NRLP54845 237 aa16.81■□□□□ 0.28
SFXN1-201ENST00000321442 LBX2Q6XYB7 198 aa16.81■□□□□ 0.28
SFXN1-201ENST00000321442 RINLQ6ZS11 566 aa16.81■□□□□ 0.28
SFXN1-201ENST00000321442 NET1Q7Z628 596 aaPredicted RBP16.81■□□□□ 0.28
SFXN1-201ENST00000321442 BRSK2Q8IWQ3 736 aa16.81■□□□□ 0.28
SFXN1-201ENST00000321442 DDHD1Q8NEL9 900 aa16.81■□□□□ 0.28
SFXN1-201ENST00000321442 EBF2Q9HAK2 575 aa16.81■□□□□ 0.28
SFXN1-201ENST00000321442 ETNK2Q9NVF9 386 aa16.81■□□□□ 0.28
SFXN1-201ENST00000321442 STRCQ7RTU9 1775 aa16.81■□□□□ 0.28
SFXN1-201ENST00000321442 FZD9O00144 591 aa16.81■□□□□ 0.28
SFXN1-201ENST00000321442 TIMM44O43615 452 aa16.81■□□□□ 0.28
SFXN1-201ENST00000321442 PIGNO95427 931 aa16.81■□□□□ 0.28
SFXN1-201ENST00000321442 ALDH1A3P47895 512 aa16.81■□□□□ 0.28
SFXN1-201ENST00000321442 CLK2P49760 499 aaKnown RBP16.81■□□□□ 0.28
SFXN1-201ENST00000321442 ARHGDIAP52565 204 aa16.81■□□□□ 0.28
SFXN1-201ENST00000321442 MPP2Q14168 576 aa16.81■□□□□ 0.28
SFXN1-201ENST00000321442 POU6F1Q14863 301 aa16.81■□□□□ 0.28
SFXN1-201ENST00000321442 IMPG1Q17R60 797 aa16.81■□□□□ 0.28
SFXN1-201ENST00000321442 FNBP1LQ5T0N5 605 aa16.81■□□□□ 0.28
SFXN1-201ENST00000321442 NAPEPLDQ6IQ20 393 aa16.81■□□□□ 0.28
SFXN1-201ENST00000321442 PLEKHA7Q6IQ23 1121 aa16.81■□□□□ 0.28
SFXN1-201ENST00000321442 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.81■□□□□ 0.28
SFXN1-201ENST00000321442 ZNF560Q96MR9 790 aa16.81■□□□□ 0.28
SFXN1-201ENST00000321442 EGFL8Q99944 293 aa16.81■□□□□ 0.28
SFXN1-201ENST00000321442 ATXN3LQ9H3M9 355 aa16.81■□□□□ 0.28
SFXN1-201ENST00000321442 CICQ96RK0 1608 aaPredicted RBP16.8■□□□□ 0.28
SFXN1-201ENST00000321442 TMEM191CA6NGB0 347 aa16.8■□□□□ 0.28
SFXN1-201ENST00000321442 CAPN8A6NHC0 703 aa16.8■□□□□ 0.28
SFXN1-201ENST00000321442 GOLGA8CPA6NN73 597 aa16.8■□□□□ 0.28
SFXN1-201ENST00000321442 E5RI56 91 aa16.8■□□□□ 0.28
SFXN1-201ENST00000321442 TBX10O75333 385 aa16.8■□□□□ 0.28
SFXN1-201ENST00000321442 WFS1O76024 890 aa16.8■□□□□ 0.28
SFXN1-201ENST00000321442 HSPA13P48723 471 aa16.8■□□□□ 0.28
SFXN1-201ENST00000321442 PPIL2Q13356 520 aa16.8■□□□□ 0.28
SFXN1-201ENST00000321442 ADAM32Q8TC27 787 aa16.8■□□□□ 0.28
SFXN1-201ENST00000321442 HTR3CQ8WXA8 447 aa16.8■□□□□ 0.28
SFXN1-201ENST00000321442 BSNDQ8WZ55 320 aa16.8■□□□□ 0.28
SFXN1-201ENST00000321442 CEP19Q96LK0 163 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms